Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E10
(844 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 267 3e-70
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 235 1e-60
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 156 6e-37
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 155 1e-36
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 146 6e-34
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 124 4e-27
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 7e-17
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 90 7e-17
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 86 9e-16
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 67 5e-10
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 66 1e-09
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 63 7e-09
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 63 7e-09
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 63 1e-08
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 61 3e-08
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 60 7e-08
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 59 2e-07
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 58 2e-07
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 58 2e-07
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 56 1e-06
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 54 4e-06
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 54 6e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 51 4e-05
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 50 6e-05
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 50 7e-05
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 49 2e-04
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 47 5e-04
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 47 7e-04
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 46 0.001
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 46 0.001
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 46 0.001
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 46 0.002
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 46 0.002
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 44 0.004
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 42 0.026
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 41 0.034
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 41 0.045
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 39 0.18
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 38 0.42
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 36 1.3
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 35 2.9
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 35 2.9
UniRef50_A1BIV6 Cluster: ABC-2 type transporter; n=1; Chlorobium... 33 9.0
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 267 bits (654), Expect = 3e-70
Identities = 126/143 (88%), Positives = 134/143 (93%)
Frame = +1
Query: 88 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 267
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 268 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 447
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 448 KVVKVANVSLLALYKEKKERPRS 516
KVVKVANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 235 bits (575), Expect = 1e-60
Identities = 108/142 (76%), Positives = 126/142 (88%)
Frame = +1
Query: 91 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQ 270
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 271 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 450
PNSAIRKCVRVQLIKNGKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 451 VVKVANVSLLALYKEKKERPRS 516
VVKV+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 156 bits (379), Expect = 6e-37
Identities = 76/139 (54%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Frame = +1
Query: 97 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 276
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 277 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 453
+A+RKCVRVQL+KNGK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKV 126
Query: 454 VKVANVSLLALYKEKKERP 510
+KV VSL A+++ KK++P
Sbjct: 127 IKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 155 bits (377), Expect = 1e-36
Identities = 74/132 (56%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Frame = +1
Query: 118 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 297
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 298 RVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVS 474
R+QLIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGVRF+V KV +VS
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVS 128
Query: 475 LLALYKEKKERP 510
L + K+++P
Sbjct: 129 LEEMVAGKRDKP 140
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 146 bits (354), Expect = 6e-34
Identities = 66/98 (67%), Positives = 76/98 (77%)
Frame = +1
Query: 94 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQP 273
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 274 NSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 387
NSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 133 NSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 124 bits (298), Expect = 4e-27
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = -3
Query: 524 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSR 345
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 344 GTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 225
GT AVTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 7e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +1
Query: 379 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 516
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 89.8 bits (213), Expect = 7e-17
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 468
CVRVQL KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 469 VSLLALYKEKKERP 510
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +1
Query: 97 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPN 276
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 277 SAIRKCVRVQLIKN 318
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 86.2 bits (204), Expect = 9e-16
Identities = 47/134 (35%), Positives = 73/134 (54%)
Frame = -2
Query: 489 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLN 310
++S++R++GYF HLK +S ++T +TF+T+S + + A + G E L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLN 67
Query: 309 ELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVV 130
EL+ DA DGR+ L F + ++LC+R +R+ L VGFL FV P L +V
Sbjct: 68 ELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVT 127
Query: 129 HVLTRRSYSSGFTH 88
L S ++ H
Sbjct: 128 AELPGSSETTTLAH 141
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 67.3 bits (157), Expect = 5e-10
Identities = 40/115 (34%), Positives = 56/115 (48%)
Frame = -2
Query: 417 VTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLED 238
+TF+T+S + A + G E L VLNEL+ DA DGR+ L F +
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 237 DALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVHVLTRRSYSSGFTHLDSTT 73
++LC+R T +R+ L VGFL FV P L +V L S ++ HL T
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHLAGAT 115
