Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D11
(983 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 38 0.011
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 0.022
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 36 0.033
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.077
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.077
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.077
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 35 0.10
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.18
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.18
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.31
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.72
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.72
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.3
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 1.3
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.9
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.1
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 24 5.9
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 6.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.7
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.9
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 8.9
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 37.9 bits (84), Expect = 0.011
Identities = 33/125 (26%), Positives = 36/125 (28%), Gaps = 2/125 (1%)
Frame = -3
Query: 774 GXXXRGGGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGG--NXXXX 601
G GGG G G GG GG G + GG GG
Sbjct: 136 GYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGG-YGGGGDGGYGGGGFGGGGMG 194
Query: 600 XXXXXXXXXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGGXXXXXPXPRGR 421
G GG+ GG G GP G GGG GG P G
Sbjct: 195 GYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGGGGGGGCPNGE 254
Query: 420 XKKKK 406
+ KK
Sbjct: 255 CRGKK 259
Score = 34.3 bits (75), Expect = 0.14
Identities = 30/107 (28%), Positives = 33/107 (30%)
Frame = -3
Query: 774 GXXXRGGGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGGNXXXXXX 595
G GGGG G G+ GG GG G + GG GG+
Sbjct: 115 GGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGG---YGGGG----GGGGDFGGYGG 167
Query: 594 XXXXXXXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGG 454
G GG GG G G G GGGG GG
Sbjct: 168 GGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGG 214
Score = 30.3 bits (65), Expect = 2.2
Identities = 28/104 (26%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = -3
Query: 762 RGGGGPXXEKNPXXXAXGVXGVXGGX-GGXRXD-GXKIFXSGGTPPRXXGGNXXXXXXXX 589
RG GP G G GG GG G + GG GG
Sbjct: 61 RGQRGPFAAMTGSYGRGGYGGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYG 120
Query: 588 XXXXXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXG 457
G GG+ G G G G GGGG F G
Sbjct: 121 GGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGG 164
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect(2) = 0.022
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 638 VPPXKKIFXPSXRXPPXPPXTP 703
VPP +F PS PP PP P
Sbjct: 1376 VPPPPPLFSPSMILPPPPPPLP 1397
Score = 27.5 bits (58), Expect(2) = 0.022
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKKPP 547
PP PPPP P P P P K P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAP 1369
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 36.3 bits (80), Expect = 0.033
Identities = 46/171 (26%), Positives = 47/171 (27%), Gaps = 8/171 (4%)
Frame = +2
Query: 224 GXPPXGG--GGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXX 397
G PP GG G P + GG P P G G G PP G
Sbjct: 294 GAPPSGGPPGPFDPSGAQPSGGP-PGPFNPSGAPPSGGPPGPFDPSGAPPS-GGPPGPFN 351
Query: 398 XXXFFFFXRPRGXGXXXXXPPXKXPPPPXXXXXXPX-WGPXXPL-----PPXKKPPXPXG 559
P G PP PP P P GP P PP PP P
Sbjct: 352 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 411
Query: 560 XRGGAXXXXXXXXXXXXXFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXTP 712
G PP G PP F PS P P P P
