Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D14
(1277 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.030
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.65
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 32 1.1
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 1.1
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_5778| Best HMM Match : Gag_MA (HMM E-Value=1.2) 31 1.5
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 4.6
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 25 6.7
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 8.0
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45) 29 8.0
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 8.0
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 37.1 bits (82), Expect = 0.030
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -3
Query: 825 PPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPP 646
PP P + PPPPPPP GGG G P PPP
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPP 992
Query: 645 P 643
P
Sbjct: 993 P 993
Score = 32.7 bits (71), Expect = 0.65
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPP 649
P P P P + PPPPPP GGG G PP
Sbjct: 931 PLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPP 990
Query: 648 PP 643
PP
Sbjct: 991 PP 992
Score = 32.7 bits (71), Expect = 0.65
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPP 649
PPP P + PPPPPP GG G P PP
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPP 992
Query: 648 PP 643
PP
Sbjct: 993 PP 994
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 595 PPPPPXGXXXLXKKKXXGGGXXKXXPXXXPXXXXXXFPPPPPXXXXXXXXXGGG 756
PPPPP G L G + P PPPPP GGG
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQ------PPPPGGNAPPPPPPPGGSAPPPGGG 969
Score = 29.1 bits (62), Expect = 8.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 671 PXGXPXPFXXXSPPPPPPXXXXXXXGGG 754
P P P PPPPPP GGG
Sbjct: 942 PSQPPPPGGNAPPPPPPPGGSAPPPGGG 969
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.7 bits (71), Expect = 0.65
Identities = 25/119 (21%), Positives = 25/119 (21%), Gaps = 1/119 (0%)
Frame = +2
Query: 920 PXXXXPXXPXXPXPXXXXXPXXXPXXXXXXPXXXXXXXXPXXXXXXXPXXPXXXXPXXXP 1099
P P P P P P P P P P P P
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPP 151
Query: 1100 PXXXXXXXXXXXPXXXXXXXXP-PPPXXXXXXXXXXXXXXXXPXPXXPXPXXPPXXXPP 1273
P P P PPP P P P PP PP
Sbjct: 152 PNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPP 210
Score = 29.9 bits (64), Expect = 4.6
Identities = 26/130 (20%), Positives = 26/130 (20%), Gaps = 1/130 (0%)
Frame = +2
Query: 887 PPXXXXXXXXXPXXXXPXXPXXPXPXXXXXPXXXPXXXXXXPXXXXXXXXPXXXXXXXPX 1066
PP P P P P P P P P P
Sbjct: 84 PPTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPS 143
Query: 1067 XPXXXXPXXXPPXXXXXXXXXXXPXXXXXXXXPPP-PXXXXXXXXXXXXXXXXPXPXXPX 1243
P PP P PPP P P P P
Sbjct: 144 PNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPN 203
Query: 1244 PXXPPXXXPP 1273
P P PP
Sbjct: 204 PPPPNPPYPP 213
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -3
Query: 846 KKKKXXPPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
K KK PPP P P + PPPPPPP
Sbjct: 672 KLKKVPPPPPPLPVIEGSSLSVP--PPPPPPPPP 703
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P + PPPPPPP
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/68 (25%), Positives = 17/68 (25%)
Frame = +2
Query: 1070 PXXXXPXXXPPXXXXXXXXXXXPXXXXXXXXPPPPXXXXXXXXXXXXXXXXPXPXXPXPX 1249
P P PP P PPPP P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 1250 XPPXXXPP 1273
PP PP
Sbjct: 425 PPPPPPPP 432
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P + PPPPPPP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P + PPPPPPP
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P + PPPPPPP
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPP 401
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPP 405
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 402 PPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 403 PPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 404 PPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 405 PPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPP 649
PPP P P PPPP P G G G P PP
Sbjct: 687 PPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQ----QQPP 742
Query: 648 PP 643
PP
Sbjct: 743 PP 744
>SB_5778| Best HMM Match : Gag_MA (HMM E-Value=1.2)
Length = 250
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
P P P P + +K+ PPPPPPP
Sbjct: 111 PAPPPTPSLRIAEKQHQSRASPPPPPPP 138
Score = 29.1 bits (62), Expect = 8.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P + +K+ PPPPPPP
Sbjct: 113 PPPTPS-LRIAEKQHQSRASPPPPPPPP 139
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPPP 1184
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPP 646
PPPPPPP GG GG P G PPP
Sbjct: 660 PPPPPPPPP-----GGQAGGAPPPPPPPLPGGAAPPPPPP 694
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 825 PPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PP P P PPPPPPP
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPPPP 380
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 24.6 bits (51), Expect(2) = 6.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 683 PXPFXXXSPPPPPP 724
P P PPPPPP
Sbjct: 188 PSPMAGMPPPPPPP 201
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 707 PPPPPPXXXXXXXGG 751
PPPPPP GG
Sbjct: 195 PPPPPPPPPPGFPGG 209
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 8.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P + + PPPPPPP
Sbjct: 374 PPPPPPPIEGRPPSS---LGNPPPPPPP 398
>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
Length = 1102
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 857 RXKXKKKXXXPPRPXXXKKKKKKKKXXXVXXPPPPPP 747
+ K KKK + KKKKKKKK P P P
Sbjct: 372 KKKKKKKKKKKKKKKKKKKKKKKKKNSVELTMPAPGP 408
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 857 RXKXKKKXXXPPRPXXXKKKKKKKKXXXVXXPPPPPP 747
+ K KKK + KKKKKKKK P P P
Sbjct: 67 KKKKKKKKKKKKKKKKKKKKKKKKKNSVELTMPAPGP 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,409,951
Number of Sequences: 59808
Number of extensions: 319166
Number of successful extensions: 4785
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2492
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 4022976485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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