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 66.1 bits (154), Expect = 1e-09
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +1
Query: 202 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEND 381
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G ++++E++
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHN 139
Query: 382 EVLVAGFGRKGHAVGDIPGVRFKVVK 459
VL R G D+PGV+ K V+
Sbjct: 140 IVLC----RVGRC-RDVPGVKIKCVR 160
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 63.3 bits (147), Expect = 7e-09
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +1
Query: 205 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 384
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 385 VLVAGFGRKGHAVGDIPGVRFKVVK 459
VLV G GR D+PGV+ K+V+
Sbjct: 119 VLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 63.3 bits (147), Expect = 7e-09
Identities = 39/94 (41%), Positives = 59/94 (62%)
Frame = +1
Query: 178 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 357
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 358 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 459
++++E++ VLV GR + D PGV+ K V+
Sbjct: 70 GHNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 98
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 62.9 bits (146), Expect = 1e-08
Identities = 38/92 (41%), Positives = 58/92 (63%)
Frame = +1
Query: 190 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 369
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74
Query: 370 EENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 465
+E+ VLV G GR V D+PGVR+K+++ A
Sbjct: 75 QEHSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 61.3 bits (142), Expect = 3e-08
Identities = 42/137 (30%), Positives = 69/137 (50%)
Frame = -2
Query: 543 QVTYHNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXX 364
Q++Y L W + F+ + R+ G F L+ ++ +++D V+ ++E
Sbjct: 3 QISYQQSALLDWLVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCE 62
Query: 363 X*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRT 184
TV+ +E HFL VL EL++DA ++G V LL F + DDA C +E + L R
Sbjct: 63 SKTTVSWNESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR- 121
Query: 183 HVGFLEFFVRPSLFTTV 133
H F + PSL ++V
Sbjct: 122 HC-FNVSCIVPSLLSSV 137
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 60.1 bits (139), Expect = 7e-08
Identities = 33/79 (41%), Positives = 56/79 (70%)
Frame = +1
Query: 229 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 408
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ VLV G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 409 KGHAVGDIPGVRFKVVKVA 465
V D+PGV++ +V+ A
Sbjct: 146 ----VQDVPGVKYHLVRGA 160
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 58.8 bits (136), Expect = 2e-07
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Frame = +1
Query: 55 PSVADWCRAIQMGKPRGIRT-ARKHVNHRREQRWADKEFKKAHMGTKWKANP--FGGASH 225
P+ A + R + M R + R + R + ++ + A TK K++ G
Sbjct: 21 PAKAAFARPVAMPVFRPATSFGRGFASSSRCEATINQIMRGARKSTKRKSSVPLLDGCFQ 80
Query: 226 AKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFG 405
K + + + ++PNSA+RK RV+L NG+ TA++P +G ++++E+ VLV G G
Sbjct: 81 KKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVRGGG 137
Query: 406 RKGHAVGDIPGVRFKVVK 459
K D+PGVR+K+V+
Sbjct: 138 AK-----DLPGVRYKIVR 150
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/94 (36%), Positives = 59/94 (62%)
Frame = +1
Query: 178 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 357
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 358 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 459
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 113 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 141
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/94 (36%), Positives = 59/94 (62%)
Frame = +1
Query: 178 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 357
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 358 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 459
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 127
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +1
Query: 178 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 357
H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 358 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 459
++++E++ +++ GR V D PGV+ K V+
Sbjct: 117 GHNLQEHN-IVLCRVGR----VQDCPGVKIKCVR 145
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 54.0 bits (124), Expect = 4e-06
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 196 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 375
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 376 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 459
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 53.6 bits (123), Expect = 6e-06
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +1
Query: 190 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 369
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74
Query: 370 EENDEVLVAGFGRKGHAVGDIPGVRFKVVK 459
+E+ VLV G GR V D+PGVR+ +V+
Sbjct: 75 QEHAVVLVRG-GR----VKDLPGVRYHIVR 99
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +1
Query: 379 DEVLVAGFGRKGHAVGDIPGVRFKVVK 459
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 214 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 393
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 394 AGFGRK 411
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 50.4 bits (115), Expect = 6e-05
Identities = 29/97 (29%), Positives = 60/97 (61%)
Frame = +1
Query: 169 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 348
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 349 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 459
+G + +++++ VL+ +KG V D+PG+++KV++
Sbjct: 68 EG--HALQDHNFVLI----KKGR-VQDLPGIKYKVIR 97
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 50.0 bits (114), Expect = 7e-05
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +1
Query: 229 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 408
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G + +E+ V V G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
Query: 409 KGHAVGDIPGVRFKVVKVA 465
D+PGV++ V++ A
Sbjct: 115 ----CQDLPGVKYHVIRGA 129
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 48.8 bits (111), Expect = 2e-04
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +1
Query: 214 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 393
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G ++ +E+ VL+
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 394 AGFGRKGHAVGDIPGVRFKVVK 459
G GR D PGV++ VV+
Sbjct: 104 RG-GR----AQDCPGVQYHVVR 120
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 47.2 bits (107), Expect = 5e-04
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 247 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAV 423
+VG+ + K+PNS RK RV+L GK +TA++P +G ++I+++ VLV G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 424 GDIPGVRFKVVKVA 465
D PGVR+ +V+ A
Sbjct: 101 QDCPGVRYHLVRGA 114
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 47.2 bits (107), Expect = 5e-04
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +1
