Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E04
         (879 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    43   0.012
UniRef50_Q10I10 Cluster: Transposon protein, putative, CACTA, En...    36   1.8  
UniRef50_Q3VZY2 Cluster: Putative uncharacterized protein precur...    34   4.1  
UniRef50_Q4A2Z7 Cluster: Putative membrane protein precursor; n=...    34   5.5  
UniRef50_A7RXK9 Cluster: Predicted protein; n=2; Nematostella ve...    33   7.2  
UniRef50_Q948Y7 Cluster: VMP3 protein; n=1; Volvox carteri f. na...    33   9.6  
UniRef50_Q2GZT3 Cluster: Putative uncharacterized protein; n=1; ...    33   9.6  
UniRef50_A4R5L4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.6  

>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 42.7 bits (96), Expect = 0.012
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 341 SAXMNRPTLGXRXFAYWALFRFL 409
           +A MNRPT G R FAYWALFRFL
Sbjct: 25  AALMNRPTRGERRFAYWALFRFL 47


>UniRef50_Q10I10 Cluster: Transposon protein, putative, CACTA,
           En/Spm sub-class, expressed; n=4; Oryza sativa|Rep:
           Transposon protein, putative, CACTA, En/Spm sub-class,
           expressed - Oryza sativa subsp. japonica (Rice)
          Length = 675

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 490 PPNQGDNXGKNXSPXXPXPRPTNPXKGRPXXPXTIGSPPXNQHP-KNRS 633
           PP Q  +   + SP  P P P++P +  P  P     PP    P KN+S
Sbjct: 24  PPPQSSSASPSPSPPPPPPTPSSPQRPPPPPPPATPPPPPPASPGKNQS 72


>UniRef50_Q3VZY2 Cluster: Putative uncharacterized protein
           precursor; n=1; Frankia sp. EAN1pec|Rep: Putative
           uncharacterized protein precursor - Frankia sp. EAN1pec
          Length = 273

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +1

Query: 490 PPNQGDNXGKNXSPXXPXPRPTNPXKGRPXXPXTIGSPPXNQHP 621
           P  QG   G    P  P P PT      P  P   GS P + HP
Sbjct: 194 PSGQGPGSGAGQQPPTPTPTPTPTPTPTPTPPPPPGSVPAHGHP 237


>UniRef50_Q4A2Z7 Cluster: Putative membrane protein precursor; n=1;
           Emiliania huxleyi virus 86|Rep: Putative membrane
           protein precursor - Emiliania huxleyi virus 86
          Length = 516

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 29/130 (22%), Positives = 37/130 (28%)
 Frame = +1

Query: 490 PPNQGDNXGKNXSPXXPXPRPTNPXKGRPXXPXTIGSPPXNQHPKNRSXXXDXAKTRKAT 669
           PP+         SP  P P P+ P    P  P     PP +  P          +   A+
Sbjct: 101 PPSPPPPSPPPPSPPPPSPPPSPPPSPSPPSPPPPSPPPPSISPSPPPPPPPWWQAPSAS 160

Query: 670 XXXXXXXXXXXXXPLPGASPRFXXXXXXXXXXXXXAPSXPXPRNXXXPFXXTLPXGKXXP 849
                          P ASP               +P+ P P     P   + P     P
Sbjct: 161 --PSPPPPPPPWWQAPSASPSPPPPSISPSPPSSASPTPPPPSASPSPPPPSPPPPSPPP 218

Query: 850 XSXGHPPPPP 879
                PPPPP
Sbjct: 219 PPPPPPPPPP 228


>UniRef50_A7RXK9 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 534

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 28/112 (25%), Positives = 35/112 (31%), Gaps = 2/112 (1%)
 Frame = +1

Query: 550 PTNPXKGRPXXPXTIGSPPXNQHPKNRSXXXDXAKTRKATXXXXXXXXXXXXXPLPGA-- 723
           P  P +G    P + G+PP    P +R         R  T             P P +  
Sbjct: 308 PPPPSRGAAPPPPSRGAPPP---PPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRG 364

Query: 724 SPRFXXXXXXXXXXXXXAPSXPXPRNXXXPFXXTLPXGKXXPXSXGHPPPPP 879
           +P               AP  P P     P     P     P S G+PPPPP
Sbjct: 365 APPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPP 416


>UniRef50_Q948Y7 Cluster: VMP3 protein; n=1; Volvox carteri f.
           nagariensis|Rep: VMP3 protein - Volvox carteri f.
           nagariensis
          Length = 687

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 30/130 (23%), Positives = 32/130 (24%)
 Frame = +1

Query: 490 PPNQGDNXGKNXSPXXPXPRPTNPXKGRPXXPXTIGSPPXNQHPKNRSXXXDXAKTRKAT 669
           PPN          P  P PRP++P   RP  P     PP    P       D A     T
Sbjct: 514 PPNPPPRPPSPRPPPRPPPRPSSP---RPPPPDPSPPPPSPPSPPTSPSPPDPAWANLPT 570

Query: 670 XXXXXXXXXXXXXPLPGASPRFXXXXXXXXXXXXXAPSXPXPRNXXXPFXXTLPXGKXXP 849
                        P     P                P  P P     P     P     P
Sbjct: 571 SPDPPSPNPPSPDPPSPDPPSAPPPSPPPPSPPPPNPPPPSPPPPNPPPPSPPPPSPPPP 630

Query: 850 XSXGHPPPPP 879
                 PPPP
Sbjct: 631 SPPPPNPPPP 640


>UniRef50_Q2GZT3 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 518

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +3

Query: 528 TXXAXXKAHQPXXRPXXXXXXHRLPPPEPASQKSKXXPXXGXNP---KSHLSPIP 683
           T  A  +AH P   P      H  PPP PA+  +   P    NP    SH+SP P
Sbjct: 100 TTSAPVRAH-PASEPPPASYPHSQPPPAPAANYTAGSPTLYHNPFQDLSHVSPRP 153


>UniRef50_A4R5L4 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 737

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 490 PPNQGDNXGKNXSPXXPXP-RPTNPXKGRPXXPXTIGSPPXNQ 615
           PPN+ +  GK  +P  P P RP  P +     P   G PP N+
Sbjct: 56  PPNKLEGFGKPPAPDSPPPNRPLPPVRPPADNPPPPGKPPPNK 98



 Score = 33.1 bits (72), Expect = 9.6
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 490 PPNQGDNXGKNXSPXXPXP-RPTNPXKGRPXXPXTIGSPPXNQ 615
           PPN+ +  GK  +P  P P RP  P +     P   G PP N+
Sbjct: 117 PPNKLEGFGKPPAPASPPPNRPPPPVRPPADNPPPPGKPPPNK 159


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,825,288
Number of Sequences: 1657284
Number of extensions: 6401613
Number of successful extensions: 21734
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20567
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)