Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E03
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0415 + 3292576-3293727                                           25   2.6  
10_08_0217 - 15962192-15962884                                         30   2.8  
06_01_0760 - 5676973-5677830                                           30   2.8  
08_02_1019 - 23657175-23658047                                         29   3.7  
06_01_0690 + 5033943-5034740                                           29   3.7  
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698...    28   8.5  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    28   8.5  
06_03_1146 - 28004896-28005554,28005664-28005844                       28   8.5  
02_01_0400 - 2922837-2923060,2923280-2923367,2923422-2923473,292...    28   8.5  

>12_01_0415 + 3292576-3293727
          Length = 383

 Score = 24.6 bits (51), Expect(2) = 2.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 650 GXGGGXGGGXXKNI*FIGW 594
           G GGG GGG  + I  + W
Sbjct: 33  GGGGGGGGGGGEEILSVAW 51



 Score = 23.8 bits (49), Expect(2) = 2.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 668 PGTFXXGXGGGXGGG 624
           PG    G GGG GGG
Sbjct: 25  PGEVEGGGGGGGGGG 39


>10_08_0217 - 15962192-15962884
          Length = 230

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = -1

Query: 761 GGGGGXNSVXXXXVQVWDXS*XLXKGXIPRPPGTFXXGXGGGXGGGXXKN 612
           GGGGG           W        G      G +  G GGG GGG  +N
Sbjct: 34  GGGGGGGGGGSGNGSGWGSGSGSGYGQAGGSGGAYASGGGGGGGGGGGQN 83


>06_01_0760 - 5676973-5677830
          Length = 285

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = -1

Query: 761 GGGGGXNSVXXXXVQVWDXS*XLXKGXIPRPPGTFXXGXGGGXGGGXXKN 612
           GGGGG           W        G      G +  G GGG GGG  +N
Sbjct: 34  GGGGGGGGGGSGNGSGWGSGSGSGYGQSSGSGGAYASGGGGGGGGGGGQN 83


>08_02_1019 - 23657175-23658047
          Length = 290

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 686 GXIPRPPGTFXXGXGGGXGGG 624
           G +P+P G    G GGG GGG
Sbjct: 37  GGVPKPGGGVGGGGGGGGGGG 57


>06_01_0690 + 5033943-5034740
          Length = 265

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/50 (34%), Positives = 17/50 (34%)
 Frame = -1

Query: 761 GGGGGXNSVXXXXVQVWDXS*XLXKGXIPRPPGTFXXGXGGGXGGGXXKN 612
           GGGGG           W        G    P G    G GGG GGG   N
Sbjct: 33  GGGGGGGGGGSGNGSGWGSGSGSGYGQASGPGGYASGGGGGGGGGGGGGN 82


>07_03_1727 +
           29068348-29068571,29069473-29069514,29069593-29069839,
           29069936-29070013,29070551-29070736,29070829-29071126,
           29071775-29072244
          Length = 514

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 170 RRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRA 289
           +RG++ +RA+ EA +E    GT+R+R + +  +    HRA
Sbjct: 384 KRGEQMARAR-EAAREITPEGTERARVVGEEEAGPEHHRA 422


>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
            27505576-27507522,27508478-27508946,27509898-27510079,
            27510746-27511208,27511295-27511691,27511810-27511937,
            27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +2

Query: 626  PPPXPXXXPX*KSPGAXGSPL*XGVNLXPTPAXXYXRPSLXPPP 757
            PPP P   P   +P     P   G ++ P     Y +P   PPP
Sbjct: 1159 PPPPPLPPPPPVAPFHPPGPHFSGPSVPPHHGNNYHQPPSVPPP 1202


>06_03_1146 - 28004896-28005554,28005664-28005844
          Length = 279

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = +2

Query: 626 PPPXPXXXPX*KSPGAXGSPL*XGVNLXPTPAXXYXRPSLXPPPXLXXP 772
           PPP P   P   +P    SP     +  P+PA     PSL P P    P
Sbjct: 141 PPPSPPAVPPPVAPVPMPSP----ASSPPSPAPAAATPSLAPSPVATTP 185


>02_01_0400 -
           2922837-2923060,2923280-2923367,2923422-2923473,
           2924133-2924206,2924298-2924395,2924650-2924719
          Length = 201

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -1

Query: 695 LXKGXIPRPPGTFXXGXGGGXGGGXXKNI*FIGWRFIILL 576
           L  G    PP  F  G GGG GGG      FI +  ++LL
Sbjct: 135 LDDGGTGFPPFRFGGGGGGGGGGGSNSAGGFILFVIVLLL 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,203,481
Number of Sequences: 37544
Number of extensions: 406266
Number of successful extensions: 1723
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)