Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D21
         (853 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060865-1|AAH60865.1|  599|Homo sapiens zinc finger protein 530...    33   1.00 
AC003682-5|AAC24609.1|  557|Homo sapiens R28830_2 protein.             33   1.00 
AB040941-1|BAA96032.1|  573|Homo sapiens KIAA1508 protein protein.     33   1.00 
BC101559-1|AAI01560.1|  389|Homo sapiens ZSCAN23 protein protein.      31   5.3  
BC101557-1|AAI01558.1|  389|Homo sapiens ZSCAN23 protein protein.      31   5.3  

>BC060865-1|AAH60865.1|  599|Homo sapiens zinc finger protein 530
           protein.
          Length = 599

 Score = 33.5 bits (73), Expect = 1.00
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQS 343
           +CS C K    S   F + R   ++KP  CS+C +S
Sbjct: 436 ECSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 471


>AC003682-5|AAC24609.1|  557|Homo sapiens R28830_2 protein.
          Length = 557

 Score = 33.5 bits (73), Expect = 1.00
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQS 343
           +CS C K    S   F + R   ++KP  CS+C +S
Sbjct: 394 ECSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 429


>AB040941-1|BAA96032.1|  573|Homo sapiens KIAA1508 protein protein.
          Length = 573

 Score = 33.5 bits (73), Expect = 1.00
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 236 QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQS 343
           +CS C K    S   F + R   ++KP  CS+C +S
Sbjct: 410 ECSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 445


>BC101559-1|AAI01560.1|  389|Homo sapiens ZSCAN23 protein protein.
          Length = 389

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 230 R*QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK*RGV 361
           R QCS C K    +   F + R     KP  C+QC++S   R V
Sbjct: 304 RYQCSVCGKAFSQNAGLFHHLRIHTGEKPYQCNQCNKSFSRRSV 347


>BC101557-1|AAI01558.1|  389|Homo sapiens ZSCAN23 protein protein.
          Length = 389

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 230 R*QCSSCAKYRXPSDSSFENXRRAARSKPKVCSQCHQSXK*RGV 361
           R QCS C K    +   F + R     KP  C+QC++S   R V
Sbjct: 304 RYQCSVCGKAFSQNAGLFHHLRIHTGEKPYQCNQCNKSFSRRSV 347


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,228,419
Number of Sequences: 237096
Number of extensions: 2247396
Number of successful extensions: 9312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9312
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)