Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D11
         (983 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.49 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   2.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.49
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXP 553
           PP   PPPP      P  G     P   +PP P
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
 Frame = -3

Query: 552 GXGGFXXGGRGXXGPQXGKXXSXXG---GGGXFXGG 454
           G GG   GGRG  G   G+     G   GGG   GG
Sbjct: 63  GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +2

Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGG 343
           GG G G    GGGGR    +   GG        GG+    G  GG
Sbjct: 55  GGYGGGDDGYGGGGR--GGRGGRGGGRGRGRGRGGRDGGGGFGGG 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,362
Number of Sequences: 2352
Number of extensions: 5421
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107707938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)