Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E04
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   7.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 526 SPXXPXPRPTNPXKGRPXXP 585
           +P  P PRPT   + +P  P
Sbjct: 249 NPPTPKPRPTKVSRRKPRPP 268


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/34 (26%), Positives = 11/34 (32%)
 Frame = +3

Query: 597 LPPPEPASQKSKXXPXXGXNPKSHLSPIPXXXSP 698
           +PPP P        P      K H   +P    P
Sbjct: 213 IPPPPPEEDDDSNIPQNNPKNKQHNFNLPPGAIP 246


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 815 SSXPSPPVSXXQXRXATPPP 874
           SS PSP  +       TPPP
Sbjct: 130 SSIPSPSTTDDLSTNPTPPP 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,215
Number of Sequences: 336
Number of extensions: 1683
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)