Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D17
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 94 4e-18
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 94 5e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 1e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 58 4e-07
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_Q3SFY7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A4RUG4 Cluster: Predicted protein; n=3; Ostreococcus|Re... 35 2.4
UniRef50_Q4RP97 Cluster: Chromosome 1 SCAF15008, whole genome sh... 35 3.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 34 5.5
UniRef50_A7H8A5 Cluster: Ribonuclease, Rne/Rng family; n=1; Anae... 33 7.3
UniRef50_Q4IWC1 Cluster: Similar to ABC-type phosphonate transpo... 33 9.7
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 102 bits (244), Expect = 1e-20
Identities = 59/108 (54%), Positives = 64/108 (59%)
Frame = +3
Query: 315 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 494
R +C G +PLPRSLTR ARSFGCGERY+LT + R K RP
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTDG------DGNFLEDTRKTLSKEEIRP 79
Query: 495 GTVKRXRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWXLP 638
R RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP P
Sbjct: 80 ------RRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP 121
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 94.3 bits (224), Expect = 4e-18
Identities = 47/71 (66%), Positives = 49/71 (69%)
Frame = +3
Query: 483 SKRPGTVKRXRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWXLPRALSCSDP 662
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP P P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 663 AAYRNTCPPFS 695
+TCPPFS
Sbjct: 62 CRLPDTCPPFS 72
Score = 80.6 bits (190), Expect = 5e-14
Identities = 45/79 (56%), Positives = 49/79 (62%)
Frame = +1
Query: 601 TIKIPGVSPGXSLVRSPVPTLPLTGIPVRLSPLREAWRFLIXHAVXISVRCRSFAPSWAV 780
T + P +P +L+ P LP T P L REAWRFLI HAV ISVRCRSFAPSWAV
Sbjct: 45 TRRFPLEAPSCALLFRPC-RLPDTCPPFSL---REAWRFLIAHAVGISVRCRSFAPSWAV 100
Query: 781 CTXPPFXPNRCALSGTIVL 837
CT PPF P TIVL
Sbjct: 101 CTNPPFSPTAAPYPVTIVL 119
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 93.9 bits (223), Expect = 5e-18
Identities = 48/82 (58%), Positives = 55/82 (67%)
Frame = -2
Query: 837 QDDSTG*XXXXXXXXXXXAHSPAWSERPTPN*DTYSVXYEKAPRFPKGRKADRYSGKRQG 658
QDDS A+SPAWSERP P+ DT SV YEKAPRFPKG+KA++ SGKRQG
Sbjct: 12 QDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQG 71
Query: 657 RNRRAHEGXSRGNAWYLYSPVG 592
RNRRAHEG + + SPVG
Sbjct: 72 RNRRAHEGAAGEKSPASLSPVG 93
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 72.9 bits (171), Expect = 1e-11
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +3
Query: 501 VKRXRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPWXLP 638
V+ R RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 491 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 378
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 291 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 458
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 57.6 bits (133), Expect = 4e-07
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = +3
Query: 576 VRGGETRQDYKDTRRFPWXLPRALSCSDPAAYRNTCPPFSPSGSVALSHXS 728
VR GETRQD K LP ALSCS+PA R PPFS +GSVALSH S
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSS 73
Score = 42.7 bits (96), Expect = 0.012
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = +1
Query: 739 ISVRCRSFAPSWAVCTXPPFXPNRCALSGTIVL 837
IS RCRSFAPSWAV PPF P T+ L
Sbjct: 77 ISARCRSFAPSWAVSKNPPFSPTAAPYPVTVHL 109
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 410 HSKAVIRLSTESGDNAGKNM 469
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 390 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRXRCWRFSIGSAPLTSITK 563
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 564 IDAQVRGGETRQDYKDTRRFPWXLP 638
I Q + +T+ +YK T FP P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 289 SALMNRPTRGERRFAYW 339
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 361 ERGSGRAPNTQTASPRALADSLMQ 290
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3
Query: 690 FSPSGSVALSHXSRCXYLSSV 752
F PSGSVALSH SRC YLSSV
Sbjct: 17 FLPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q3SFY7 Cluster: Putative uncharacterized protein; n=1;
Thiobacillus denitrificans ATCC 25259|Rep: Putative
uncharacterized protein - Thiobacillus denitrificans
(strain ATCC 25259)
Length = 509
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -3
Query: 692 ERRTGIPV--SGRVGTGERTREXPGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTP 519
E R IP+ G R R PG T +F+V SGFA + S+ GG G TP
Sbjct: 241 ELRPNIPLLEDGLKNLDRRRRPTPGLTDTLFVVESGFAPAKKSISIPIPVPLGGPIGLTP 300
Query: 518 ATRPFYGS 495
+ P S
Sbjct: 301 ISFPIIQS 308
>UniRef50_A4RUG4 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 656
Score = 35.1 bits (77), Expect = 2.4
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 586 AKPDRTIKIPGVSPGXSLV-RSPVPTLPLTGIPVRLSPLREAWRFLIXHAVXISVRCRSF 762
A+ R++K PG + V RSP P P T P RE +I H+V ++V+ R +
Sbjct: 273 AELPRSVKKEPKEPGAAAVLRSPTPHSP-TPCETAKPPARETEMHVIRHSVAVTVKVRCY 331
Query: 763 APSWAVCTXPPF 798
+ PPF
Sbjct: 332 GLDADLVIIPPF 343
>UniRef50_Q4RP97 Cluster: Chromosome 1 SCAF15008, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF15008, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 586
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 714 APRFPKGRKADRYSGKRQGRNRRAHEGXSRGNAW 613
AP P GR+ + +RQ RA EG SR NAW
Sbjct: 44 APSPPPGRRPPTRTSRRQAARVRAREGSSRRNAW 77
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 500 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 378
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 172 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 339
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -2
Query: 837 QDDSTG*XXXXXXXXXXXAHSPAWSERPTPN 745
QDDS AHSPAWSERPTPN
Sbjct: 12 QDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_A7H8A5 Cluster: Ribonuclease, Rne/Rng family; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Ribonuclease, Rne/Rng
family - Anaeromyxobacter sp. Fw109-5
Length = 740
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = -2
Query: 762 ERPTPN*DTYSVXYEKAPRFPKG--RKADRYS-GKRQGRNRRAHEGXSRGN 619
+ P D ++ P+ KG R+ DR G+R GR+R A EG RGN
Sbjct: 234 QAPREKADAREARADREPKEGKGGERRRDREERGRRDGRDREAREGRERGN 284
>UniRef50_Q4IWC1 Cluster: Similar to ABC-type phosphonate transport
system ATPase component precursor; n=1; Azotobacter
vinelandii AvOP|Rep: Similar to ABC-type phosphonate
transport system ATPase component precursor -
Azotobacter vinelandii AvOP
Length = 687
Score = 33.1 bits (72), Expect = 9.7
Identities = 30/107 (28%), Positives = 40/107 (37%)
Frame = -3
Query: 698 RGERRTGIPVSGRVGTGERTREXPGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTP 519
RGER + P G G G R PG T G V+ + S F G + + P
Sbjct: 255 RGERPSPQPSPGGRGGGLVQRRSPGVTRGAAAVVRPISQSR---SFQPPLPAGEGWSEGP 311
Query: 518 ATRPFYGSWPFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 378
T + PFAG P +LW + L + AA +P
Sbjct: 312 -THAWPSPLPFAGAAPVRPGRPVPRVLWASTSSMLGRWLSSAAGRKP 357
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,147,957
Number of Sequences: 1657284
Number of extensions: 16029859
Number of successful extensions: 43222
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 41093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43199
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -