Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D18
(981 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.007
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 36 0.009
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.015
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.035
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.035
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 34 0.035
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.11
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.11
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.0
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 4.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 5.3
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 5.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 5.3
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 27 5.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 9.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Frame = +2
Query: 776 PPHPPPXXXX---PQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXX-APPAPPXNXXPX 943
PP PPP P + PPPP PP PP APP PP P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 944 PPXPPP 961
PP
Sbjct: 372 TGRQPP 377
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +2
Query: 764 SXAXPPHPP--PXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPA--PPXN 931
S + PP PP P P++ PP P P + PP AP + P N
Sbjct: 226 STSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAIN 285
Query: 932 XXPXPPXPPP 961
PP PPP
Sbjct: 286 STSKPPLPPP 295
Score = 37.1 bits (82), Expect = 0.004
Identities = 38/141 (26%), Positives = 40/141 (28%), Gaps = 7/141 (4%)
Frame = +2
Query: 578 GXXGXPXXXXGAPPPPHP---PXXXKPPPXXXXXXXXXXXXXXXGAXTXXXXXXXXXXXK 748
G P APPPP P P + PP A
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 749 KXXTXSXAXPPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAP-- 922
T + PP P P P PP PPS P P AP AP
Sbjct: 409 ASRTST---PPVPTPPSLPPSAPPSL------PPSAPPSLPMGAPAAPPLPPSAPIAPPL 459
Query: 923 PXNXXPXPPXPP--PXPPXRP 979
P PP PP P PP P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAP 480
Score = 34.7 bits (76), Expect = 0.020
Identities = 24/78 (30%), Positives = 26/78 (33%), Gaps = 11/78 (14%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPS---------XXKKKXXXXPPPXXAPPAPP- 925
PP+ PP P T PP PPS KK+ PPP P
Sbjct: 267 PPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Query: 926 -XNXXPXPPXPPPXPPXR 976
N PPP PP R
Sbjct: 327 IGNGSSNSSLPPPPPPPR 344
Score = 34.3 bits (75), Expect = 0.027
Identities = 24/82 (29%), Positives = 27/82 (32%), Gaps = 11/82 (13%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXX--------PPPXXAPPA 919
S + PP PPP PPPP P + K PPP P +
Sbjct: 286 STSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRS 345
Query: 920 PPXNXXPXPPXP---PPXPPXR 976
P PP PP PP R
Sbjct: 346 NAAGSIPLPPQGRSAPPPPPPR 367
Score = 34.3 bits (75), Expect = 0.027
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXP 955
PP PP P PP PPS P P P APP P P P
Sbjct: 424 PPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAP----IAPPLPAGMPAAPPL--PPAAPAP 476
Query: 956 PPXPPXRP 979
PP P P
Sbjct: 477 PPAPAPAP 484
Score = 29.1 bits (62), Expect = 1.0
Identities = 28/118 (23%), Positives = 33/118 (27%), Gaps = 8/118 (6%)
Frame = +3
Query: 324 PPTXKKPXXFXTXXXPAXXXXXPXXPPHSQXXVXPPCXX------PPXPRXXXLXXXXXP 485
P T ++P + + P P PP PP P L P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 486 -LPXFXPPXRX-GXXRGXXXPP*XXXTTPTTAXXAXAPPXXXXGPPLPHTPPXXXSXP 653
LP PP G PP P A APP P P P + P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 845 PPPXPPSXXKKKXXXXPPPXXAPPAPPXN-XXPXPPXPPPXP 967
PP P S ++ P P PP N PP PP P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 845 PPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPPPXPP 970
PP PS PPP + P N P P P P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = +1
Query: 721 PPXXNPPAXKAXXXLXSXPP----PPPPXXKXPPTXXAXPXPXXS 843
PP PP A + P PPPP + P+ P P S
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
Score = 25.8 bits (54), Expect = 9.3
