Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D16
(928 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 184 4e-45
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 177 4e-43
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 160 5e-38
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 6e-35
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 148 2e-34
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 146 5e-34
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 136 6e-31
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 4e-27
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 122 1e-26
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 118 3e-25
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 7e-23
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 99 1e-19
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 90 9e-17
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 88 3e-16
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 87 6e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 2e-15
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 85 3e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 84 4e-15
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 84 6e-15
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 82 2e-14
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 81 5e-14
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 79 2e-13
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 79 2e-13
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 77 5e-13
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 3e-12
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 75 3e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 74 6e-12
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 71 3e-11
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 70 7e-11
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 69 2e-10
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 69 2e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 65 2e-09
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 65 3e-09
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 63 1e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 57 7e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 1e-06
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 53 1e-05
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 51 5e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 5e-05
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 8e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 50 1e-04
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 48 3e-04
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 48 5e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 46 0.001
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 46 0.002
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 45 0.002
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 44 0.006
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 44 0.006
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 44 0.006
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 44 0.007
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 43 0.010
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 43 0.013
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 42 0.022
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 42 0.030
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 42 0.030
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.052
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 40 0.068
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 40 0.090
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 40 0.12
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 39 0.16
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 39 0.21
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.48
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.64
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.64
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 36 1.1
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 36 1.1
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 1.5
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 3.4
UniRef50_A6EHK7 Cluster: Pseudouridylate synthase; n=1; Pedobact... 34 5.9
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 34 5.9
UniRef50_Q2Z1N2 Cluster: HrpQ; n=2; Pantoea|Rep: HrpQ - Erwinia ... 33 7.8
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 184 bits (447), Expect = 4e-45
Identities = 89/104 (85%), Positives = 94/104 (90%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 396 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIIL
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIIL 157
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +1
Query: 526 LAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPV 684
LAKLS++PVRRGYWGNKIGKPHTVP + + APRGTGIVSAPV
Sbjct: 157 LAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPV 209
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 177 bits (430), Expect = 4e-43
Identities = 78/105 (74%), Positives = 98/105 (93%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 396 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILG 530
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+G
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMG 131
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +1
Query: 487 ARKSPLPFEALLSLAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTG 666
A++ + + KLS++P+RRGYWG +G PHTVP + + APRG G
Sbjct: 117 AKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAG 176
Query: 667 IVSAPVLRSFSRC*DVTICH 726
+V+APV + F + + C+
Sbjct: 177 LVAAPVTKRFLQLAGIEDCY 196
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 160 bits (388), Expect = 5e-38
Identities = 79/97 (81%), Positives = 83/97 (85%)
Frame = +3
Query: 237 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 416
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 417 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIIL
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIIL 97
Score = 54.4 bits (125), Expect = 4e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 526 LAKLSVLPVRRGYWGNKIGKPHTVP 600
LAKLS++PV RGYWGNKIGKPHTVP
Sbjct: 97 LAKLSIVPVCRGYWGNKIGKPHTVP 121
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 6e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 396 KQTRAGQRTRFKAFVAIGDNNGHIGL 473
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 148 bits (358), Expect = 2e-34
Identities = 69/103 (66%), Positives = 84/103 (81%)
Frame = +3
Query: 219 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 398
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 399 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++IL
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMIL 147
Score = 62.9 bits (146), Expect = 1e-08
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = +1
Query: 526 LAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPVLR 690
LAKL+++PVRRGYWG+K+G+PHT+P + H + + APRG GIV++ ++
Sbjct: 147 LAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVK 201
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 146 bits (355), Expect = 5e-34
Identities = 69/102 (67%), Positives = 83/102 (81%)
Frame = +3
Query: 222 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 401
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 402 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIII 131
Score = 55.6 bits (128), Expect = 2e-06
