Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D12
         (883 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13)           30   2.2  
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)         29   6.6  
SB_13977| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.6  
SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.6  
SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.7  
SB_47887| Best HMM Match : PAN (HMM E-Value=4.1e-07)                   28   8.7  

>SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13)
          Length = 661

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +2

Query: 179 IASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 322
           +A++N    G  P+   ++ D+  + P     F++++ G+AVFQ I+S
Sbjct: 128 LANQNKRFMGKSPRIGPKRPDE-KLTPRTTLFFVYLLFGAAVFQTIES 174


>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
          Length = 1027

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 119 NILYNKTKWPPKQRMRIANEIASKNITMR-GNVPKTTKEKEDQ 244
           N L +K KWPP+  +   +E+AS+ +  R   +   T+E E++
Sbjct: 452 NWLSDKAKWPPQPEVTDNDEVASETVKSRKEKLLVATEEPEEK 494


>SB_13977| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 763

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 119 NILYNKTKWPPKQRMRIANEIASKNITMR-GNVPKTTKEKEDQ 244
           N L +K KWPP+  +   +E+AS+ +  R   +   T+E E++
Sbjct: 221 NWLSDKAKWPPQPEVTDNDEVASETVKSRKEKLLVATEEPEEK 263


>SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1358

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 119 NILYNKTKWPPKQRMRIANEIASKNITMR-GNVPKTTKEKEDQ 244
           N L +K KWPP+  +   +E+AS+ +  R   +   T+E E++
Sbjct: 816 NWLSDKAKWPPQPEVTDNDEVASETVKSRKEKLLVATEEPEEK 858


>SB_22055| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 377

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 306 NTAEPHTTKMKRARSQGATGYWSSFSLVVLGTFPLIVMFL 187
           +TAEPHT   +  ++ G  G W  F +  L T PL+V  L
Sbjct: 138 STAEPHT---EMRQTSGCQGLWGQFIISALLT-PLVVHLL 173


>SB_47887| Best HMM Match : PAN (HMM E-Value=4.1e-07)
          Length = 494

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -2

Query: 279 MKRARSQGATGYWSSFSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVLL*SIFVSLI 106
           +K+    G  G  ++ S +    FP     +L IS  I  +C+  H+ LL S+  S+I
Sbjct: 285 LKKGDPNGKLGELANASDITSRLFPFFARSVLVISTVIAAICI-PHYALLTSLSGSII 341


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,316,017
Number of Sequences: 59808
Number of extensions: 426935
Number of successful extensions: 827
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)