Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E06
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical p...    30   1.8  
U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    28   9.5  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    28   9.5  
AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK1320.12b protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 206 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 316
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK1320.12a protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 206 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 316
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical
           protein T12A2.15b protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 495 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 593
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152


>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 495 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 593
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 109 NYSGLHLWSVESCVLPKNGT 50
           NY+ LH W +ES + P N T
Sbjct: 60  NYNNLHYWLIESQLTPSNDT 79


>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
           protein C44H9.4 protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 486 AYGDGKDKTSPRVSWKLIALWENNK---VYFKILNTERNQYLVLGVGTNWNGDH 638
           ++G   +   PR  ++ I+ +   +    YF++L+ E N+Y+++    N +G H
Sbjct: 129 SWGPNFNSPKPRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLH 182


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 109 NYSGLHLWSVESCVLPKNGT 50
           NY+ LH W +ES + P N T
Sbjct: 60  NYNNLHYWLIESQLTPSNDT 79


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 109 NYSGLHLWSVESCVLPKNGT 50
           NY+ LH W +ES + P N T
Sbjct: 60  NYNNLHYWLIESQLTPSNDT 79


>Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical
           protein C38C10.3 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = +1

Query: 250 EEERSHHKCREQTDTKQQDELHGVRLS--TLAPXXP-RTSSGIVSQLSSDLSSPKTRLSL 420
           E   S++K ++  +  Q++      L+  T  P    + SSG+VSQ+SS  SS + R +L
Sbjct: 56  ESPTSYNKYQKNVEPVQKENQKPKDLNKMTAGPHIAVKNSSGLVSQISSTTSSERKRRTL 115

Query: 421 CTSATVS 441
              ++ S
Sbjct: 116 ARPSSSS 122


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +2

Query: 86   PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 253
            P +K  +V LC+   +LY + S     + + EQLY  +SV  A    + ++ +  + EE 
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981

Query: 254  KSEVITNVVNKLIRNNKMNCMEYAY 328
            + E   N++N  +      C+E AY
Sbjct: 982  EPETYHNILN--VMPEGQACLEKAY 1004


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +2

Query: 86   PKMKPAIVILCLFVASLYAADSD-VPNDILEEQLY--NSVVVADYDSAVEKSKH-LYEEK 253
            P +K  +V LC+   +LY + S     + + EQLY  +SV  A    + ++ +  + EE 
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNEEI 981

Query: 254  KSEVITNVVNKLIRNNKMNCMEYAY 328
            + E   N++N  +      C+E AY
Sbjct: 982  EPETYHNILN--VMPEGQACLEKAY 1004


>AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical
           protein T15B7.14 protein.
          Length = 650

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -1

Query: 769 SSTSVKALLYSRL*M*NKTSLSYLAG--CRYHWALKLSTLLTPKAIWSPFQLVPTPNTKY 596
           ++ S+    YS+L +  K++L Y+A   C  +W +   T  T K   S F L+  P   +
Sbjct: 73  TNQSLTTFEYSKLGIFRKSTLFYIAVAVCYLYWLIY--TFCTFKFSRSQFDLLIAPYRGF 130

Query: 595 WLRSVFKI 572
           +L+SV  +
Sbjct: 131 YLKSVLML 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,671,875
Number of Sequences: 27780
Number of extensions: 316239
Number of successful extensions: 1033
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)