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +1
Query: 526 LAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPVLR 690
+AKLSV+P+RRGYWG +G+PH++ + + APRG+GIV++P ++
Sbjct: 131 IAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVK 185
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 136 bits (330), Expect = 6e-31
Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 4/130 (3%)
Frame = +3
Query: 225 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 404
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 405 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILG*VVCFT----SSKRLLG* 572
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+ L C T S KR+LG
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQELCNLN--QCQTQFDSSQKRILGK 177
Query: 573 QDRKATHRPL 602
QDR TH P+
Sbjct: 178 QDRLTTHSPM 187
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 4e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 396 KQTRAGQRTRFK 431
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 122 bits (294), Expect = 1e-26
Identities = 57/102 (55%), Positives = 74/102 (72%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 396 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAI 116
Score = 47.6 bits (108), Expect = 5e-04
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +1
Query: 484 AARKSPLPFEALLSLAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGT 663
A++++ ++ AK ++ PVR G W GKPHTV +G + APRGT
Sbjct: 104 ASKEAASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGT 163
Query: 664 GIVSAPV 684
GI+S V
Sbjct: 164 GIISGSV 170
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 118 bits (283), Expect = 3e-25
Identities = 68/109 (62%), Positives = 75/109 (68%)
Frame = +3
Query: 276 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 455
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 456 NGHIGLGVKCSKEVATAIRGAIILG*VVCFTSSKRLLG*QDRKATHRPL 602
NG+ G RG + C ++RLLG QDR+A HRPL
Sbjct: 62 NGYAGRVEVLQGGGRRHPRGHHPDQALHCH-RAQRLLGEQDRQAPHRPL 109
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 7e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 396 KQTRAGQRTRFK 431
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 99.1 bits (236), Expect = 1e-19
Identities = 49/54 (90%), Positives = 49/54 (90%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIIL
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIIL 101
Score = 69.3 bits (162), Expect = 1e-10
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Frame = +1
Query: 511 EALLSLAKLSVLPVRRGYWGNKIGKPHTVPWQ--GH-RQVWFCNSPADSAPRGTGIVSAP 681
EA++ LAKLS++P+R+GYWGNKIGKP+TVP + GH V C P APRGTG+VSAP
Sbjct: 97 EAII-LAKLSIVPLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIP---APRGTGMVSAP 152
Query: 682 V 684
V
Sbjct: 153 V 153
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 89.8 bits (213), Expect = 9e-17
Identities = 46/106 (43%), Positives = 68/106 (64%)
Frame = -3
Query: 533 LAKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGR 354
L +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L HDL + ++Q
Sbjct: 43 LGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRA 102
Query: 353 AEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNPLFLVFL 216
A+EEI+DLE F+ R QV+ L+ D + A++ + G NP VFL
Sbjct: 103 AQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVFL 148
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.2 bits (209), Expect = 3e-16
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = +3
Query: 264 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 443
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 444 IGDNNGHIGLGVKCSKEVATAI 509
I D N ++ LGV+ KE+ A+
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAV 212
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 87.0 bits (206), Expect = 6e-16
Identities = 43/102 (42%), Positives = 67/102 (65%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 396 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAI 110
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +3
Query: 240 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 419
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 420 TRFKAFVAIGDNNGHIGL 473
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 84.6 bits (200), Expect = 3e-15
Identities = 39/98 (39%), Positives = 61/98 (62%)
Frame = +3
Query: 228 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 407
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 408 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+G+R + +G+ NG++G+G +KE A AI+ AI
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAI 99
Score = 35.1 bits (77), Expect = 2.6
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 487 ARKSPLPFEALLSLAKLSVLPVRRGY--WGNKIGKPHTVPWQGHRQVWFCNSPADSAPRG 660
A+++ + + AKL+++ ++RG W GKPHT+P+ + + + AP+G
Sbjct: 88 AKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQG 147
Query: 661 TGIVSAPVLRSFSR 702
G+ V++ R
Sbjct: 148 VGLAVGDVVKVILR 161
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 84.2 bits (199), Expect = 4e-15
Identities = 53/96 (55%), Positives = 63/96 (65%)
Frame = +3
Query: 240 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 419
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 420 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
+KA GD NGH+ G+ EVA I+ IIL
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIIL 136
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 511 EALLSLAKLSVLPVRRGYWGNKIGKPHTVPWQ--GHRQVWFCNSPADSAPRGTGIVSAPV 684
+ ++ L KL ++PV RGY G+K KPHTV + GH V P APR T I SAP+
Sbjct: 131 QRVIILTKLPIVPVWRGYCGSKTSKPHTVLCKVTGHGSVSLHLIP---APRDTVISSAPM 187
Query: 685 LRSFSRC*DVTICH 726
+ + CH
Sbjct: 188 PKKLLMMAGINDCH 201
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 83.8 bits (198), Expect = 6e-15
Identities = 42/98 (42%), Positives = 65/98 (66%)
Frame = +3
Query: 228 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 407
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 408 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAI 107
Score = 39.9 bits (89), Expect = 0.090
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 529 AKLSVLPVRR--GYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPVLRS 693
AK++++PVRR G W G+PH++P++ + AP+GTG+V VL++
Sbjct: 110 AKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKT 166
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 81.8 bits (193), Expect = 2e-14
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = +3
Query: 231 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 398
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 399 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAI 114
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 80.6 bits (190), Expect = 5e-14
Identities = 48/91 (52%), Positives = 61/91 (67%)
Frame = +3
Query: 237 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 416
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 417 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 509
TRF +F I + GH G+GVKCSK+V TA+
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAV 81
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 79.0 bits (186), Expect = 2e-13
Identities = 44/99 (44%), Positives = 59/99 (59%)
Frame = +3
Query: 222 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 401
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 402 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
T GQ TRFKA VA G+ NG++G+G SK++ AI A
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKA 139
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 79.0 bits (186), Expect = 2e-13
Identities = 41/96 (42%), Positives = 58/96 (60%)
Frame = +3
