Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E07
(827 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 244 2e-63
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 227 3e-58
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 202 1e-50
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 175 1e-42
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 165 9e-40
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 143 4e-33
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 138 2e-31
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 137 3e-31
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 137 3e-31
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 132 1e-29
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 127 4e-28
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 107 4e-22
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 94 4e-18
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 88 3e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 87 7e-16
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 78 2e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 69 2e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 63 7e-09
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 60 5e-08
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 58 2e-07
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 58 3e-07
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 58 4e-07
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 55 2e-06
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 53 1e-05
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 53 1e-05
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 50 7e-05
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 49 1e-04
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 48 3e-04
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 46 0.001
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 44 0.004
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 44 0.005
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 40 0.058
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 40 0.058
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 40 0.076
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 38 0.23
UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;... 36 1.6
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 5.0
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 8.7
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 244 bits (598), Expect = 2e-63
Identities = 115/155 (74%), Positives = 136/155 (87%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 591
MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 592 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
I R++T+++L+ VV KL+PDSIAKDIEKAC + P
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYP 209
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 34 KAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
Score = 37.9 bits (84), Expect = 0.31
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPFTRKDWYDVKA
Sbjct: 21 VVDPFTRKDWYDVKA 35
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 227 bits (554), Expect = 3e-58
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 2.2
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 6.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 202 bits (492), Expect = 1e-50
Identities = 100/155 (64%), Positives = 121/155 (78%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 591
+V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 592 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
+T T+ +L+E+V K IP+SI ++IEKA I P
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSIYP 601
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 175 bits (425), Expect = 1e-42
Identities = 85/154 (55%), Positives = 113/154 (73%)
Frame = +1
Query: 235 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 414
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 415 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 594
+V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 595 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
R+ + L+++ NKLIP+ I ++IEKA GI P
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGIYP 206
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 165 bits (402), Expect = 9e-40
Identities = 82/142 (57%), Positives = 110/142 (77%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 591
++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 592 ITRDVTNSELREVVNKLIPDSI 657
+T V++++L+ VV+ LI S+
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSL 192
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 143 bits (347), Expect = 4e-33
Identities = 83/205 (40%), Positives = 116/205 (56%), Gaps = 11/205 (5%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 561
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 562 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P-------SARCL-HP 717
RAIR+K+ IT + + E LI + K IEK I P + L P
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRP 227
Query: 718 KXESVEXAPLSEISKXDGTFTGESG 792
K ++ + A L K TG G
Sbjct: 228 KLDATKIAELYSHEKKGEKATGRDG 252
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 138 bits (333), Expect = 2e-31
Identities = 67/155 (43%), Positives = 103/155 (66%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 591
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 592 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
+ ++V+ + +++ +S+AK+I KA I P
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFP 205
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 137 bits (332), Expect = 3e-31
Identities = 71/146 (48%), Positives = 99/146 (67%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 591
+VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 592 ITRDVTNSELREVVNKLIPDSIAKDI 669
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 137 bits (332), Expect = 3e-31
Identities = 70/143 (48%), Positives = 92/143 (64%)
Frame = +1
Query: 319 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 498
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 499 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 678
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 679 CHGI*PSARCLHPKXESVEXAPL 747
I P + L K + ++ L
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPKL 148
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 132 bits (318), Expect = 1e-29
Identities = 58/155 (37%), Positives = 100/155 (64%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 591
+++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 592 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
I R ++ +++E V+ L + ++ + + C+ I P
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILP 209