Identities = 19/71 (26%), Positives = 20/71 (28%), Gaps = 5/71 (7%)
Frame = +2
Query: 779 PHPPPXXXXPQQXRXXXXXTXPPPPXP-----PSXXKKKXXXXPPPXXAPPAPPXNXXPX 943
P PPP P PP P P+ PPP A
Sbjct: 251 PAPPPIPP-PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKK 309
Query: 944 PPXPPPXPPXR 976
P PPP P R
Sbjct: 310 RPPPPPPPSRR 320
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXP 955
PP PPP P PPP P PPP PP PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV---PPPAP-------IMGGPPP---PPPPPGVAGAGPPPP 778
Query: 956 PPXPP 970
PP PP
Sbjct: 779 PPPPP 783
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 842 PPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPPPXP 967
PPPP PP PPP A A P P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 6/37 (16%)
Frame = +2
Query: 878 KXXXXPPPXXAPPAPPXNXXPXPP------XPPPXPP 970
K PPP P P P PP PPP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/68 (30%), Positives = 24/68 (35%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXP 955
PP P P P + PPP PS + P P APP P + P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPS---SEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Query: 956 PPXPPXRP 979
P P
Sbjct: 1098 SVAAPPVP 1105
Score = 36.3 bits (80), Expect = 0.007
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXR-XXXXXTXPPPPXPPSXXKKK--XXXXPPPXXAPPAP-PXN 931
S A PP P P P + PPP P K PPP APP P P
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSA 1224
Query: 932 XXPXPPXPPPXPPXRP 979
P P P P P
Sbjct: 1225 GLPPVPVPTAKAPPVP 1240
Score = 33.5 bits (73), Expect = 0.046
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXRXXXXXTXPPPP---XPPSXXKKKXXXXPPPXXAPPAPPXNX 934
S A PP P P P P P P PPP APP P +
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV 1205
Query: 935 XPXPPXPPP 961
PP PPP
Sbjct: 1206 G-VPPVPPP 1213
Score = 32.3 bits (70), Expect = 0.11
Identities = 27/116 (23%), Positives = 28/116 (24%)
Frame = +2
Query: 620 PPHPPXXXKPPPXXXXXXXXXXXXXXXGAXTXXXXXXXXXXXKKXXTXSXAXPPHPPPXX 799
PP P K PP A K A PP P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 800 XXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPPPXP 967
P P P P K P P + PP P P PP P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP---VPAPSGAPPVP 1124
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAP-PXNXXP 940
S PP P P P T PP P P S P PP P P + P
Sbjct: 1018 SSKAPPVPLPSADAPP---IPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Query: 941 XPPXPPPXPP 970
P P PP
Sbjct: 1075 SIPAPSGAPP 1084
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXA---PPAP-PXN 931
S A PP P P P P P P K P P + PP P P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA 1186
Query: 932 XXPXPPXPPPXPP 970
P P P PP
Sbjct: 1187 GVPPVPPPSEAPP 1199
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 8/73 (10%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPP----PXPPSXXKKKXXXXPPPXXAPPAPPXNXXPX 943
PP P P P P P P P+ P PP PP + P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 944 PPXP----PPXPP 970
P P PP PP
Sbjct: 1200 VPKPSVGVPPVPP 1212
Score = 31.1 bits (67), Expect = 0.25
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPP---PXXAPPAP-PXNXXPX 943
PP P P P + P P K PP P APP P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 944 PPXPPPXPP 970
P P PP
Sbjct: 1152 VPAPSGAPP 1160
Score = 31.1 bits (67), Expect = 0.25
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKK--XXXXPPPXXAPPAPPXNXX 937
S A PP P P P P P P K P P APP P +
Sbjct: 1108 SVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS-V 1166
Query: 938 PXPPXPPP 961
PP P P
Sbjct: 1167 AAPPVPAP 1174
Score = 30.7 bits (66), Expect = 0.33
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXRXXXXXTXPPP--PXPPSXXKKKXXXXP-PPXXAPPAPPXNX 934
S A PP P P P P P PP P P APP P +
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Query: 935 XPXPPXPPPXPPXRP 979
P P P P P
Sbjct: 1158 APPVPKPSVAAPPVP 1172
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 5/70 (7%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXP-----PSXXKKKXXXXPPPXXAPPAPPXNXXP 940
P PP P T P P P K P APP P + P