Sbjct: 412 PSGAPPSGGPPGPFNPSGAPP---SGGPPGP--FNPSGAPPSGGPPGPFNP 457
Score = 31.9 bits (69), Expect = 0.72
Identities = 45/171 (26%), Positives = 45/171 (26%), Gaps = 8/171 (4%)
Frame = +2
Query: 224 GXPPXGG--GGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXX 397
G PP GG G P GG P P G G G PP G
Sbjct: 234 GAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSGAPPSGGPPGPFDPSGAPPS-GGPPGPFD 291
Query: 398 XXXFFFFXRPRGXGXXXXXPPXKXPPPPXXXXXXPX-WGPXXPL-----PPXKKPPXPXG 559
P G P PP P P GP P PP PP P
Sbjct: 292 PSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 351
Query: 560 XRGGAXXXXXXXXXXXXXFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXTP 712
G PP G PP F PS P P P P
Sbjct: 352 PSGAPPSGGPPGPFDPSGAPP---SGGPPGP--FDPSGAPPSGGPPGPFDP 397
Score = 31.1 bits (67), Expect = 1.3
Identities = 40/157 (25%), Positives = 42/157 (26%), Gaps = 8/157 (5%)
Frame = +2
Query: 224 GXPPXGG--GGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXX 397
G PP GG G P GG P P G G G PP G
Sbjct: 384 GAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFN 441
Query: 398 XXXFFFFXRPRGXGXXXXXPPXKXPPPPXXXXXXPX-WGPXXPL-----PPXKKPPXPXG 559
P G PP PP P P GP P PP PP P
Sbjct: 442 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 501
Query: 560 XRGGAXXXXXXXXXXXXXFPPXXLGGVPPXKKIFXPS 670
G PP + VP + PS
Sbjct: 502 PSGAPPSGGPPGPFDPSGAPPSGMPPVPLPTDLPIPS 538
Score = 30.7 bits (66), Expect = 1.7
Identities = 29/102 (28%), Positives = 29/102 (28%), Gaps = 6/102 (5%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPPPPXXXXXXPX-WGPXXPL-----PPXKKPPXPXGXRGGAXXXX 586
P G PP PP P P GP P PP PP P G
Sbjct: 181 PPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGG 240
Query: 587 XXXXXXXXXFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXTP 712
PP G PP F PS P P P P
Sbjct: 241 PPGPFDPSGAPP---SGGPPGP--FNPSGAPPSGGPPGPFDP 277
Score = 28.7 bits (61), Expect = 6.7
Identities = 28/102 (27%), Positives = 29/102 (28%), Gaps = 6/102 (5%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPPPPXXXXXXPX-WGPXXPLPPXKKPP-----XPXGXRGGAXXXX 586
P G PP PP P P GP P P + PP P G
Sbjct: 166 PPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGG 225
Query: 587 XXXXXXXXXFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXTP 712
PP G PP F PS P P P P
Sbjct: 226 PPGPFNPSGAPP---SGGPPGP--FDPSGAPPSGGPPGPFNP 262
Score = 28.7 bits (61), Expect = 6.7
Identities = 43/171 (25%), Positives = 44/171 (25%), Gaps = 8/171 (4%)
Frame = +2
Query: 224 GXPPXGG--GGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXX 397
G PP GG G P GG PP + G G P G
Sbjct: 174 GAPPSGGPPGPFGPSGAPPSGG--PPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFN 231
Query: 398 XXXFFFFXRPRGXGXXXXXPPXKXPPPPXXXXXXPX-WGPXXPL-----PPXKKPPXPXG 559
P G PP PP P P GP P PP PP P
Sbjct: 232 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 291
Query: 560 XRGGAXXXXXXXXXXXXXFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXTP 712
G P G PP F PS P P P P
Sbjct: 292 PSGAPPSGGPPGPFDPSGAQP---SGGPPGP--FNPSGAPPSGGPPGPFDP 337
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.077
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Frame = +2
Query: 437 GXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGAXXXXXXXXXXXXXF 616
G PP PPP GP P PP PP G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 617 PPXXLGGVPPXKKIFXP-SXRXPPXPPXTP 703
PP GG PP P + P PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPP---PPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGG 571
P G PP PP PP P P PP PP P G +GG
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.077
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Frame = +2
Query: 437 GXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGAXXXXXXXXXXXXXF 616
G PP PPP GP P PP PP G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 617 PPXXLGGVPPXKKIFXP-SXRXPPXPPXTP 703
PP GG PP P + P PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPP---PPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGG 571
