Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E04
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97197-1|CAA65831.1|  366|Drosophila melanogaster spliceosomal p...    30   4.8  
BT023489-1|AAY84889.1|  347|Drosophila melanogaster RE50839p pro...    30   4.8  
AE014298-857|AAF46136.1|  347|Drosophila melanogaster CG3780-PA ...    30   4.8  
AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA...    29   6.4  

>X97197-1|CAA65831.1|  366|Drosophila melanogaster spliceosomal
           protein protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 775 APSXPXPRNXXXPFXXTLPXGKXXPXSXGHPPPPP 879
           AP  P P+    PF  T+P     P + G PP PP
Sbjct: 278 APPPPVPQ--PAPFPATIPPPPLPPMTGGQPPLPP 310


>BT023489-1|AAY84889.1|  347|Drosophila melanogaster RE50839p
           protein.
          Length = 347

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 775 APSXPXPRNXXXPFXXTLPXGKXXPXSXGHPPPPP 879
           AP  P P+    PF  T+P     P + G PP PP
Sbjct: 259 APPPPVPQ--PAPFPATIPPPPLPPMTGGQPPLPP 291


>AE014298-857|AAF46136.1|  347|Drosophila melanogaster CG3780-PA
           protein.
          Length = 347

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 775 APSXPXPRNXXXPFXXTLPXGKXXPXSXGHPPPPP 879
           AP  P P+    PF  T+P     P + G PP PP
Sbjct: 259 APPPPVPQ--PAPFPATIPPPPLPPMTGGQPPLPP 291


>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
            protein.
          Length = 1118

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +1

Query: 490  PPNQGDNX-GKNXSPXXPXPRPTNPXKGRPXXPXTIGSPPXNQHPKN 627
            PPNQG +  G    P    P  + P  G P     IG PP +Q P N
Sbjct: 946  PPNQGRHPPGSQVPPNTGLPPGSIPPLGSPNQ---IGHPPGSQKPPN 989


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,097,769
Number of Sequences: 53049
Number of extensions: 354184
Number of successful extensions: 1317
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)