Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D24
         (888 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t...    33   0.33 
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex...    31   0.77 
At5g38560.1 68418.m04662 protein kinase family protein contains ...    29   4.1  
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex...    29   4.1  
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex...    29   4.1  
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex...    29   5.4  
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel...    29   5.4  
At3g24330.1 68416.m03055 glycosyl hydrolase family 17 protein si...    28   7.2  

>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to
           SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
           Lycopersicon esculentum, proline-rich cell wall protein
           [Medicago sativa] GI:3818416; contains Pfam profile
           PF00234 Protease inhibitor/seed storage/LTP family
          Length = 428

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           P+  PP   +  P P       PPP+P T  P   +T P P
Sbjct: 101 PTVKPPPPPYVKPPPPPTVKPPPPPTPYTPPPPTPYTPPPP 141



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/41 (31%), Positives = 15/41 (36%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           P   PP      P P    +  PPP+P T  P      P P
Sbjct: 109 PYVKPPPPPTVKPPPPPTPYTPPPPTPYTPPPPTVKPPPPP 149


>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
           extensin family protein contains similarity to disease
           resistance protein GI:3894383 from [Lycopersicon
           esculentum]; contains leucine-rich repeats,
           Pfam:PF00560; contains proline rich extensin domains,
           INTERPRO:IPR002965
          Length = 847

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
 Frame = +2

Query: 764 PSXAPPXXXHXTP-----LPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           P  +PP   H  P      P    F  PPPSP    P  +H+ P P
Sbjct: 583 PPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPP 628


>At5g38560.1 68418.m04662 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 681

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           PS +PP     TP P       P PSP T  P  T + P P
Sbjct: 137 PSPSPPGE---TPSPPGETPSPPKPSPSTPTPTTTTSPPPP 174


>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 699

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           P  +PP   H  P P       PPP+P    P   H+ P P
Sbjct: 578 PVYSPPPPVHSPPPPVHSP---PPPAPVHSPPPPVHSPPPP 615


>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 727

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 776 PPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           PP     +P P    +  PPP P    P   H+ P P
Sbjct: 519 PPPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPP 555



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           P  +PP   H  P P       PPP P    P   H+ P P
Sbjct: 569 PVHSPPPPVHSPPPPVYS----PPPPPVHSPPPPVHSPPPP 605


>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 760

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/41 (31%), Positives = 15/41 (36%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           PS  PP      P P       PPP P    P   ++ P P
Sbjct: 429 PSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPP 469



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPP---SPXTXLPXXTHTTPXP 886
           P  +PP      P P    +  PPP   SP    P   H+ P P
Sbjct: 541 PPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPP 584


>At3g19430.1 68416.m02464 late embryogenesis abundant
           protein-related / LEA protein-related similar to late
           embryogenesis abundant protein [Picea glauca] GI:1350543
          Length = 559

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 764 PSXAPPXXXHXTPLPXXXXFXXPPPSPXTXLPXXTHTTPXP 886
           PS  PP      P P       PPP+P   +P     TP P
Sbjct: 163 PSPTPPVPTDPMPSPPPPV-SPPPPTPTPSVPSPPDVTPTP 202


>At3g24330.1 68416.m03055 glycosyl hydrolase family 17 protein
           similar to elicitor inducible chitinase Nt-SubE76
           GI:11071974 from [Nicotiana tabacum]
          Length = 500

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
 Frame = -2

Query: 401 FR*DLRSFKLEIHNYLQ-----YCFKLXASLVLYHEVYFPKDFA 285
           FR +LR   +EI N+L      +   +   L LY   YFP DFA
Sbjct: 192 FRPELRDATIEIINFLYSHDSPFTVNIYPFLSLYGNAYFPLDFA 235


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,159,159
Number of Sequences: 28952
Number of extensions: 207239
Number of successful extensions: 817
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)