Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E12
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   319   1e-87
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...   123   1e-28
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    31   0.78 
L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    30   2.4  
AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical ...    29   3.2  
U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical ...    28   9.6  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  319 bits (784), Expect = 1e-87
 Identities = 156/249 (62%), Positives = 194/249 (77%), Gaps = 1/249 (0%)
 Frame = +1

Query: 79  MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 258
           MS L+QLK  S VVADTGDF A+KE++PTDATTNPSLIL+A+ MEQY  ++D+++ Y K+
Sbjct: 1   MSVLEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKE 60

Query: 259 NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 438
           + S  +E +   +D L V+FG EILK IPGRVS EVDARLSFD  ASI +A+  I  + +
Sbjct: 61  HASGHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEK 120

Query: 439 HGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFVG 618
            GI K+RILIKLASTWEGI+AAK LE KHGIHCN+TLLF+  QA+ACAE+ VTLISPFVG
Sbjct: 121 EGISKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVG 180

Query: 619 RILDWYVEHT-KKTYEGKEXPGVVSVTKIYNYYKKFGYXTQVMGCHPFRNTGEIRELXGC 795
           RI+DW+V++T +K Y  K+ PGVVSVT+I+NYYKK+ Y TQVM    FRNT EI+ L GC
Sbjct: 181 RIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYKKYDYKTQVMAA-SFRNTEEIKGLVGC 239

Query: 796 DC*PISPQI 822
           D   ISP +
Sbjct: 240 DLLTISPAL 248


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score =  123 bits (297), Expect = 1e-28
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +1

Query: 541 LTLLFSLYQAIACAEANVTLISPFVGRILDWYVEHT-KKTYEGKEXPGVVSVTKIYNYYK 717
           +TLLF+  QA+ACAE+ VTLISPFVGRI+DW+V++T +K Y  K+ PGVVSVT+I+NYYK
Sbjct: 1   MTLLFNFEQAVACAESGVTLISPFVGRIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYK 60

Query: 718 KFGYXTQVMGCHPFRNTGEIRELXGCDC*PISPQI 822
           K+ Y TQVM    FRNT EI+ L GCD   ISP +
Sbjct: 61  KYDYKTQVMAA-SFRNTEEIKGLVGCDLLTISPAL 94


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 256 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSV-EVDARLSFDKDASIAKAIKFINLF 432
           D  S++ E++ E    ++++      +    +V + E  A+L+ +KD  I K  + I L 
Sbjct: 218 DPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLN-EKDLVIEKITRKIELL 276

Query: 433 AEHGIKKERILIKLASTWEGIQAAKELEK 519
            E+ +KK++ + +L   +E     K L+K
Sbjct: 277 QENNVKKDQRIYELEQCFESEDYCKILQK 305


>L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical
           protein C06G4.5 protein.
          Length = 436

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +1

Query: 460 ILIKLASTWEGIQAAKELEK-KHGIHCNLTLLFSLYQAIACAEANVTLISPFVGRILDWY 636
           I++    T  G+    ++EK    I   +   F++YQ I C    + LI+ F  ++L   
Sbjct: 200 IILYAKETAPGMLTRMKIEKCTVDIDSQMFTAFTIYQFILCYCTPLVLIAFFYTKLLSKL 259

Query: 637 VEHTKKTYEGKEXP 678
            EHT +T++  + P
Sbjct: 260 REHT-RTFKSSQIP 272


>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
            protein H43E16.1 protein.
          Length = 1203

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 109  NVV*VDLRHSFSSVSYQFTAHTQILRIPYSE 17
            NVV     + ++SV+Y FT+ TQ + +PY +
Sbjct: 1040 NVVNFVTNNLYNSVNYDFTSTTQAINVPYGQ 1070


>AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical
           protein Y73B3A.2 protein.
          Length = 97

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 757 FRNTGEIRELXGCDC*PISPQI 822
           FRNT EI+ L GCD   ISP +
Sbjct: 5   FRNTEEIKGLVGCDLLTISPAL 26


>U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical
           protein T25G12.5 protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
 Frame = +1

Query: 139 EAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDN---GSSIEEQVAETLDMLS 309
           E  K    T   T P++   A G+      LD A +Y  +    G+ I      +  +  
Sbjct: 255 EGFKVAMKTFDKTRPTVAALATGVAY--RCLDVATQYSLERKAFGTQIANHQGVSFLLAE 312

Query: 310 VLFGCEILKIIPGRVSVEVDARLSFDKDASIAK 408
           +   CE+ +++  +   EVDA       ASIAK
Sbjct: 313 MAINCELARLMTYKSGAEVDAGRPGSYYASIAK 345


>AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical
           protein F56C3.8 protein.
          Length = 69

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 452 FLIPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFNI 327
           F++    N ++ LI      SL +D L   +TD +PG++  +
Sbjct: 5   FIVTKMKNTVLLLILALFFISLRDDGLQMPNTDLKPGLLMQM 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,697,056
Number of Sequences: 27780
Number of extensions: 429419
Number of successful extensions: 1236
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)