Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D14
(1277 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.047
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.25
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.25
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.33
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.33
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 27 0.65
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.76
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.76
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.76
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 1.5
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 30 3.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 3.1
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 3.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 3.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 4.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 4.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.3
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 29 5.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 24 6.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 7.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 7.1
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 29 9.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 9.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 9.3
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 9.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 9.3
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 9.3
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 36.3 bits (80), Expect = 0.047
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 704 SPPPPPPXXXXXXXGGGGG-GGXKXXXXXXXXXXXXGXGXGGG 829
+PPPPPP GGGGG GG G G GGG
Sbjct: 53 APPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG 95
Score = 35.9 bits (79), Expect = 0.062
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 704 SPPPPPPXXXXXXXGGGGG-GGXKXXXXXXXXXXXXGXGXGGG 829
+PPPPPP GGGGG GG G G GGG
Sbjct: 110 APPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGG 152
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 762 PPPPPPXXXXXXXGGGGGGEXXXXGXGXPXG 670
PPPPPP GGGGG G G G
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 759 PPPPPXXXXXXXGGGGGGEXXXXGXGXPXG 670
PPPPP GGGGGG G G G
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXG 670
PPPPPP GGGG G G G G
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGGGCG 142
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 774 CXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXG 670
C PPPPP GGG GG G G G
Sbjct: 52 CAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCG 86
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 774 CXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXG 670
C PPPPP GGG GG G G G
Sbjct: 109 CAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143
Score = 29.5 bits (63), Expect = 5.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGGGG--GGEXXXXGXGXPXG 670
PPPPPP GGGG GG G G G
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGG 87
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGG 715
PPP P P + PPPPPPP G G
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 647
Score = 32.3 bits (70), Expect = 0.76
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGG 712
PPP P P + PPPPPPP G G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 647
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGG 715
PPP P P + PPPPPPP G G
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 473
Score = 32.3 bits (70), Expect = 0.76
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGG 712
PPP P P + PPPPPPP G G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAG 473
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.33
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -3
Query: 825 PPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPP 646
PP P + PPPPPPP G G P G PPP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 645 P 643
P
Sbjct: 338 P 338
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPP 649
PPP P P + PPPPPP G GG G P G PP
Sbjct: 297 PPPPPPPPGRTPGPPGMP-GMPPPPPP--SRFGPPGMGGMPPPPPPGMRYPGG--MPPPP 351
Query: 648 PPXF 637
PP +
Sbjct: 352 PPRY 355
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 595 PPPPPXGXXXLXKKKXXGGGXXKXXPXXXPXXXXXXFPPPPP 720
PPPPP G GG P P +PPPPP
Sbjct: 334 PPPPPPGMRY-------PGGMPPPPPPRYPSAGPGMYPPPPP 368
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.33
Identities = 41/197 (20%), Positives = 42/197 (21%)
Frame = -3
Query: 1272 GGXXXGGXXGXGXXGXGXXXXXXXXXXXXXXXXGGGGXXXXXXXXGXXXXXXXXXXXGGX 1093
GG GG G G G G GGG G GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGC 212