Query: 234 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 413
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 414 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+R +F+ VA+G+ +G++G +V AI+ AI
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAI 152
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 77.4 bits (182), Expect = 5e-13
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = +3
Query: 234 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 413
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 414 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+R +F+ VA+G+ +G IG +V AI+ AI
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAI 101
Score = 34.3 bits (75), Expect = 4.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 520 LSLAKLSVLPVRRGY--WGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPVLR 690
+ +AKL+++ V RG W G+PHTV + + APRG G+ +R
Sbjct: 101 IDIAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVR 159
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 3e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 276 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 455
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 456 NGHIGLGVKCSKEVATAIRGAIIL 527
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 74.9 bits (176), Expect = 3e-12
Identities = 42/99 (42%), Positives = 57/99 (57%)
Frame = +3
Query: 222 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 401
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 402 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
T GQ TRFKA VA G+ NG++G+G +K++ AI A
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKA 120
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.7 bits (173), Expect = 6e-12
Identities = 36/87 (41%), Positives = 55/87 (63%)
Frame = +3
Query: 261 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 440
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 441 AIGDNNGHIGLGVKCSKEVATAIRGAI 521
+G+++G++GL + KEVA+ IR AI
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAI 86
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 71.3 bits (167), Expect = 3e-11
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Frame = -3
Query: 560 PLRTGKTDN--LAKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYR 387
P+ + DN L D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R
Sbjct: 113 PVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDR 172
Query: 386 HDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNP--LFLV 222
D+ N I+Q ++ +NDLEF DW R Q + + D + +++ + G+ NP FLV
Sbjct: 173 LDVHNFILQVW-QQLVNDLEFLDWQRVQEDFFDGRDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 70.1 bits (164), Expect = 7e-11
Identities = 47/96 (48%), Positives = 56/96 (58%)
Frame = +3
Query: 222 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 401
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 402 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 509
T R FK FV+I D + H+ L KCSK+ ATAI
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 68.5 bits (160), Expect = 2e-10
Identities = 46/113 (40%), Positives = 61/113 (53%)
Frame = +3
Query: 225 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 404
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWE----------HPLIKQT 100
Query: 405 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILG*VVCFTSSKRL 563
Q+TRFKA V +G + GH+ LG+K S EVA + I+ V T KRL
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVAIILAKLSIIP-VETATGGKRL 151
Score = 40.7 bits (91), Expect = 0.052
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +1
Query: 511 EALLSLAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPV 684
E + LAKLS++PV G ++ +PH VP + + APRGTG VSAPV
Sbjct: 129 EVAIILAKLSIIPVETATGGKRL-EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPV 185
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 68.5 bits (160), Expect = 2e-10
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Frame = +3
Query: 228 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLK--------- 380
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 381 ----IMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAI 114
Score = 36.3 bits (80), Expect = 1.1
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 511 EALLSLAKLSVLPVRRGY--WGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPV 684
E ++ AKL+++ V RG W G PH++P+Q + AP+G GIV+
Sbjct: 111 EKAINRAKLNIIKVARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDE 170
Query: 685 LRSFSR 702
++ R
Sbjct: 171 IKKIFR 176
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3
Query: 393 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRG 515
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQG 41
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 64.9 bits (151), Expect = 3e-09
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 417 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+IL
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVIL 97
Score = 63.7 bits (148), Expect = 6e-09
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = +1
Query: 526 LAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPV 684
LAKLS+LPV RGYWGN+I KPHTVP + + APRGTG VSAPV
Sbjct: 97 LAKLSILPVPRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPV 149
Score = 33.5 bits (73), Expect = 7.8
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 222 DQKEWVPVTKLGRLVREGKI 281
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 62.9 bits (146), Expect = 1e-08
Identities = 47/104 (45%), Positives = 56/104 (53%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 395
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 396 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 527
QRTR K F + + L V CSKEV TA + AI L
Sbjct: 73 -----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITL 110
Score = 37.9 bits (84), Expect = 0.36
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 559 GYWGNKIGKPHTVPWQ----GHRQVWFCNSPADSAPRGTGIVSAPV 684
GY GNKIG PHT+P V C +APRGTG VSA V
Sbjct: 120 GYKGNKIGNPHTIPCDVTATEKNLVLVC---LTTAPRGTGTVSASV 162
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 216 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 323
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 56.8 bits (131), Expect = 7e-07
Identities = 32/63 (50%), Positives = 41/63 (65%)
Frame = +3
Query: 339 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 519 IIL 527
IIL
Sbjct: 55 IIL 57
Score = 39.9 bits (89), Expect = 0.090
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +1
Query: 559 GYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSAPVLRSFSR 702
G+ GNKI KPHTV + R SAPRGT I+SAPV + R
Sbjct: 68 GWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLR 115
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 1e-06
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 234 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 347
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 351 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKA 123
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 50.8 bits (116), Expect = 5e-05
Identities = 23/78 (29%), Positives = 47/78 (60%)
Frame = +3
Query: 288 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 467
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 468 GLGVKCSKEVATAIRGAI 521
GLGVK S + I+ A+
Sbjct: 144 GLGVKSSMDSKAGIKAAL 161
Score = 44.0 bits (99), Expect = 0.006
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 511 EALLSLAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNSPADSAPRGTGIVSA 678
+A L AKL++ +RRGYW + GKP+T+ ++ + AP+GTGIV++
Sbjct: 158 KAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVAS 213