P G PP PP PP P P PP PP P G +GG
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.077
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Frame = +2
Query: 437 GXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGAXXXXXXXXXXXXXF 616
G PP PPP GP P PP PP G
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 617 PPXXLGGVPPXKKIFXP-SXRXPPXPPXTP 703
PP GG PP P + P PP P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPP---PPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGG 571
P G PP PP PP P P PP PP P G +GG
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 34.7 bits (76), Expect = 0.10
Identities = 29/101 (28%), Positives = 29/101 (28%)
Frame = -3
Query: 756 GGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGGNXXXXXXXXXXXX 577
GGGP G G GG G G GG GGN
Sbjct: 26 GGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWG--RGGGRGGGDWGGNNGGGGNWGGNGG 83
Query: 576 XXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGG 454
G GG GGRG G GGGG GG
Sbjct: 84 GRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGG 124
Score = 30.7 bits (66), Expect = 1.7
Identities = 30/102 (29%), Positives = 31/102 (30%)
Frame = -3
Query: 759 GGGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGGNXXXXXXXXXXX 580
GGGG G G G GG R D +GG GGN
Sbjct: 73 GGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGN-NNGGGGNWGGGGNNDGGWGGNNGG 131
Query: 579 XXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGG 454
G GG GRG G G GGGG GG
Sbjct: 132 GGGGR----GGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGG 169
Score = 29.9 bits (64), Expect = 2.9
Identities = 34/120 (28%), Positives = 35/120 (29%), Gaps = 3/120 (2%)
Frame = -3
Query: 774 GXXXRGGGGPXXEKNPXXXAXGVXGVXGG--XGGXRXDGXKIFXSGGTPPRXXGGNXXXX 601
G GGGGP N G G GG GG G +GG GGN
Sbjct: 37 GNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGG-GRGDWGGN--GG 93
Query: 600 XXXXXXXXXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGG-GGXFXGGXXXXXPXPRG 424
G GG GG G G GG GG GG P G
Sbjct: 94 GGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNG 153
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.18
Identities = 28/93 (30%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Frame = +2
Query: 437 GXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXK--KPPXPXGXRGGAXXXXXXXXXXXX 610
G P PPPP P G P PP PP P R G+
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP---RTGSPPPPPTGSP--- 280
Query: 611 XFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXT 709
PP GG PP + P PP P +P T
Sbjct: 281 --PPPPAGGSPPPPRAGSPP--PPPPPRGSPPT 309
Score = 32.7 bits (71), Expect = 0.41
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 5/121 (4%)
Frame = +2
Query: 224 GXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPX-RXGKXXXXXX 400
G PP G G P G PPP G G PP R G
Sbjct: 245 GSPPLAGSGSPPPPPA--AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 401 XXFF----FFXRPRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRG 568
P+ G PPPP P P PP PP RG
Sbjct: 303 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 362
Query: 569 G 571
G
Sbjct: 363 G 363
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.18
Identities = 28/93 (30%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Frame = +2
Query: 437 GXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXK--KPPXPXGXRGGAXXXXXXXXXXXX 610
G P PPPP P G P PP PP P R G+
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP---RTGSPPPPPTGSP--- 301
Query: 611 XFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXT 709
PP GG PP + P PP P +P T
Sbjct: 302 --PPPPAGGSPPPPRAGSPP--PPPPPRGSPPT 330
Score = 32.7 bits (71), Expect = 0.41
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 5/121 (4%)
Frame = +2
Query: 224 GXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPX-RXGKXXXXXX 400
G PP G G P G PPP G G PP R G
Sbjct: 266 GSPPLAGSGSPPPPPA--AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 401 XXFF----FFXRPRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRG 568
