Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E07
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 227 5e-59
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 227 5e-59
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 227 5e-59
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 227 5e-59
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 227 5e-59
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 227 bits (554), Expect = 5e-59
Identities = 113/162 (69%), Positives = 131/162 (80%)
Frame = +1
Query: 211 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 390
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 391 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 570
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 571 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYP 206
Score = 35.1 bits (77), Expect = 0.31
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 128 IVDPFTRKDWYDVKA 172
+VDPF++KDWYDVKA
Sbjct: 21 VVDPFSKKDWYDVKA 35
Score = 33.5 bits (73), Expect = 0.95
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 34 KAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,371,670
Number of Sequences: 237096
Number of extensions: 2618544
Number of successful extensions: 5949
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5932
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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