Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E07
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   243   6e-66
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           28   0.40 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        27   0.93 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   5.0  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   5.0  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  243 bits (594), Expect = 6e-66
 Identities = 116/167 (69%), Positives = 139/167 (83%)
 Frame = +1

Query: 196 KSAPRLSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCN 375
           +S   L    + TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL N
Sbjct: 43  QSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTN 102

Query: 376 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 555
           FHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+
Sbjct: 103 FHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHS 162

Query: 556 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
           Q++ IR KM  II R++T+++L+ VV KL+PDSIAKDIEKAC  + P
Sbjct: 163 QIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYP 209



 Score = 37.9 bits (84), Expect = 4e-04
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +2

Query: 128 IVDPFTRKDWYDVKA 172
           +VDPFTRKDWYDVKA
Sbjct: 21  VVDPFTRKDWYDVKA 35



 Score = 36.7 bits (81), Expect = 9e-04
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
           + P+MF  RQ G TLVNRTQG +     ++G+ F
Sbjct: 34  KAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVF 67


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 274 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 435
           V+LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +1

Query: 274 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 435
           V+LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 67  HGGREK*RPVEGR*KRC*EEDCRPIHSQRLVRCQGLRLCSARGKSAPRLSTV 222
           H      RP  GR +R   ED       ++V  +G  LC+A   +A   +T+
Sbjct: 124 HNRNSDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTLCAASSPNAYTNTTI 175


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +2

Query: 233 RKLLRKD*REEFSKFPWLIYKLTLTRKGLSAN 328
           ++ + +D R E+ +FPW++    L  +    N
Sbjct: 332 QRTINEDFRAEYGEFPWMVALFQLPEQRYCCN 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,581
Number of Sequences: 2352
Number of extensions: 17273
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)