Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D17
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to ...    32   0.92 
AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF...    29   6.5  
AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD...    29   6.5  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.5  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.5  

>X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to
           synapsin I protein.
          Length = 980

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 21/72 (29%), Positives = 28/72 (38%)
 Frame = -3

Query: 722 MRKRHASRRGERRTGIPVSGRVGTGERTREXPGETPGIFIVLSGFATSDLSVDFCDARQG 543
           +RK  A   G+        GR  +   +   PG  P      SGF++S L   F  A +G
Sbjct: 526 LRKTFAGIFGDMEIANKKRGRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKG 585

Query: 542 GGAYGKTPATRP 507
            G     P  RP
Sbjct: 586 EGVISTQPTQRP 597


>AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF,
           isoform F protein.
          Length = 981

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 665 GRVGTGERTREXPGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRP 507
           GR  +   +   PG  P      SGF++S L   F  A +G G     P  RP
Sbjct: 546 GRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKGEGVISTQPTQRP 598


>AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD,
           isoform D protein.
          Length = 1041

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 665 GRVGTGERTREXPGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRP 507
           GR  +   +   PG  P      SGF++S L   F  A +G G     P  RP
Sbjct: 606 GRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKGEGVISTQPTQRP 658


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 300 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 395
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 300 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 395
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,301,934
Number of Sequences: 53049
Number of extensions: 750908
Number of successful extensions: 2021
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)