Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E02
(833 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 105 2e-21
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 63 1e-08
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 55 2e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 53 1e-05
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 50 1e-04
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 45 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.044
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.077
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.1
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 6.7
UniRef50_A3VH47 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_P93311 Cluster: Mitochondrial 60S ribosomal protein L2;... 33 8.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 105 bits (251), Expect = 2e-21
Identities = 52/66 (78%), Positives = 55/66 (83%)
Frame = +1
Query: 538 TSITKIDAQVRGGETRQDYKDTXRFPLGSSLVRSPVSDPGRLPDTCPPFSLREAWRFLIA 717
TSITKIDAQVRGGETRQDYKDT RFPL + + + P RLPDTCPPFSLREAWRFLIA
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSC-ALLFRPCRLPDTCPPFSLREAWRFLIA 82
Query: 718 HAVXIS 735
HAV IS
Sbjct: 83 HAVGIS 88
Score = 39.1 bits (87), Expect = 0.13
Identities = 39/122 (31%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Frame = +3
Query: 471 SKRPGTVKRPRCWRFSIGSAPLXEHHKNRRSSQRWRNPTGL*RYXAFPPGKLPRALSCFR 650
SK+ T R RFSIGSAPL K + FP + P FR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFR 60
Query: 651 PWPLTGYLSAFL--PSGSVALSHSSRCXYLTSGVGRXAPTWAVCTNPPVRPDRXALIPXT 824
P L F + ++H+ ++ AP+WAVCTNPP P A P T
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVG---ISVRCRSFAPSWAVCTNPPFSP-TAAPYPVT 116
Query: 825 IV 830
IV
Sbjct: 117 IV 118
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.9 bits (146), Expect = 1e-08
Identities = 37/57 (64%), Positives = 39/57 (68%)
Frame = -2
Query: 535 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSEVIPLAAAERP 365
RGAEPMEKR + L V LL CS L PLILWITVLPPLSE+ PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 657 PLTGYLSAFLPSGSVALSHSSRCXYLTS 740
PLTGYLSAFLPSGSVALSHSSRC YL+S
Sbjct: 9 PLTGYLSAFLPSGSVALSHSSRCRYLSS 36
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 278 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYHL-TQRR*YGYPQNQG 436
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 54.4 bits (125), Expect = 3e-06
Identities = 45/136 (33%), Positives = 56/136 (41%)
Frame = +2
Query: 302 RGEAVCVLGALPLPRSLTRCARSFGCGERYHLTQRR*YGYPQNQGDNAGKNMXXXXXXXX 481
R +C G +PLPRSLTR ARSFGCGERY LT GD N
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT----------DGDG---NFLEDTRKTL 72
Query: 482 XXXXXXXXXXFFHRLRPPXRASQKSTLKSEVAKPDRTIKIPXVSPWEAPSCALLFPTLAA 661
F P + KS + + + K P P APSCALLF
Sbjct: 73 SKEEIRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF---LP 129
Query: 662 YRIPVRLSPFGKRGAF 709
+ +PV +G+ +F
Sbjct: 130 FGLPVSFRCYGRGFSF 145
Score = 48.0 bits (109), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +1
Query: 538 TSITKIDAQVRGGETRQDYKDTXRFPL 618
TSI K DAQ+ GGETRQDYKD RFPL
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 538 TSITKIDAQVRGGETRQDYKDTXRFPLGS 624
TSITK DAQ+ GGETRQDYKDT RFPL +
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAA 88
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -3
Query: 732 DTYSVSYEKAPRFPKGERRTGIR*AARVGNRRAHEGAS 619
DT SVSYEKAPRFPKG++ + + NRRAHEGA+
Sbjct: 44 DTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAA 81
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/68 (42%), Positives = 36/68 (52%)
Frame = +3
Query: 624 LPRALSCFRPWPLTGYLSAFLPSGSVALSHSSRCXYLTSGVGRXAPTWAVCTNPPVRPDR 803
LP ALSC P + F +GSVALSHSS +++ AP+WAV NPP P
Sbjct: 42 LPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSG-ISARCRSFAPSWAVSKNPPFSP-T 99
Query: 804 XALIPXTI 827
A P T+
Sbjct: 100 AAPYPVTV 107
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 81 DPDMIRYIDEFGQTTTRMQ 137
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.044
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 276 SALMNRPTRGERRFAYW 326
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.077
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 348 ERGSGRAPNTQTASPRALADSLMQ 277
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.1
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 159 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 326
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.1
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 239 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 75
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 6.7
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 411 NTVIHRIRGITQERTCE 461
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A3VH47 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2654
Length = 77
Score = 33.1 bits (72), Expect = 8.8
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 766 QVGAXRPTPEVRYXQREL*ESATLPEGRKADRYPVSGQGRKQESARGSFPGGNAW 602
+ G+ RP +R+ + E A + GR ADR G+ R+ + G P G+AW
Sbjct: 23 RAGSDRPPATLRHRHADARERAPVQAGR-ADRKARGGRRRRACGSVGGTPAGDAW 76
>UniRef50_P93311 Cluster: Mitochondrial 60S ribosomal protein L2;
n=5; Magnoliophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 349
Score = 33.1 bits (72), Expect = 8.8
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 606 AFPPGKLP-RALSCFRPWPLTGYLSAFLPSGSVALSHSSRCXYLTSGVG 749
+F PGK+ R ++CF P + Y+ LP+G LS SS+ + + G G
Sbjct: 110 SFLPGKVDKRKVACFSPGLMAAYVVVGLPTGMPPLS-SSKSAFASKGAG 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,279,699
Number of Sequences: 1657284
Number of extensions: 15147747
Number of successful extensions: 42608
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 40593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42578
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72553824147
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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