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 127 bits (306), Expect = 4e-28
Identities = 74/156 (47%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQVRAIRKKMCE 588
V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 589 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
I+ D ++L+EV+NKL+PD++ KD+EKAC I P
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYP 189
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 107 bits (256), Expect = 4e-22
Identities = 55/170 (32%), Positives = 96/170 (56%)
Frame = +1
Query: 259 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 438
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 618
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 619 LREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAPLSEISKXD 768
+++++ KL +++ K IE+ I P C K ++++ + + + +
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIKSHQTASVGQQE 182
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 93.9 bits (223), Expect = 4e-18
Identities = 51/168 (30%), Positives = 90/168 (53%)
Frame = +1
Query: 244 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 423
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 424 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 603
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 604 VTNSELREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAPL 747
N ++++ ++++ I + IE C I P + K + VE + L
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVENSTL 219
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/136 (33%), Positives = 74/136 (54%)
Frame = +1
Query: 235 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 414
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 415 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 594
+ +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Query: 595 TRDVTNSELREVVNKL 642
++ + +V KL
Sbjct: 173 HNELGKVSIPVLVTKL 188
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 86.6 bits (205), Expect = 7e-16
Identities = 48/152 (31%), Positives = 82/152 (53%)
Frame = +1
Query: 235 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 414
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 415 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 594
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 595 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 690
T + + ++ + + I +I + C I
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQI 200
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/87 (54%), Positives = 59/87 (67%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTD 471
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +1
Query: 568 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC I P
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYP 153
Score = 33.1 bits (72), Expect = 8.7
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDV A
Sbjct: 21 VVDPFSKKDWYDVNA 35
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 391 LTTD 402
L+ D
Sbjct: 105 LSCD 108
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 63.3 bits (147), Expect = 7e-09
Identities = 47/158 (29%), Positives = 77/158 (48%)
Frame = +1
Query: 259 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 438
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 618
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 619 LREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESV 732
E +N+++ +A +I K I P R K E V
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIYPLRRVEIGKSELV 190
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 60.5 bits (140), Expect = 5e-08
Identities = 44/164 (26%), Positives = 78/164 (47%)
Frame = +1
Query: 262 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 441
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 442 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 621
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 622 REVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAPLSE 753
+ + +++ ++A D+ I P + K + ++ P E
Sbjct: 164 GQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYPPEEE 207
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 58.4 bits (135), Expect = 2e-07
Identities = 45/149 (30%), Positives = 70/149 (46%)
Frame = +1
Query: 259 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 438
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 618
I+ +V+T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 619 LREVVNKLIPDSIAKDIEKACHGI*PSAR 705
E V +I D +++ K I P R
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIYPVRR 186
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 58.0 bits (134), Expect = 3e-07
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Frame = +1
Query: 247 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 426
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 427 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 606
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 607 TNSELREVVNKLI----PDSIAKDIEKACHGI*PSARCLHPKXESVE 735
+ E + + + +SI + I++A I P + K E +E
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLE 189
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 57.6 bits (133), Expect = 4e-07
Identities = 47/164 (28%), Positives = 81/164 (49%)
Frame = +1
Query: 253 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 432
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 433 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 612
+ I+AN+DV+T DG+V+RV FT K A+ +Q++AIR+ M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 613 SELREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAP 744
++ + + I ++ I + I P R + + VE P
Sbjct: 152 TDFETFMQEAILGRLSAAIYRQAKFIYPLRR-VEIRKTQVEAMP 194
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 55.2 bits (127), Expect = 2e-06
Identities = 42/149 (28%), Positives = 69/149 (46%)
Frame = +1
Query: 259 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 438
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 618
IE +DV T DGY LRV + FT + + KT +Q RAIR M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 619 LREVVNKLIPDSIAKDIEKACHGI*PSAR 705
+ + + + + +I K I P R
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIYPIRR 185
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 52.8 bits (121), Expect = 1e-05
Identities = 44/167 (26%), Positives = 74/167 (44%)
Frame = +1
Query: 253 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 432
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 433 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 612
+ I A ++V+T DG+ +RV + T + KT IR +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKE 157
Query: 613 SELREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAPLSE 753
+ E V+ ++ + I C + P R K E +E +E
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIEFGKAAE 204
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 52.8 bits (121), Expect = 1e-05