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -1
Query: 382 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 221
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +3
Query: 360 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAV 65
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +3
Query: 357 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAI 102
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 48.4 bits (110), Expect = 3e-04
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 354 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKAL 68
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 47.6 bits (108), Expect = 5e-04
Identities = 32/93 (34%), Positives = 44/93 (47%)
Frame = +3
Query: 234 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 413
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 414 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 512
QRT+ GH GL CS EVATAI+
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQ 115
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 46.4 bits (105), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 360 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKAL 131
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +3
Query: 339 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 519 II 524
++
Sbjct: 566 LV 567
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 345 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAV 96
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 44.0 bits (99), Expect = 0.006
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAI 62
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 44.0 bits (99), Expect = 0.006
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKA 69
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 44.0 bits (99), Expect = 0.006
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 524
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAI 201
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 43.6 bits (98), Expect = 0.007
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAI 68
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 43.2 bits (97), Expect = 0.010
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3
Query: 351 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 509
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAI 94
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 42.7 bits (96), Expect = 0.013
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 512
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQ 234
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 41.9 bits (94), Expect = 0.022
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ +
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGV 119
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 41.5 bits (93), Expect = 0.030
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 509
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAI 91
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 41.5 bits (93), Expect = 0.030
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 363 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSI 83
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 40.7 bits (91), Expect = 0.052
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +3
Query: 360 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR +
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGV 69
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 40.3 bits (90), Expect = 0.068
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKA 74
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 39.9 bits (89), Expect = 0.090
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILG 530
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + G
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADG 73
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 39.5 bits (88), Expect = 0.12
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 351 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 518
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKA 111
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 39.1 bits (87), Expect = 0.16
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -3
Query: 461 TVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 285
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 284 VDFSFANKTAEFGDRNPLFLVFL 216
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 38.7 bits (86), Expect = 0.21
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 360 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGI 81
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.48
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 360 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 512
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.64
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 521 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 423
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.64
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 360 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 512
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.3 bits (80), Expect = 1.1
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 360 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAM 74
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.3 bits (80), Expect = 1.1
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 366 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 521
++++ I V + G+R F A V +GD G +G G + EV AI+ A+
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAV 142
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 1.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 363 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 512
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 3.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 345 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 509
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A6EHK7 Cluster: Pseudouridylate synthase; n=1; Pedobacter
sp. BAL39|Rep: Pseudouridylate synthase - Pedobacter sp.
BAL39
Length = 283
Score = 33.9 bits (74), Expect = 5.9
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -1
Query: 724 DRWLHLNTLRSFLELAQTQFQYHEGQNQPDCYRTTLAGDLAKGRCVAFR 578
D + LNT R F+EL+ +YH Q QP+ T+ DL K V FR
Sbjct: 27 DNFAGLNTQRYFIELSYNGTEYHGWQIQPNA--VTVQEDLDKALSVFFR 73
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 33.9 bits (74), Expect = 5.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 372 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATA 506
++ + V K + G+R F V IGD G +G G+ EV+ A
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEA 64
>UniRef50_Q2Z1N2 Cluster: HrpQ; n=2; Pantoea|Rep: HrpQ - Erwinia
stewartii
Length = 311
Score = 33.5 bits (73), Expect = 7.8
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 403 HVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLAKLSVLPVRR-GYW--GN 573
H +S+H S L A+ +V V +A+KSPLPF A LS L++L V G W
Sbjct: 108 HDAESSHDSEPTLVEASASVQPVSEHLSAKKSPLPFWAKLSYMGLTLLLVMMLGTWMLNT 167
Query: 574 KIGKPHTVPWQG 609
I P P G
Sbjct: 168 SIASPSAPPAPG 179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,558,345
Number of Sequences: 1657284
Number of extensions: 15358106
Number of successful extensions: 42093
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 39755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41899
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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