P+ G PPPP P P PP PP RG
Sbjct: 324 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 383
Query: 569 G 571
G
Sbjct: 384 G 384
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.18
Identities = 28/93 (30%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Frame = +2
Query: 437 GXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXK--KPPXPXGXRGGAXXXXXXXXXXXX 610
G P PPPP P G P PP PP P R G+
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP---RTGSPPPPPTGSP--- 286
Query: 611 XFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXT 709
PP GG PP + P PP P +P T
Sbjct: 287 --PPPPAGGSPPPPRAGSPP--PPPPPRGSPPT 315
Score = 32.7 bits (71), Expect = 0.41
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 5/121 (4%)
Frame = +2
Query: 224 GXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPX-RXGKXXXXXX 400
G PP G G P G PPP G G PP R G
Sbjct: 251 GSPPLAGSGSPPPPPA--AGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 401 XXFF----FFXRPRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRG 568
P+ G PPPP P P PP PP RG
Sbjct: 309 PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRG 368
Query: 569 G 571
G
Sbjct: 369 G 369
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +2
Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGAXXXXXXXXXXXXXFPPXXLG 634
P PPPP G P+PP PP P G PP LG
Sbjct: 537 PVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPP---------PPPMLG 587
Query: 635 GVPP 646
G PP
Sbjct: 588 GPPP 591
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/86 (26%), Positives = 23/86 (26%), Gaps = 3/86 (3%)
Frame = +2
Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKK---PPXPXGXRGGAXXXXXXXXXXXXXFPPX 625
PP P P P P PP PP P A P
Sbjct: 511 PPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQ 570
Query: 626 XLGGVPPXKKIFXPSXRXPPXPPXTP 703
L G PP P PP PP P
Sbjct: 571 NLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.72
Identities = 39/150 (26%), Positives = 42/150 (28%)
Frame = +2
Query: 281 GXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXXXXXFFFFXRPRGXGXXXXXPP 460
G PPP G + G G PP RP PP
Sbjct: 242 GYQPPPLMGMAQS---GYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP 298
Query: 461 XKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGAXXXXXXXXXXXXXFPPXXLGGV 640
PPPP P P P PP PP G G +P GG+
Sbjct: 299 P--PPPPPGRTPGPPGMPGMPPPP---PPSRFGPPG--MGGMPPPPPPGMRYP----GGM 347
Query: 641 PPXKKIFXPSXRXPPXPPXTPXTPXAXXXG 730
PP PS PP P P A G
Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Score = 29.1 bits (62), Expect = 5.1
Identities = 32/114 (28%), Positives = 34/114 (29%), Gaps = 1/114 (0%)
Frame = +2
Query: 230 PPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXXXXXF 409
PP G P G PPP G+ G PP R G
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPP- 335
Query: 410 FFFXRPRGXGXXXXXPPXKXPPPPXXXXXXPXWGP-XXPLPPXKKPPXPXGXRG 568
P G PP PPPP P GP P PP +PP P G
Sbjct: 336 ---PPPPGMRYPGGMPP---PPPPRY----PSAGPGMYPPPPPSRPPAPPSGHG 379
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.72
Identities = 39/150 (26%), Positives = 42/150 (28%)
Frame = +2
Query: 281 GXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXXXXXFFFFXRPRGXGXXXXXPP 460
G PPP G + G G PP RP PP
Sbjct: 252 GYQPPPLMGMAQS---GYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP 308
Query: 461 XKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGAXXXXXXXXXXXXXFPPXXLGGV 640
PPPP P P P PP PP G G +P GG+
Sbjct: 309 P--PPPPPGRTPGPPGMPGMPPPP---PPSRFGPPG--MGGMPPPPPPGMRYP----GGM 357
Query: 641 PPXKKIFXPSXRXPPXPPXTPXTPXAXXXG 730
PP PS PP P P A G
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Score = 29.1 bits (62), Expect = 5.1
Identities = 32/114 (28%), Positives = 34/114 (29%), Gaps = 1/114 (0%)
Frame = +2
Query: 230 PPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXGKXXXXXXXXF 409
PP G P G PPP G+ G PP R G
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPP- 345
Query: 410 FFFXRPRGXGXXXXXPPXKXPPPPXXXXXXPXWGP-XXPLPPXKKPPXPXGXRG 568