Identities = 39/131 (29%), Positives = 63/131 (48%)
Frame = +1
Query: 253 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 432
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 433 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 612
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 613 SELREVVNKLI 645
S L E++ ++
Sbjct: 149 STLDELIQLMV 159
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 50.0 bits (114), Expect = 7e-05
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = +1
Query: 247 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 426
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 427 WQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 603
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 604 VTNSELREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXA 741
++ V+ ++ ++K + C I P R K ESV A
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPIFPVRRIEIIKSESVSSA 197
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 49.2 bits (112), Expect = 1e-04
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 1/169 (0%)
Frame = +1
Query: 259 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 438
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 615
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 616 ELREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAPLSEISK 762
E V ++I ++A +I I P R + V APL + K
Sbjct: 158 TFDEFVQEMIFGNLANNIFNEAKKIAP-LRKAEIEKSKVLFAPLIKEGK 205
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 48.0 bits (109), Expect = 3e-04
Identities = 40/172 (23%), Positives = 77/172 (44%)
Frame = +1
Query: 259 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 438
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 618
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 619 LREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAPLSEISKXDGT 774
++++ ++ ++ I I P R + K ++E P E++ + T
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIYPLRR-VEIKKTTLEARP-EEVAAEEET 200
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 46.0 bits (104), Expect = 0.001
Identities = 35/137 (25%), Positives = 62/137 (45%)
Frame = +1
Query: 259 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 438
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 618
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 619 LREVVNKLIPDSIAKDI 669
V+ ++ +++ I
Sbjct: 151 FESFVDAIVEGNLSSAI 167
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +1
Query: 241 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 420
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 421 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 513
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +1
Query: 256 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 435
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 436 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 534
+ +DVKT+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 40.3 bits (90), Expect = 0.058
Identities = 34/151 (22%), Positives = 67/151 (44%)
Frame = +1
Query: 253 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 432
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 433 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 612
+ I+A+ VKT D +++ + T T A+ +Q + +R+ + +++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAE 152
Query: 613 SELREVVNKLIPDSIAKDIEKACHGI*PSAR 705
E++ ++ +A ++ I P R
Sbjct: 153 KSFDELIKLVVNGKLASEVYHNAKKIYPLKR 183
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 40.3 bits (90), Expect = 0.058
Identities = 43/171 (25%), Positives = 71/171 (41%)
Frame = +1
Query: 244 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 423
S + RV EV +++L + FR+ +G F G + D +R +V+
Sbjct: 41 SNSMVNRVVEVPISELTGNFKKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVR 98
Query: 424 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 603
+ + I+ DVKT+D ++ V + T+ + +K IRK + + I
Sbjct: 99 RRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNK 149
Query: 604 VTNSELREVVNKLIPDSIAKDIEKACHGI*PSARCLHPKXESVEXAPLSEI 756
+ E V LI D I D+ A I P + K E V + +SEI
Sbjct: 150 GLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELVSLSGISEI 200
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 39.9 bits (89), Expect = 0.076
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 262 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 438
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 439 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 618
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 619 LREVVNKLIPDSIAKDIEKACHGI*P 696
+ + D I I++ + P
Sbjct: 178 IDFIYKICCSDVIGNSIKRRSKRVIP 203
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 38.3 bits (85), Expect = 0.23
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +1
Query: 634 NKLIPDSIAKDIEKACHGI*P 696
NKLIPDSI KDIEKAC I P
Sbjct: 1 NKLIPDSIGKDIEKACQSIYP 21
>UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;
Alphaproteobacteria|Rep: FAD linked oxidase domain
protein - Methylobacterium extorquens PA1
Length = 990
Score = 35.5 bits (78), Expect = 1.6
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -2
Query: 370 RAHYVLAHIRRLI*ICGKTFPRQCQLVDQPGKLRKLFPSILPKQFSXPWVRLTSVVPTCL 191
R H V+AH R CG+T+ Q + R+ ++LP F R+ + P+CL
Sbjct: 774 RLHRVIAHEGRRPLCCGRTYLASGQTDRAREEARRTLDTLLP--FVRAGARVVGLEPSCL 831
Query: 190 LLNIDGGLDIVP-IFASEWVDNLLL 119
L D L ++P ASE + LL
Sbjct: 832 LTFRDEFLSLLPRAEASELAQSALL 856
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 5.0
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 455 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 291
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 6.6
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +1
Query: 352 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 531
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 532 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 669
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 8.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 606 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 499
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 33.1 bits (72), Expect = 8.7
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -1
Query: 503 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 330
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 329 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVXLG 222
L + + SV + S R S L F P EA+++ +G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,720,660
Number of Sequences: 1657284
Number of extensions: 16732385
Number of successful extensions: 43421
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 41887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43393
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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