Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E07
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 186 2e-47
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.8
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 30 1.8
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 30 2.3
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 30 2.3
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 30 2.3
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 30 2.3
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 30 2.3
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 30 2.3
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 30 2.3
Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 186 bits (452), Expect = 2e-47
Identities = 95/155 (61%), Positives = 113/155 (72%)
Frame = +1
Query: 232 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 411
TKIASEGLKGRVFEVSL DL ++E FRKF+LIAE VQG+NVL NFH M +T DKL
Sbjct: 53 TKIASEGLKGRVFEVSLGDLN---NSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLC 109
Query: 412 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 591
+VKKW TLIEAN VKTTDGY LRVF I FT K +KT Y + +++R IR +M
Sbjct: 110 SIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGC 169
Query: 592 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*P 696
I ++VT +L+EVV+KLIPDSI KDIEK C + P
Sbjct: 170 IEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYP 204
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 168 RPPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 269
+ P+MF+ RQVG TL+NRTQG + ++G+ F
Sbjct: 32 KAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVF 65
Score = 33.1 bits (72), Expect = 0.25
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +2
Query: 131 VDPFTRKDWYDVKA 172
VDPF+RK+WYD+KA
Sbjct: 20 VDPFSRKEWYDIKA 33
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
C25G4.5 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -1
Query: 437 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 261
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 260 PFNPSEAI 237
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -1
Query: 449 LASMRVCHFLTIHLSLSVVRSMPWKLQ-STLRPCTY-SAINLNLRKDLSASVSACRSARE 276
+AS++ LT+ L L +P LQ L+P T S + + ++ S S S+ S+
Sbjct: 132 IASLQASSMLTVPL-LQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTSASSLFSSSS 190
Query: 275 TSKTLPFNPSEA 240
+S PF PSE+
Sbjct: 191 SSAFHPFRPSES 202
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -1
Query: 437 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 261
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 260 PFNPSEAI 237
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 532 KTCYAQ-HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*PSARC 708
K C + + Q+ +I K C++I D SEL + K + C + ++ C
Sbjct: 244 KVCESDSNNQIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRLSSTSNC 303
Query: 709 LHPKXESVEXAPLSEISK 762
+ +++ +P++E+++
Sbjct: 304 IPVMSTALQSSPVAEVNR 321
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 532 KTCYAQ-HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*PSARC 708
K C + + Q+ +I K C++I D SEL + K + C + ++ C
Sbjct: 270 KVCESDSNNQIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRLSSTSNC 329
Query: 709 LHPKXESVEXAPLSEISK 762
+ +++ +P++E+++
Sbjct: 330 IPVMSTALQSSPVAEVNR 347
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 532 KTCYAQ-HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*PSARC 708
K C + + Q+ +I K C++I D SEL + K + C + ++ C
Sbjct: 244 KVCESDSNNQIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRLSSTSNC 303
Query: 709 LHPKXESVEXAPLSEISK 762
+ +++ +P++E+++
Sbjct: 304 IPVMSTALQSSPVAEVNR 321
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 532 KTCYAQ-HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*PSARC 708
K C + + Q+ +I K C++I D SEL + K + C + ++ C
Sbjct: 270 KVCESDSNNQIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRLSSTSNC 329
Query: 709 LHPKXESVEXAPLSEISK 762
+ +++ +P++E+++
Sbjct: 330 IPVMSTALQSSPVAEVNR 347
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 532 KTCYAQ-HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*PSARC 708
K C + + Q+ +I K C++I D SEL + K + C + ++ C
Sbjct: 111 KVCESDSNNQIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRLSSTSNC 170
Query: 709 LHPKXESVEXAPLSEISK 762
+ +++ +P++E+++
Sbjct: 171 IPVMSTALQSSPVAEVNR 188
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 532 KTCYAQ-HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*PSARC 708
K C + + Q+ +I K C++I D SEL + K + C + ++ C
Sbjct: 244 KVCESDSNNQIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRLSSTSNC 303
Query: 709 LHPKXESVEXAPLSEISK 762
+ +++ +P++E+++
Sbjct: 304 IPVMSTALQSSPVAEVNR 321
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 532 KTCYAQ-HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI*PSARC 708
K C + + Q+ +I K C++I D SEL + K + C + ++ C
Sbjct: 270 KVCESDSNNQIVSICKHDCDVIQNDECPSELALAAQHELVGDTPKALFPLCSRLSSTSNC 329
Query: 709 LHPKXESVEXAPLSEISK 762
+ +++ +P++E+++
Sbjct: 330 IPVMSTALQSSPVAEVNR 347
>Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical
protein F49C5.3 protein.
Length = 551
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 505 TNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELRE---VVNKLIPDSIAKDIE 672
T + S+S + QH Q RA++K M E + V N ++ E VV K + D +I+
Sbjct: 198 TGRSSISAGFDVF-QHLQNRAVQKTMIEQLESAVRNQDVMEMGNVVKKGLEDGTLSEIQ 255
>Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical
protein B0001.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 253 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRN 363
L+G + +S+ D +A TD E S + R IAE+++ R+
Sbjct: 201 LRGCSWIMSVVDGKAQTDGEFSDKDLREIAEFIRERH 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,757,614
Number of Sequences: 27780
Number of extensions: 396245
Number of successful extensions: 1096
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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