P G PP PPPP P GP P PP +PP P G
Sbjct: 346 ---PPPPGMRYPGGMPP---PPPPRY----PSAGPGMYPPPPPSRPPAPPSGHG 389
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 422 RPRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGG 571
RP G P PP P GP P PP +PP P GG
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPP-PGAPGGG 805
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 422 RPRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGG 571
RP G P PP P GP P PP +PP P GG
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPP-PGAPGGG 805
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +2
Query: 422 RPRGXGXXXXXPPXKXPPPPXXXXXXPXW--GPXXPLPPXKKPPXP 553
R RG PP PPPP P W P LPP PP P
Sbjct: 46 RNRGPPPFGPPPPWDRPPPP---WRRPPWHRRPPWGLPPPPPPPEP 88
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 422 RPRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGG 571
RP G P PP P GP P PP +PP P GG
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPP-PGAPGGG 805
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 422 RPRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGG 571
RP G P PP P GP P PP +PP P GG
Sbjct: 757 RPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPP-PGAPGGG 805
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGG 343
GG G P GGGG GG P GGG G G
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSG 242
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXG 379
GG G P GGGG GG P GGG G GG P G
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAP-SGGGGCGGGGSSGGGGYASAPSGGGG 232
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/107 (26%), Positives = 28/107 (26%)
Frame = -3
Query: 774 GXXXRGGGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGGNXXXXXX 595
G GGGG P G G G GG G GG GG
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG--GCGGGGGGCGGGGGGCGGG 120
Query: 594 XXXXXXXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGG 454
G GG G G G GGGG GG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXG 379
GG G G GGGG GG P GGG G GG P G
Sbjct: 156 GGGGGGGCGGGGGGGCGGGSSGGGGYAVAP-SGGGGCGGGGSSGGGGYAVAPSGGGG 211
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGG 343
GG G P GGGG GG P GGG G G
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSG 242
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXG 379
GG G P GGGG GG P GGG G GG P G
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAP-SGGGGCGGGGSSGGGGYASAPSGGGG 232
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/107 (26%), Positives = 28/107 (26%)
Frame = -3
Query: 774 GXXXRGGGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGGNXXXXXX 595
G GGGG P G G G GG G GG GG
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG--GCGGGGGGCGGGGGGCGGG 120
Query: 594 XXXXXXXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGG 454
G GG G G G GGGG GG
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXG 379
GG G G GGGG GG P GGG G GG P G
Sbjct: 156 GGGGGGGCGGGGGGGCGGGSSGGGGYAVAP-SGGGGCGGGGSSGGGGYAVAPSGGGG 211
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 224 GXPPXGGGGRXPXXKKXXGGXXPPPXKGG-GKXXFHGXXGG 343
G PP GGG P + GG PP GG G HG GG
Sbjct: 153 GPPPLMGGGGDP--RGPPGGMGGPPGHGGMGGPPGHGGQGG 191
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 224 GXPPXGGGGRXPXXKKXXGGXXPPPXKGG-GKXXFHGXXGG 343
G PP GGG P + GG PP GG G HG GG
Sbjct: 433 GPPPLMGGGGDP--RGPPGGMGGPPGHGGMGGPPGHGGQGG 471
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGA 574
P+ G PPPP P G P PP PP P G G A
Sbjct: 617 PQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP--PPPPPSGAGGPA 664
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXG 559
PP PPPP P P PP PP P G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPP---PPPPMG 640
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGA 574
P+ G PPPP P G P PP PP P G G A
Sbjct: 443 PQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP--PPPPPSGAGGPA 490
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXG 559