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 941 XPPXPPPXPP 970
P P PP
Sbjct: 1042 PVPIPTSTPP 1051
Score = 28.3 bits (60), Expect = 1.7
Identities = 26/105 (24%), Positives = 28/105 (26%)
Frame = +2
Query: 341 AXXVXYPXXXRXPXXXPQXPPSLXXXRXPPLXXSPXPTXXXAXRXXXPSXPFXXPXXXXG 520
A V P P P P + P + P P A PS G
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPK---PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Query: 521 GXGXXPPSXXFXNXPXXXGGXXGXPXXXXGAPPPPHPPXXXKPPP 655
PS P G P G PP P PP P P
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP-PPSEAPPVP 1201
Score = 28.3 bits (60), Expect = 1.7
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPP--PXPPSXXKKKXXXXP-PPXXAPPAP-PXNXXPX 943
PP P P P P P PP P P APP P P + P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 944 PPXP----PPXPP 970
P P PP PP
Sbjct: 1181 VPKPAAGVPPVPP 1193
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAP-PXNXXPXPPX 952
PP P P P PP P P P P APP P P P P
Sbjct: 1083 PPVPAPSGIPPV---PKPSVAAPPVPKP----SVAVPPVPAPSGAPPVPKPSVAAPPVPV 1135
Query: 953 PPPXPP 970
P PP
Sbjct: 1136 PSGAPP 1141
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = +2
Query: 845 PPPXPPSXXKKKXXXXPPPXXAPPAP---PXNXXPXPPXP--PPXP 967
PPP P S PP P AP P + P P PP P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVP 1015
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = +2
Query: 857 PPSXXKKKXXXXP--PPXXAPPAPPXNXXPXPPXPPP--XPPXRP 979
P + +K P PP PP P N P PP PP P
Sbjct: 951 PSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP 995
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.9 bits (79), Expect = 0.009
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 11/79 (13%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPP-----------PXXAPPAP 922
P PP P PPPP PP+ + P P P
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYT 228
Query: 923 PXNXXPXPPXPPPXPPXRP 979
P P P PPP PP P
Sbjct: 229 PKQADPLPAPPPPPPPTLP 247
Score = 30.3 bits (65), Expect = 0.43
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +2
Query: 893 PPPXXAPP--APPXNXXPXPPXPPPXPPXRP 979
PPP PP A P P PPP PP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 29.5 bits (63), Expect = 0.76
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 2/69 (2%)
Frame = +2
Query: 770 AXPPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXP- 946
A P PP Q PPP PP P N P P
Sbjct: 218 AVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPA 277
Query: 947 -PXPPPXPP 970
P PP PP
Sbjct: 278 TPSQPPRPP 286
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.015
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = -1
Query: 978 GRXGGXGGGXGGXGXXFXGGAGGAXXGGGXXXXFFFXXEGGXGGG 844
G GG GGG GG GG GG G G F GG GGG
Sbjct: 221 GGHGGFGGGPGGFEGG-PGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 34.7 bits (76), Expect = 0.020
Identities = 30/89 (33%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXGXXFXGGAGGAXXGGGXXXXFFFXXEGGXGGGGXVWXXXXRXCWGX 802
G GG GG GG G G G GG GG GGG + G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP----GG 239
Query: 801 FXXG-GGWGGXAXEXVXCFXGGGVXXGGG 718
F G GG+GG + F GG GGG
Sbjct: 240 FGGGPGGFGG----GLGGFGGGPGGFGGG 264
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXGXXFXGGAGGAXXGGG 892
GG GG GGG GG G GG GG G G
Sbjct: 241 GGGPGGFGGGLGGFGGG-PGGFGGGPGGHG 269
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.035
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 842 PPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPPPXPPXRP 979
P PP P S + P P PP+P + P P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPA-SAPPIPSKAPPIPSSLP 172
Score = 30.7 bits (66), Expect = 0.33
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +2
Query: 779 PHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPP-PXXAPPAPPXNXXPXPP 949
P P P P + + PPP P+ K P P PP PP P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP--KVPPPP 205
Score = 29.9 bits (64), Expect = 0.57
Identities = 18/65 (27%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +2
Query: 788 PPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPP-PX 964