Query: 1092 XXGXXXXGXXGXXXXXXXGXXXXXXXXGXXXXXXGXXXGXXXXXGXGXXGXXGXXXXGXX 913
G G G G G G G G G
Sbjct: 213 GGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGY 272
Query: 912 XXXXXXXGGXFWXLXGXXKXKXKKKKXXPPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXX 733
GG G PP P PPPPPPP
Sbjct: 273 AGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP----------------PPPPPPPAPAP 316
Query: 732 XXXGGGGGGEXXXXGXG 682
GGG + G G
Sbjct: 317 VSSGGGYSEQSSGGGGG 333
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 710 PPPPPXXXXXXXGGGGGGGXKXXXXXXXXXXXXGXGXGGG 829
PPP P GGGG GG G G GGG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG 113
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 704 SPPPPPPXXXXXXXGGG-GGGGXKXXXXXXXXXXXXGXGXGGG 829
+PPP P GGG GGGG G G GGG
Sbjct: 73 APPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = +2
Query: 671 PXGXPXPFXXXSPPPPPPXXXXXXXGGG-------GGGGXKXXXXXXXXXXXXGXGXGGG 829
P P P PPPPPP GGG GGGG G GGG
Sbjct: 298 PAAAPPP---PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGGYSGGG 354
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.33
Identities = 41/197 (20%), Positives = 42/197 (21%)
Frame = -3
Query: 1272 GGXXXGGXXGXGXXGXGXXXXXXXXXXXXXXXXGGGGXXXXXXXXGXXXXXXXXXXXGGX 1093
GG GG G G G G GGG G GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGC 212
Query: 1092 XXGXXXXGXXGXXXXXXXGXXXXXXXXGXXXXXXGXXXGXXXXXGXGXXGXXGXXXXGXX 913
G G G G G G G G G
Sbjct: 213 GGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGY 272
Query: 912 XXXXXXXGGXFWXLXGXXKXKXKKKKXXPPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXX 733
GG G PP P PPPPPPP
Sbjct: 273 AGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP----------------PPPPPPPAPAP 316
Query: 732 XXXGGGGGGEXXXXGXG 682
GGG + G G
Sbjct: 317 VSSGGGYSEQSSGGGGG 333
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 710 PPPPPXXXXXXXGGGGGGGXKXXXXXXXXXXXXGXGXGGG 829
PPP P GGGG GG G G GGG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG 113
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 704 SPPPPPPXXXXXXXGGG-GGGGXKXXXXXXXXXXXXGXGXGGG 829
+PPP P GGG GGGG G G GGG
Sbjct: 73 APPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = +2
Query: 671 PXGXPXPFXXXSPPPPPPXXXXXXXGGG-------GGGGXKXXXXXXXXXXXXGXGXGGG 829
P P P PPPPPP GGG GGGG G GGG
Sbjct: 298 PAAAPPP---PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGGYSGGG 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.33
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -3
Query: 825 PPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPP 646
PP P + PPPPPPP G G P G PPP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 645 P 643
P
Sbjct: 348 P 348
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPP 649
PPP P P + PPPPPP G GG G P G PP
Sbjct: 307 PPPPPPPPGRTPGPPGMP-GMPPPPPP--SRFGPPGMGGMPPPPPPGMRYPGG--MPPPP 361
Query: 648 PPXF 637
PP +
Sbjct: 362 PPRY 365
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 595 PPPPPXGXXXLXKKKXXGGGXXKXXPXXXPXXXXXXFPPPPP 720
PPPPP G GG P P +PPPPP
Sbjct: 344 PPPPPPGMRY-------PGGMPPPPPPRYPSAGPGMYPPPPP 378
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 26.6 bits (56), Expect(2) = 0.65
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 774 CXXPPPPPPP 745
C PPPPPPP
Sbjct: 49 CAPPPPPPPP 58
Score = 24.6 bits (51), Expect(2) = 0.65
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGGG 715
PPPPPPP G G
Sbjct: 51 PPPPPPPPPPMCGCGCG 67
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.76
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -3
Query: 792 KKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPPP 643
K++ PPPPPPP G G G P PPPP
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPL--AGSGSPPPPPAAGSPPPPRTGSPPPP 275
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 4/65 (6%)
Frame = -3
Query: 825 PPXPXPXKKKKKKKXXXCXXPPP----PPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFX 658
PP P P K PPP PPPP G G P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 657 XPPPP 643
PPPP
Sbjct: 297 PPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.76
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -3
Query: 792 KKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPPP 643
K++ PPPPPPP G G G P PPPP
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPL--AGSGSPPPPPAAGSPPPPRTGSPPPP 296
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 4/65 (6%)
Frame = -3
Query: 825 PPXPXPXKKKKKKKXXXCXXPPP----PPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFX 658
PP P P K PPP PPPP G G P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 657 XPPPP 643
PPPP
Sbjct: 318 PPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.76
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -3
