Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D23
         (978 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.37 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    28   0.49 

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 519 PPPXAPAPPPXXAPXSP 569
           PPP  P PPP   P SP
Sbjct: 581 PPPAPPPPPPMGPPPSP 597



 Score = 28.3 bits (60), Expect = 0.37
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +3

Query: 522 PPXAPAPPPXXAPXSPPPS 578
           PP AP PPP   P  PPPS
Sbjct: 581 PPPAPPPPP---PMGPPPS 596



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 443 PXXPPPPXPRXRAXLRXPP 499
           P  PPPP P   A L  PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPP 545


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.49
 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -1

Query: 504 GXGGXRRXARXRGX--GGGGXXGGG 436
           G GG R   R RG   GGGG  GGG
Sbjct: 74  GRGGGRGRGRGRGGRDGGGGFGGGG 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,015
Number of Sequences: 2352
Number of extensions: 3325
Number of successful extensions: 82
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106885740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)