Query: 196 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 375
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 376 NDEVLVAGFGRKGHAVGDIPGVRFKVV 456
+D VLV +G V D+PGV++ +V
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 46.8 bits (106), Expect = 7e-04
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = +1
Query: 229 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 408
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V+ G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 409 KGHAVGDIPGVRFKVVK 459
V D PG+++K+++
Sbjct: 92 ----VQDCPGIKYKIIR 104
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +1
Query: 265 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 444
K+PNSA+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 445 FKVV 456
+KV+
Sbjct: 94 YKVI 97
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 46.0 bits (104), Expect = 0.001
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +1
Query: 169 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 348
+K K + G KG+ L+ + K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148
Query: 349 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 447
+G ++I+++ VL+ G GR D PGVR+
Sbjct: 149 EG--HNIQQHSVVLIRG-GR----AQDCPGVRY 174
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 46.0 bits (104), Expect = 0.001
Identities = 37/109 (33%), Positives = 56/109 (51%)
Frame = +1
Query: 187 TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 366
TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G +
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73
Query: 367 IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPR 513
++E+ VLV G GR V D+PGV++ V+ L A+ KK R +
Sbjct: 74 LQEHSLVLVRG-GR----VKDLPGVQYHFVR-GVYDLHAVGTRKKSRSK 116
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 45.6 bits (103), Expect = 0.002
Identities = 37/127 (29%), Positives = 64/127 (50%)
Frame = +1
Query: 79 AIQMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGV 258
A ++ + G T + + H RE++ H + +A G +G+ L
Sbjct: 55 AFRLPQSSGFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTR 103
Query: 259 EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 438
K+PNSA+ K +V+L N V A++P +G ++++E+ VLV G GR V D+PG
Sbjct: 104 TPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPG 155
Query: 439 VRFKVVK 459
V+F ++
Sbjct: 156 VKFHCIR 162
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 45.6 bits (103), Expect = 0.002
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +1
Query: 214 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 393
G KG+ ++ V+ K+PNSA RK +++L + + A++P G ++++E VLV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 394 AGFGRKGHAVGDIPGVRFKVVK 459
+G GR D+PGVR+ ++K
Sbjct: 83 SG-GR----APDLPGVRYTLIK 99
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 44.4 bits (100), Expect = 0.004
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +1
Query: 232 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 411
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ VL+ G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 412 GHAVGDIPGVRFKVVK 459
V D+PGV+F ++
Sbjct: 87 ---VKDLPGVKFHCIR 99
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 41.5 bits (93), Expect = 0.026
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 214 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 393
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + VLV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 394 AGFGRKGHAVGDIPGVRFKVVK 459
G GR D+ G +KVV+
Sbjct: 184 RG-GR----CQDVSGCHYKVVR 200
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 41.1 bits (92), Expect = 0.034
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +1
Query: 229 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 408
+G + + + K+PNSA RK ++L KN KK+ A++P G + + + VL+ G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 409 KGHAVGDIPGVRFKVV 456
+ D+PGV K+V
Sbjct: 85 R-----DLPGVNHKIV 95
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 40.7 bits (91), Expect = 0.045
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +1
Query: 265 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 444
K+PNSA+RK +V+L N V +P +G ++++E+ +L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 445 FKVVKVANVSLLALYKEKKERPR 513
+K V+ + L + K K R +
Sbjct: 98 YKAVR-GVLDLAGVQKRKTARSK 119
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 38.7 bits (86), Expect = 0.18
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +1
Query: 265 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 444
K+ NSA+RK RV+L +G ++T ++P G ++ +E+ VLV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 445 FKVVK 459
+ +V+
Sbjct: 228 YHIVR 232
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 37.5 bits (83), Expect = 0.42
Identities = 32/108 (29%), Positives = 53/108 (49%)
Frame = +1
Query: 184 GTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLN 363
G K +NP K I L+ + + K+PNSA R+ +V+ +K +T +P G +
Sbjct: 22 GKKLNSNP-----QRKVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKH 74
Query: 364 HIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 507
+++++ VL+ G GR D+ GV K V+ LL + K R
Sbjct: 75 NLQQHSTVLICG-GRS----KDLIGVHLKAVR-GKFDLLGVNGRKSSR 116
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 35.9 bits (79), Expect = 1.3
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +1
Query: 229 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 408
+G VL+ V K+PNSA R + +L N K V A +P G +++ ++ +LV G G
Sbjct: 31 EGSVLKPRIVTPKKPNSARRPVAKAKL-TNKKFVVAHIPGTG--HNLRKHSTILVRGGGC 87
Query: 409 KGHAVGDIPGVRFKVVK 459
+ D+PGVR ++
Sbjct: 88 R-----DLPGVRHTCIR 99
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 34.7 bits (76), Expect = 2.9
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +1
Query: 310 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 489
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 490 KEKKERPRS 516
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 34.7 bits (76), Expect = 2.9
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +1
Query: 229 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 408
+G+ L K+PNSA+RK +V+L N + A +P +G ++ +E+ VLV G GR
Sbjct: 63 QGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRG-GR 118
Query: 409 KGHAVGDIPGVR 444
V D PG R
Sbjct: 119 ----VKDSPGKR 126
>UniRef50_A1BIV6 Cluster: ABC-2 type transporter; n=1; Chlorobium
phaeobacteroides DSM 266|Rep: ABC-2 type transporter -
Chlorobium phaeobacteroides (strain DSM 266)
Length = 260
Score = 33.1 bits (72), Expect = 9.0
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -2
Query: 234 ALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVHVLTRRSYSSGFTHLDSTTPIGYGW 55
AL +R T R R ++GFL F+ P+LFT ++ ++ + + T + T G+
Sbjct: 17 ALLMRETITRYG---RNNIGFLWLFIEPALFTVMITIVWHFTRAGRVTGIPITAMAVTGY 73
Query: 54 EKKQILRN 31
Q+ RN
Sbjct: 74 ASIQLWRN 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,308,057
Number of Sequences: 1657284
Number of extensions: 15955523
Number of successful extensions: 35170
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 34011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35073
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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