Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D21
         (853 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P55796 Cluster: Lebocin-3 precursor; n=4; Obtectomera|R...   220   3e-56
UniRef50_Q5KSY2 Cluster: Lebocin-like protein; n=2; Saturniinae|...    70   9e-11
UniRef50_Q0Q030 Cluster: Lebocin-like protein; n=1; Antheraea my...    56   1e-06
UniRef50_Q1GVU6 Cluster: Poly(R)-hydroxyalkanoic acid synthase, ...    34   5.2  
UniRef50_O33635 Cluster: Bifunctional autolysin precursor (AtlE)...    34   5.2  
UniRef50_Q0UCX7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_Q23QZ5 Cluster: Protein kinase domain containing protei...    33   9.1  

>UniRef50_P55796 Cluster: Lebocin-3 precursor; n=4; Obtectomera|Rep:
           Lebocin-3 precursor - Bombyx mori (Silk moth)
          Length = 179

 Score =  220 bits (538), Expect = 3e-56
 Identities = 112/179 (62%), Positives = 114/179 (63%)
 Frame = +3

Query: 72  MYKXXXXXXXXXXXXAQASCXXXXXXXXXXXXXXXXXXXXXXXAGQEPLWLYQGDNVPRA 251
           MYK            AQASC                       AGQEPLWLYQGDNVPRA
Sbjct: 1   MYKFLVFSSVLVLFFAQASCQRFIQPTFRPPPTQRPITRTVRQAGQEPLWLYQGDNVPRA 60

Query: 252 PSTAXHPILPSKIXDVQLDPNRRYVRSVTNPXNNEASIEHSHHTVDIGLDQPIESHRNTR 431
           PSTA HPILPSKI DVQLDPNRRYVRSVTNP NNEASIEHSHHTVDIGLDQPIESHRNTR
Sbjct: 61  PSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDIGLDQPIESHRNTR 120

Query: 432 DLRFLYPRGKLXVPTLPPFNPSQYILIWETVTDDMRXRIKNNCXXIMSTFLIPRDIFQE 608
           DLRFLYPRGKL VPTLPPFNP    +             +         FLIPRDIFQE
Sbjct: 121 DLRFLYPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRQYNEHFLIPRDIFQE 179


>UniRef50_Q5KSY2 Cluster: Lebocin-like protein; n=2;
           Saturniinae|Rep: Lebocin-like protein - Samia cynthia
           ricini (Indian eri silkmoth)
          Length = 162

 Score = 69.7 bits (163), Expect = 9e-11
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +3

Query: 201 AGQEPLWLYQGDNVPRAPSTAXHPILPSKIXDVQLDPNRRYVRSVTNP 344
           A  EPLWL++ +N PRAPST  HP+LPS I D++L+PN RY RS++ P
Sbjct: 50  ADDEPLWLFKDNNEPRAPSTGDHPVLPSIIDDIKLNPNTRYARSLSTP 97


>UniRef50_Q0Q030 Cluster: Lebocin-like protein; n=1; Antheraea
           mylitta|Rep: Lebocin-like protein - Antheraea mylitta
           (Tasar silkworm)
          Length = 140

 Score = 56.0 bits (129), Expect = 1e-06
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +3

Query: 201 AGQEPLWLYQGDNVPRAPSTAXHPILPSKIXDVQLDPNRRYVRSV 335
           A  EPLWLY+G++    P+T  H  LPS I DV+LDPNRR  R V
Sbjct: 45  ATDEPLWLYKGEDNSHEPATGDHSSLPSMIDDVKLDPNRRNTRRV 89


>UniRef50_Q1GVU6 Cluster: Poly(R)-hydroxyalkanoic acid synthase,
           class I; n=8; Bacteria|Rep: Poly(R)-hydroxyalkanoic acid
           synthase, class I - Sphingopyxis alaskensis
           (Sphingomonas alaskensis)
          Length = 590

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 353 VIXWIGDTANIPSVWIELHVVDFRRKNRMV 264
           ++ W GDT N+P+ W   ++ +  R NRMV
Sbjct: 422 LLYWNGDTTNLPAKWHRQYLTELYRDNRMV 451


>UniRef50_O33635 Cluster: Bifunctional autolysin precursor (AtlE)
           [Includes: N-acetylmuramoyl-L- alanine amidase (EC
           3.5.1.28); Mannosyl-glycoprotein endo-beta-N-
           acetylglucosaminidase (EC 3.2.1.96)]; n=18;
           Staphylococcus|Rep: Bifunctional autolysin precursor
           (AtlE) [Includes: N-acetylmuramoyl-L- alanine amidase
           (EC 3.5.1.28); Mannosyl-glycoprotein endo-beta-N-
           acetylglucosaminidase (EC 3.2.1.96)] - Staphylococcus
           epidermidis
          Length = 1335

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 146 ADLQATANTAPDNTYSATSWPGTAMAVSR*QCSSCAKYRXPSDSSFENXRRAARSK-PKV 322
           A  QAT +T     +SAT+ P T  +VS  + SS  KY    +SS  N  R    K P++
Sbjct: 277 ASNQATIDTKQFTPFSATAQPRTVYSVSSQKTSSLPKYTPKVNSSINNYIRKKNMKAPRI 336


>UniRef50_Q0UCX7 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 734

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 313 FGSSCTSXIFEGRIGWXAVLGARGTLSP*YSHSGSWPACRTVRVIGRCV 167
           FG +  S  +E  + W A++    T +    HSGSW A  ++ + GR V
Sbjct: 109 FGVNWISPQYEDTVDWSAIIDGISTTAHMNEHSGSWAAEGSIAIQGRNV 157


>UniRef50_Q23QZ5 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 528

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
 Frame = +3

Query: 276 LPSKIXDVQLDPNRRYVRSVTNPXNNEASIEHSHHTVDIGLDQPIESHRNTRDLRF---L 446
           +PS I  +Q + N        NP  ++AS   S   + I +  P+ S  + ++L+     
Sbjct: 371 IPS-INQIQSEMNLDAYEQRHNPHISKASRSRSIENL-IQMKHPMSSKGSQQNLQLGNHR 428

Query: 447 YPRGKLXVPTLPPFNPSQYILIWETVTDDMRXRIK 551
           Y + K  +PTLPP N ++  LI ++V D++   IK
Sbjct: 429 YQQSKDTIPTLPPINENKRNLI-KSVQDNILTNIK 462


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,454,073
Number of Sequences: 1657284
Number of extensions: 14744909
Number of successful extensions: 38503
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38493
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)