Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D21
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70718-9|CAA94678.2|  371|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AL034365-2|CAA22257.1|  366|Caenorhabditis elegans Hypothetical ...    29   5.5  
U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>Z70718-9|CAA94678.2|  371|Caenorhabditis elegans Hypothetical
           protein C04G2.9 protein.
          Length = 371

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 474 TLPPFNPSQYILIWETVTDDMRXRIKNNCXXIMSTF 581
           TLP  NP QY+ +W    + +  R+ N    + + F
Sbjct: 220 TLPGVNPDQYVALWYMQGEPVMGRVWNEGGKVAANF 255


>AL034365-2|CAA22257.1|  366|Caenorhabditis elegans Hypothetical
           protein Y69E1A.2 protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 474 TLPPFNPSQYILIWETVTDDMRXRIKNNCXXIMSTF 581
           TLP  NP QY+ +W    + +  R+ N    + + F
Sbjct: 215 TLPGVNPDQYVALWYMQGEPVMGRVWNEGGKVAANF 250


>U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical
           protein C07G1.8 protein.
          Length = 131

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/55 (21%), Positives = 27/55 (49%)
 Frame = +1

Query: 364 LNIHIIQLILDLTSRSRATVTQGTCGFCTLEGNXLFQRFLRLTQANIY*YGKPLP 528
           L+ H  +++ ++   +    T+  CG+C    N L++  +  T+ N+    K +P
Sbjct: 13  LSEHSKKIVEEVKEHAVVLYTKDGCGYCVKAKNELYEDGIHYTEKNLNTVSKVIP 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,412,872
Number of Sequences: 27780
Number of extensions: 347370
Number of successful extensions: 838
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)