Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D12
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   5.3  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   5.3  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   5.3  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.3  
AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.            24   5.3  
AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.            24   5.3  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 240 SSFSLVVLGTFPLIVMFLLAISLAIRILCLGGH 142
           +S ++ +LGT+   +MF++A S+   IL L  H
Sbjct: 270 TSDAVPLLGTYFNCIMFMVASSVVSTILILNYH 302


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -2

Query: 240 SSFSLVVLGTFPLIVMFLLAISLAIRILCLGGH 142
           +S ++ +LGT+   +MF++A S+ + ++ L  H
Sbjct: 287 TSEAVPLLGTYFNCIMFMVASSVVLTVVVLNYH 319


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -2

Query: 237 SFSLVVLGTFPLIVMFLLAISLAIRILCLGGH 142
           S ++ +LGT+   +MF++A S+ + ++ L  H
Sbjct: 288 SDAIPLLGTYFNCIMFMVASSVVLTVVVLNYH 319


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 240 SSFSLVVLGTFPLIVMFLLAISLAIRILCLGGH 142
           +S ++ +LGT+   +MF++A S+   IL L  H
Sbjct: 302 TSDAVPLLGTYFNCIMFMVASSVVSTILILNYH 334


>AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 42  LTFIYVSSEIARCGSSSPFNLLLN*QIYFIT 134
           +TF   + + AR GSSS  N L N Q+ F T
Sbjct: 90  ITFDKANDQTARDGSSSSKNGLSNSQVSFRT 120


>AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 42  LTFIYVSSEIARCGSSSPFNLLLN*QIYFIT 134
           +TF   + + AR GSSS  N L N Q+ F T
Sbjct: 90  ITFDKANDQTARDGSSSSKNGLSNSQVSFRT 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,378
Number of Sequences: 2352
Number of extensions: 16005
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)