PP P + PP P P P APP P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 965 PPXRP 979
PP P
Sbjct: 184 PPSAP 188
Score = 29.5 bits (63), Expect = 0.76
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 6/42 (14%)
Frame = +2
Query: 872 KKKXXXXPPPXXAPPA------PPXNXXPXPPXPPPXPPXRP 979
K PP APP PP + P P PPP P P
Sbjct: 117 KSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = +2
Query: 764 SXAXPPHPPPXXXXPQQXRXXXXXTXPPP---PXPPSXXKKKXXXXPPPXX--APPAPPX 928
S PP P P P P P PS PPP AP P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 929 NXXPXPPXPPPXPPXRP 979
+ P PP PP P
Sbjct: 186 SAPSLPSAVPPMPPKVP 202
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.035
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 978 GRXGGXGGGXGGXGXXFXGGAGGAXXG-GGXXXXFFFXXEGGXGGGG 841
G GG GG GG G F GG GG G GG GG GG G
Sbjct: 6 GSRGGRGGSRGGRG-GFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 33.5 bits (73), Expect = 0.046
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXGXXFXGGAGGAXXGGGXXXXFFFXXEGGXGG 847
GGR GG GGG GG GGA G G G GG GG
Sbjct: 23 GGR-GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 30.7 bits (66), Expect = 0.33
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXG---XXFXGGAGGAXXGGGXXXXFFFXXEGGXGGG 844
GGR GG GG GG F GG GGA GG GG GG
Sbjct: 9 GGR-GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXGXXFXGGAGGAXXGGGXXXXFFFXXEGGXGGGGXV 835
GG GG GG GG GG GG G GG GG V
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG-SSGGRGGAKGGAKV 73
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 33.9 bits (74), Expect = 0.035
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXGXXFXGGAGGAXXGG 895
GG GG GG GG G GG GG GG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGG 169
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXGXXFXGGAGGAXXGGGXXXXFFFXXEGGXGGG 844
GGR G GG G F GG+ G GGG GG GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGG-FGGGSRGGSRGGFRGGSRGG 189
Score = 29.5 bits (63), Expect = 0.76
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 981 GGRXGGXG-GGXGGXGXXFXGGAGGAXXG--GGXXXXFFFXXEGGXGGG 844
G R G G GG GG F GG GG+ G G F GG GGG
Sbjct: 129 GARNGPAGRGGRGG----FRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 981 GGRXGGXGGGXGGXGXXFXGGAGGAXXG 898
G R G GG GG F GG+ G G
Sbjct: 165 GSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.11
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXP 955
P HP Q + P PP PP P P P APP PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP------PPLP 1736
Query: 956 PPXPPXRP 979
P P
Sbjct: 1737 ASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +1
Query: 718 APPXXNPPAX--KAXXXLXSXPPPPPPXXKXPPTXXAXPXP 834
A P PP A S P PPPP PP A P P
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 718 APPXXNPPAXKAXXXLXSXPPPPPPXXKXPPTXXAXPXPXXS 843
APP + P PP PP PP+ P P S
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/40 (27%), Positives = 14/40 (35%)
Frame = +1
Query: 709 HXXAPPXXNPPAXKAXXXLXSXPPPPPPXXKXPPTXXAXP 828
H + P P + PPPPP PP+ P
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.11
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 893 PPPXXAPPAPPXNXXPXPPXPPPXPP 970
PP PP PP P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 776 PPHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXP 895
PP PPP P Q PPPP PP KK+ P
Sbjct: 11 PPPPPPGFEPPSQ---------PPPPPPPGYVKKRKNKTP 41
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 775 PPPPPPXXKXPPTXXAXPXP 834
PPPPPP PP+ P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 920 PPXNXXPXPPXPPPXPPXRP 979
PP N P PP P PP +P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQP 24
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 608 GAPPPPHPPXXXKPP 652
G PPPP PP +PP
Sbjct: 7 GNPPPPPPPPGFEPP 21
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 842 PPPPXPPSXXKKKXXXXPPPXXAPPAPP 925
PPPP PP + PP PP PP
Sbjct: 9 PPPPPPPPGFE------PPSQPPPPPPP 30
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +2
Query: 779 PHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXK-KKXXXXPPPXXAPPAPPXNXXPXPPXP 955
P P PQ+ P P P+ + P P AP AP P PP