Query: 792 KKKXXXCXXPPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPPP 643
K++ PPPPPPP G G G P PPPP
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPL--AGSGSPPPPPAAGSPPPPRTGSPPPP 281
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 4/65 (6%)
Frame = -3
Query: 825 PPXPXPXKKKKKKKXXXCXXPPP----PPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFX 658
PP P P K PPP PPPP G G P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 657 XPPPP 643
PPPP
Sbjct: 303 PPPPP 307
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect(2) = 1.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPP 751
PPP P P K PPPPP
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 21.0 bits (42), Expect(2) = 1.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 765 PPPPPP 748
PPPPPP
Sbjct: 1390 PPPPPP 1395
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 683 PXP-FXXXSPPPPPPXXXXXXXGGGGGGG 766
P P F +P PPP GGGGGGG
Sbjct: 712 PQPQFVAVAPVPPPVAPAVAFAGGGGGGG 740
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P PPPPPPP
Sbjct: 112 PPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P ++ PPPPP P
Sbjct: 29 PPPPPKPAPYVEQSAQPQQTAPPPPPAP 56
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 774 CXXPPPPPPPXXXXXXXGGGGGG 706
C PPPPPP GGGGGG
Sbjct: 27 CGCAPPPPPP---ACGCGGGGGG 46
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 723 GGGGGGEXXXXGXGXPXGXXFXXPPPP 643
GGGGGG G G G PPPP
Sbjct: 189 GGGGGGMGGGGGSGGSGGGSGRFPPPP 215
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -3
Query: 762 PPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPPPXFFF 631
PPPPPP G G + G P PPPP F F
Sbjct: 551 PPPPPPLPLDLLKGAVAGLKSVPGGPPPP-----PPPPPPSFMF 589
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Frame = -3
Query: 846 KKKKXXPPPXPXPXKKKKK--KKXXXCXXPP-----PPPPPXXXXXXXGGGGGGEXXXXG 688
K PPP P P K++++ K PP PPPPP G
Sbjct: 506 KSPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
Query: 687 XGXPXGXXFXXPPPP 643
P PPPP
Sbjct: 566 PPLPQNLSGAPPPPP 580
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 843 KKKXXPPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
+K PP P P K++++ P P PPP
Sbjct: 505 QKSPPTPPPPAPGPHKEQRRSTSKDPPRPAPPP 537
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P K + PPPPPPP
Sbjct: 122 PPPPPPPRKSRAGGS-----SPPPPPPP 144
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 746 GGGGGGGXKXXXXXXXXXXXXGXGXGG-GXXFFFFXF 853
GGGGGGG G G GG G FFF F
Sbjct: 458 GGGGGGGSHGFHNFHGFNPFGGGGGGGRGGGDFFFHF 494
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPP 748
PPP P P C PP PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPP 53
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 765 PPPPPPP 745
PPPPPPP
Sbjct: 66 PPPPPPP 72
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPPPXF 637
PPPPPPP GGG G G P G P F
Sbjct: 63 PPPPPPPPAPI----GGGAGYAAPFGGPGPVGGASYSQGPQGF 101
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPPPPXF 637
PPPPPPP GGG G G P G P F
Sbjct: 63 PPPPPPPPAPI----GGGAGYAAPFGGPGPVGGASYSQGPQGF 101
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -3
Query: 822 PXPXPXKKKKKKKXXXCXXPPPP--PPPXXXXXXXGGGGGGEXXXXGXGXPXGXXFXXPP 649
P P P + PPPP PP GGGGG P G P
Sbjct: 478 PAPSPKAQYPTGVFFNQPLPPPPAHPPKIGAHPLVMGGGGGVPMIPMVPMPPGMIGLPPG 537
Query: 648 PP 643
PP
Sbjct: 538 PP 539
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGG------GGGGEXXXXGXGXPXGXXFXXPPPP 643
PPPPPPP GG GG G P PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P C PPPPPPP
Sbjct: 758 PPPPPPPP--------GGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGG------GGGGEXXXXGXGXPXGXXFXXPPPP 643
PPPPPPP GG GG G P PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P C PPPPPPP
Sbjct: 758 PPPPPPPP--------GGCPPPPPPPPP 777
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPP----PPPXXXXXXXGGGGGG 706
P P P + PPPP PPP GGGGG
Sbjct: 1302 PAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDRSGGGGG 1346
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Frame = -3
Query: 765 PPPPPPPXXXXXXXGG------GGGGEXXXXGXGXPXGXXFXXPPPP 643
PPPPPPP GG GG G P PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPPPPP 745
PPP P P C PPPPPPP
Sbjct: 341 PPPPPPPP--------GGCPPPPPPPPP 360
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = -3
Query: 828 PPPXPXPXKKKKKKKXXXCXXPPPP----PPPXXXXXXXGGGGGG 706
P P P + PPPP PPP GGGGG
Sbjct: 1302 PAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDRSGGGGG 1346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,144,256
Number of Sequences: 27780
Number of extensions: 338434
Number of successful extensions: 6071
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3290
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3568584636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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