BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP03_F_D21 (853 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073 SB_36576| Best HMM Match : FerB (HMM E-Value=9) 32 0.68 SB_16741| Best HMM Match : FYVE (HMM E-Value=7.1) 32 0.68 SB_16683| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68 SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6 SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074) 29 6.3 SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 28 8.4 SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 28 8.4 SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 28 8.4 >SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 188 Score = 35.1 bits (77), Expect = 0.073 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -1 Query: 259 VLGARGTLSP*YSHSGSWPACRTVRVIGRCVGGGLKVG 146 ++ G +S H GSW +CR + ++ C GGGL++G Sbjct: 109 IMSGCGIMSSPGDHVGSWGSCRVLGIMSGC-GGGLRIG 145 >SB_36576| Best HMM Match : FerB (HMM E-Value=9) Length = 223 Score = 31.9 bits (69), Expect = 0.68 Identities = 22/68 (32%), Positives = 34/68 (50%) Frame = -3 Query: 305 ELHVVDFRRKNRMVCGTWRTRNIVTLIQP*RFLASLSHCTCYRALCWRWPEGRLDEPLAR 126 ELH+ FRR+NRM R+I++ F +CT Y+ +CW++ E R+ L Sbjct: 64 ELHM--FRRENRMAGKQLPARDILS------FENKRRNCTVYKCVCWQYSE-RMHSSLIE 114 Query: 125 SLSKEQHQ 102 +S Q Sbjct: 115 LVSSYLRQ 122 >SB_16741| Best HMM Match : FYVE (HMM E-Value=7.1) Length = 556 Score = 31.9 bits (69), Expect = 0.68 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +3 Query: 435 LRFLYPRGKLXVPTLPPFNPSQY 503 +RF +P L +PTLPP NPSQY Sbjct: 41 MRF-HPPEPLQIPTLPPANPSQY 62 >SB_16683| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 378 Score = 31.9 bits (69), Expect = 0.68 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +3 Query: 435 LRFLYPRGKLXVPTLPPFNPSQY 503 +RF +P L +PTLPP NPSQY Sbjct: 258 MRF-HPPEPLQIPTLPPANPSQY 279 >SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1122 Score = 30.7 bits (66), Expect = 1.6 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQC 334 QCS+C+K S S + R + KP +CS C Sbjct: 762 QCSTCSKSYSTSRSLVRHERSHSSEKPYLCSDC 794 >SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 969 Score = 30.3 bits (65), Expect = 2.1 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 187 VQCDKLARNRYGCIKVTMFLVRQVPXTIRFFLRKSTTCSSIQT-EGMFAVSPIXKI 351 ++CDK+ R+ K TM + R +R + K+ T S++Q F V P I Sbjct: 674 IKCDKIQTGRFVYPKNTMMIPRHFQVGLRIYAGKNETLSTLQNWNPWFKVFPACDI 729 >SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074) Length = 643 Score = 28.7 bits (61), Expect = 6.3 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 315 RRYVRSVTNPXNNEASIEHSHHTVDIGL 398 R ++++TNP NNE IE +D+GL Sbjct: 60 RDEIQNLTNPFNNEWHIEKRQPLIDMGL 87 >SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) Length = 1413 Score = 28.3 bits (60), Expect = 8.4 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Frame = +1 Query: 283 RKSTTCSSIQTEGMFAVSPIXKITRRP--LNIHIIQLILDLTSRSRATVTQGTCGF---- 444 RK++T SS + A P + P L I+ L+L LTS + T++QG+ + Sbjct: 297 RKASTASSHSSSFRLAKKPQHVCSNPPSCLLHSIVALLLCLTSDGQLTLSQGSANWSSAL 356 Query: 445 --CTLEGNXL 468 C LEG L Sbjct: 357 QSCRLEGKQL 366 >SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) Length = 147 Score = 28.3 bits (60), Expect = 8.4 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349 QC+ C KY S S + R + KP C +C + K Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43 Score = 28.3 bits (60), Expect = 8.4 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349 QC+ C KY S S + R + KP C +C + K Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99 >SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) Length = 147 Score = 28.3 bits (60), Expect = 8.4 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349 QC+ C KY S S + R + KP C +C + K Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43 Score = 28.3 bits (60), Expect = 8.4 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349 QC+ C KY S S + R + KP C +C + K Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,632,484 Number of Sequences: 59808 Number of extensions: 472226 Number of successful extensions: 1174 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1081 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1174 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2419355818 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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