Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D12
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    88   9e-18
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    84   1e-16
AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical ...    33   0.36 
Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    32   0.62 
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   4.4  
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 87.8 bits (208), Expect = 9e-18
 Identities = 37/61 (60%), Positives = 49/61 (80%)
 Frame = +2

Query: 149 PKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIR 328
           PKQRM +AN+  SKN+  RGNV K+ K  ED+YP APWL+ LF+FVVCGSAVF+II+ ++
Sbjct: 3   PKQRMTLANKQFSKNVNNRGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRYVK 62

Query: 329 L 331
           +
Sbjct: 63  M 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = +2

Query: 149 PKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIR 328
           PKQRM +AN   SKN+T RGNVPK  K  E ++P + WL+ LFIFVVCGSA+F++I+ I+
Sbjct: 3   PKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIK 62

Query: 329 L 331
           +
Sbjct: 63  V 63


>AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical
           protein Y50D4A.1 protein.
          Length = 821

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +2

Query: 17  LTIG--ESLRFDFYLRVKRNCALWLFESF*FIIKLTNILYNKTKWPPKQRMRIANEIASK 190
           LT G  E LR +F L++K +C LW ++      K+  +   KT++    +  IAN +ASK
Sbjct: 376 LTTGFFEHLRREFPLQIKLHCLLWSYKRLDVWEKIC-VEEGKTRYETVLKSEIANPLASK 434


>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 208 PPHCDVFTGDLV-GDTHSLLRGPFCFVIKYICQFNNKLKGLEEPQRAISLDT*IKV 44
           P + ++  G LV G   +  R      I+Y+C+ NN+ KG+ +  RA   D  +K+
Sbjct: 17  PSNVELHFGGLVCGACAAFFRRTVSLNIRYLCEKNNQCKGMRKNCRACRFDYCVKI 72


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 298 CCVPD--NPINKTSLNHEDNWRTA 363
           CC P+  N +N  S+ H  NWRTA
Sbjct: 136 CCFPEVVNYLNTHSVGHVKNWRTA 159


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 211 CTQNYQGKRRPISCGTLAPCSLHLRSVWLCCVPDNPINKTSLNHEDNW-RTAIENTIK*Q 387
           C+  +   ++P  C T   C L  + + +C VP + I +     ++ W R   E T K +
Sbjct: 113 CSHCHNDAKKPRFCVT---CGLQKKYLMMCRVPKDGIERDDAEEQEEWKRRQEEETRKSK 169

Query: 388 HY 393
            Y
Sbjct: 170 KY 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,031
Number of Sequences: 27780
Number of extensions: 332442
Number of successful extensions: 752
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)