Sbjct: 536 PVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVA 595
Query: 956 PPXP 967
P P
Sbjct: 596 PVVP 599
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = +2
Query: 779 PHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPP 958
P P P + P PP P + P P AP P P PP P
Sbjct: 554 PEAPSVPQRPAVPVVPEALSVPQPPVAP--VAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
Query: 959 PXP 967
P
Sbjct: 612 VAP 614
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +2
Query: 779 PHPPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPP 958
P P PQ+ P P PP+ P A P P P P
Sbjct: 641 PVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVP 700
Query: 959 PXPP 970
P PP
Sbjct: 701 PLPP 704
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Frame = +2
Query: 785 PPPXXXXPQQXRXXXXXTXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPP-- 958
PP P+ P P PS ++ P + P PP P P P
Sbjct: 532 PPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPP--VAPVAPEVPSV 589
Query: 959 PXPPXRP 979
P PP P
Sbjct: 590 PQPPVAP 596
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 893 PPPXXAPPAPPXNXXPXPPXPPPXPP 970
PPP P A P + P PP PP
Sbjct: 1885 PPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = +2
Query: 842 PPPPXPPSXXKKKXXXXPPPXXAPPA-PPXNXXP---XPPXPPPXP 967
PPPP P + K P PPA PP P P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +2
Query: 851 PXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPP--PXPPXRP 979
P PP+ PP AP P N P PP PP P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMP 536
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = -3
Query: 337 FXVGGPXXPQXXXXSPPRRXFXXXFQRXGFXXYXRGGGXGAXSGIXXXPXXGGG 176
F +GGP Q S P F F GGG G G+ GG
Sbjct: 105 FNMGGPGGAQFFSASDPNDIFERVFGHAFAGGGGMGGGMGGMGGMDDDMDMDGG 158
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 775 PPPPPPXXKXPPTXXAXPXP 834
PPPPPP PP + P
Sbjct: 206 PPPPPPQQNYPPAASSSAPP 225
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 842 PPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPP-PXPPXRP 979
PPPP + PP A P P PP P P +P
Sbjct: 207 PPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 960 GGGXGGXGXXFXGGAGGAXXGG 895
GGG GG G GGAG GG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -1
Query: 969 GGXGG-GXGGXGXXFXGGAGGA 907
GG GG G GG G GG GGA
Sbjct: 226 GGLGGAGLGGLGGAGLGGFGGA 247
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 5.3
Identities = 26/126 (20%), Positives = 28/126 (22%), Gaps = 4/126 (3%)
Frame = +2
Query: 614 PPPP--HPPXXXKPPPXXXXXXXXXXXXXXXGAXTXXXXXXXXXXXKKXXTXSXAXPPHP 787
PPPP H P PPP + H
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 788 PPXXXXPQQXRXXXXXTXPPPP--XPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPPP 961
P P PPPP P P P PP + P PPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Query: 962 XPPXRP 979
P
Sbjct: 328 PMHHEP 333
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/68 (25%), Positives = 18/68 (26%), Gaps = 2/68 (2%)
Frame = +2
Query: 782 HPPPXXXXPQQXRXXXXXTXPPPPX--PPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXP 955
H P P PPPP P P P PP + P P
Sbjct: 201 HEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 260
Query: 956 PPXPPXRP 979
PP P
Sbjct: 261 PPPMHHEP 268
Score = 26.2 bits (55), Expect = 7.1
Identities = 18/66 (27%), Positives = 19/66 (28%), Gaps = 4/66 (6%)
Frame = +2
Query: 776 PP--HPPPXXXXPQQXRXXXXXTXPPPPX--PPSXXKKKXXXXPPPXXAPPAPPXNXXPX 943
PP H P P PPPP P P P PP + P
Sbjct: 275 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 334
Query: 944 PPXPPP 961
PPP
Sbjct: 335 EHMPPP 340
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 893 PPPXXAPPAPPXNXXPXPPXPP 958
PP APP PP + P PP
Sbjct: 129 PPSAPAPPLPPSSEGPAVDIPP 150
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +2
Query: 836 TXPPPPXPPSXXKKKXXXXPPPXXAPPAPPXNXXPXPPXPPPXPPXRP 979
T PPPP P P P PPP PP P
Sbjct: 906 TPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,718,958
Number of Sequences: 5004
Number of extensions: 26413
Number of successful extensions: 575
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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