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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D21
         (853 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.073
SB_36576| Best HMM Match : FerB (HMM E-Value=9)                        32   0.68 
SB_16741| Best HMM Match : FYVE (HMM E-Value=7.1)                      32   0.68 
SB_16683| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.68 
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074)                  29   6.3  
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)                 28   8.4  
SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)               28   8.4  
SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)                28   8.4  

>SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 188

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -1

Query: 259 VLGARGTLSP*YSHSGSWPACRTVRVIGRCVGGGLKVG 146
           ++   G +S    H GSW +CR + ++  C GGGL++G
Sbjct: 109 IMSGCGIMSSPGDHVGSWGSCRVLGIMSGC-GGGLRIG 145


>SB_36576| Best HMM Match : FerB (HMM E-Value=9)
          Length = 223

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -3

Query: 305 ELHVVDFRRKNRMVCGTWRTRNIVTLIQP*RFLASLSHCTCYRALCWRWPEGRLDEPLAR 126
           ELH+  FRR+NRM       R+I++      F     +CT Y+ +CW++ E R+   L  
Sbjct: 64  ELHM--FRRENRMAGKQLPARDILS------FENKRRNCTVYKCVCWQYSE-RMHSSLIE 114

Query: 125 SLSKEQHQ 102
            +S    Q
Sbjct: 115 LVSSYLRQ 122


>SB_16741| Best HMM Match : FYVE (HMM E-Value=7.1)
          Length = 556

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 435 LRFLYPRGKLXVPTLPPFNPSQY 503
           +RF +P   L +PTLPP NPSQY
Sbjct: 41  MRF-HPPEPLQIPTLPPANPSQY 62


>SB_16683| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 378

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 435 LRFLYPRGKLXVPTLPPFNPSQY 503
           +RF +P   L +PTLPP NPSQY
Sbjct: 258 MRF-HPPEPLQIPTLPPANPSQY 279


>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1122

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQC 334
           QCS+C+K    S S   + R  +  KP +CS C
Sbjct: 762 QCSTCSKSYSTSRSLVRHERSHSSEKPYLCSDC 794


>SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 969

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 187 VQCDKLARNRYGCIKVTMFLVRQVPXTIRFFLRKSTTCSSIQT-EGMFAVSPIXKI 351
           ++CDK+   R+   K TM + R     +R +  K+ T S++Q     F V P   I
Sbjct: 674 IKCDKIQTGRFVYPKNTMMIPRHFQVGLRIYAGKNETLSTLQNWNPWFKVFPACDI 729


>SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074)
          Length = 643

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 315 RRYVRSVTNPXNNEASIEHSHHTVDIGL 398
           R  ++++TNP NNE  IE     +D+GL
Sbjct: 60  RDEIQNLTNPFNNEWHIEKRQPLIDMGL 87


>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
 Frame = +1

Query: 283 RKSTTCSSIQTEGMFAVSPIXKITRRP--LNIHIIQLILDLTSRSRATVTQGTCGF---- 444
           RK++T SS  +    A  P    +  P  L   I+ L+L LTS  + T++QG+  +    
Sbjct: 297 RKASTASSHSSSFRLAKKPQHVCSNPPSCLLHSIVALLLCLTSDGQLTLSQGSANWSSAL 356

Query: 445 --CTLEGNXL 468
             C LEG  L
Sbjct: 357 QSCRLEGKQL 366


>SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
          Length = 147

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349
           QC+ C KY   S S   + R  +  KP  C +C +  K
Sbjct: 6   QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349
           QC+ C KY   S S   + R  +  KP  C +C +  K
Sbjct: 62  QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99


>SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
          Length = 147

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349
           QC+ C KY   S S   + R  +  KP  C +C +  K
Sbjct: 6   QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43



 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK 349
           QC+ C KY   S S   + R  +  KP  C +C +  K
Sbjct: 62  QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,632,484
Number of Sequences: 59808
Number of extensions: 472226
Number of successful extensions: 1174
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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