Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E07
         (827 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   2.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   2.0  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   3.4  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   3.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 139 WVDNLLLNTFFTALRQAFIF 80
           +++++ LNT++  LRQAF F
Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 139 WVDNLLLNTFFTALRQAFIF 80
           +++++ LNT++  LRQAF F
Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 737 KPPFPRSXXLMEPSP 781
           KPP P+    +EPSP
Sbjct: 70  KPPGPKDLVYLEPSP 84


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 737 KPPFPRSXXLMEPSP 781
           KPP P+    +EPSP
Sbjct: 71  KPPGPKDLVYLEPSP 85


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 332 LNLRKDLSASVSACRSARE 276
           LNLR D+S+S S+  S+ E
Sbjct: 365 LNLRTDISSSSSSISSSEE 383


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 208 VVPTCLLLNIDGGLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDR 71
           V+P  LL  I G      I    WV   +L+   + L    I  DR
Sbjct: 94  VMPMALLYEISGNWSFGTIMCDLWVSFDVLSCTASILNLCMISVDR 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,444
Number of Sequences: 438
Number of extensions: 4470
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)