Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D24
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro...    29   8.6  
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro...    29   8.6  
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro...    29   8.6  

>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
           protein.
          Length = 1058

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +2

Query: 749 QEGXXP-SXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           ++G  P + APP      PLP       PPP P    P   +  P P
Sbjct: 475 EDGEKPHAVAPPPPPPPPPLPAFVAPPPPPPPPPPPPPLANYGAPPP 521


>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
           protein.
          Length = 1153

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +2

Query: 749 QEGXXP-SXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           ++G  P + APP      PLP       PPP P    P   +  P P
Sbjct: 570 EDGEKPHAVAPPPPPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPP 616


>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
           protein.
          Length = 1286

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +2

Query: 749 QEGXXP-SXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           ++G  P + APP      PLP       PPP P    P   +  P P
Sbjct: 703 EDGEKPHAVAPPPPPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPP 749


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,761,735
Number of Sequences: 53049
Number of extensions: 430824
Number of successful extensions: 1219
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)