Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E02
         (833 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0307 - 22190310-22190468,22190516-22190569,22190677-221910...    29   6.0  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     29   6.0  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    29   6.0  
11_03_0218 + 11832000-11832151,11832578-11832695,11833445-11833456     28   8.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.0  
07_01_1201 - 11419851-11419913,11420090-11420311                       28   8.0  
05_07_0161 + 28089538-28089856,28089921-28090021                       28   8.0  

>09_06_0307 -
           22190310-22190468,22190516-22190569,22190677-22191053,
           22191234-22191436,22192798-22192925
          Length = 306

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 688 GRKADRYPVSGQGRKQESARGSFPGGNAWYLYSPVG 581
           G K D   VSG G   E+ RG    G+ W  +S VG
Sbjct: 86  GAKVDDTGVSGAGAASEADRGGAAAGSCW-AFSAVG 120


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 629 RELPRGKRXVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 501
           R L RGK  +S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 22  RVLSRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 637 SPVSDPGRLPDTCPPFSLREAWRFLIA 717
           S +++  RL D C P  L+E WRFL+A
Sbjct: 842 SHITEEERLAD-CDPRVLKEQWRFLVA 867


>11_03_0218 + 11832000-11832151,11832578-11832695,11833445-11833456
          Length = 93

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 687 PSGSVALSHSSRCXYLTSGVGRXAPTWAVCTNPPVRPDRXALI 815
           P G V    ++ C      VGR     +  T P + PDR  LI
Sbjct: 30  PIGQVGTGRAASCSVGVGDVGRPVTDDSSVTGPKIMPDRDRLI 72


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 284 NESAN---ARGEAVCVLGALPLPRSLTRCAR 367
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 567 QRWRN--PTGL*RYXAFPPGKLPRALSCFRPWP 659
           Q+WR+  PTG   + +FP G LP A    +P P
Sbjct: 27  QQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAP 59


>05_07_0161 + 28089538-28089856,28089921-28090021
          Length = 139

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 764 GWSGTTYTGSEIXTA*AMRKRHASRREKGGQVSGKRP 654
           GW G   T S +  A  +R+R    R +GG  +G  P
Sbjct: 78  GWKGEGRTNSVVWRATVVRRRMRQGRGRGGWEAGAHP 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,607,619
Number of Sequences: 37544
Number of extensions: 455543
Number of successful extensions: 1517
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)