PP PPPP P P PP PP P G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPP---PPPPMG 466
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 230 PPXGGGGRXPXXKKXXGGXXPPPXKGGG 313
PP G GG P GG PPP GG
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/82 (29%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = +2
Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKK--PPXPXGXRGGAXXXXXXXXXXXXXFPPXX 628
PP + P P P P PP PP P GG PP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPP------------PPPM 100
Query: 629 LGGVPPXKKIFXPSXRXPPXPP 694
+GG+PP +F PP PP
Sbjct: 101 MGGIPPPPPMF--GAPPPPPPP 120
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = +2
Query: 413 FFXRPRGXGXXXXXPPX---KXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXG 559
F P G G PP PPPP P P PP PP G
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.9 bits (64), Expect = 2.9
Identities = 29/102 (28%), Positives = 31/102 (30%)
Frame = -3
Query: 759 GGGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGGNXXXXXXXXXXX 580
GGGG N G G GG GG +G +GG GGN
Sbjct: 63 GGGG--FNGNGGFNGGGRGGGRGGNGGFGDNGGLRGGNGG----GRGGNGGFDDNGGGRG 116
Query: 579 XXXXXXXPXGXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGG 454
G G GGRG G G GGG G
Sbjct: 117 GNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGGNG 158
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 455 PPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXP 553
P K PPPP P P P K PP P
Sbjct: 178 PTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPP 210
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXG 379
GG G G GGGG GG GGG G GG PP G
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACG 119
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = -3
Query: 756 GGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGGTPPRXXGGNXXXXXXXXXXXX 577
GGG P G G GG GG G GG GG
Sbjct: 106 GGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGG 165
Query: 576 XXXXXXPXGXGGFXXGGRGXXGPQXGK 496
G GG GG G G G+
Sbjct: 166 GGGGCGGGGGGGCGGGGGGGCGGGCGR 192
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 5.1
Identities = 29/107 (27%), Positives = 32/107 (29%), Gaps = 4/107 (3%)
Frame = -3
Query: 762 RGGGGPXXEKNPXXXAXGVXGVXGGXG-GXRXDGXKIFXSGGTPPRXXGGNXXXXXXXXX 586
RGGGG G G GG G G G + GG GG
Sbjct: 8 RGGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFR 67
Query: 585 XXXXXXXXXPXGXGGFXXGGRGXXG-PQXGKXX--SXXGGGGXFXGG 454
G G GG G G P+ G+ GG G GG
Sbjct: 68 GGRGGGDRGGFGGRGSPRGGFGGRGSPRGGRGSPRGGRGGAGGMRGG 114
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +2
Query: 203 KKGGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXG 379
+ G G PP G P GG PPP G G +G G PP G
Sbjct: 383 QSGPPGAFAPPPSAFGA-PQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Score = 28.7 bits (61), Expect = 6.7
Identities = 39/173 (22%), Positives = 47/173 (27%), Gaps = 8/173 (4%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGGXXXXXXPPXRXG--- 379
GG PP GG P ++ PPP +G + F G P G
Sbjct: 294 GGPPPSGPPSEYGGYAPPQQQQQQFGAPPP-QGAPQQGFGAPPQGPPQGGPPQGSFGAPP 352
Query: 380 --KXXXXXXXXFFFFXRPRGXGXXXXXPPXKXPPPPXXXXXXPXWG-PXXPLPPXKKPPX 550
+ F P PP + PP +G P P P P
Sbjct: 353 PQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPP 412
Query: 551 PXGXRG--GAXXXXXXXXXXXXXFPPXXLGGVPPXKKIFXPSXRXPPXPPXTP 703
P G G G+ PP G P F P PP P
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = -3
Query: 774 GXXXRGGGGPXXEKNPXXXAXGVXGVXGGXGGXRXDGXKIFXSGG 640
G GGGG N + GG GG G F GG
Sbjct: 238 GGGGGGGGGGQSNNNSSFSSVPAFNGGGGGGGGMNVGAAGFGGGG 282
Score = 23.0 bits (47), Expect(2) = 5.9
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -3
Query: 552 GXGGFXXGG-RGXXGPQXGKXXSXXGGGG 469
G GF GG +G GPQ G G G
Sbjct: 274 GAAGFGGGGGQGYGGPQFGGQGGPQFGNG 302
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 458 PXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXG 559
P P PP P P PP ++PP P G
Sbjct: 240 PSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPG 273
Score = 26.6 bits (56), Expect(2) = 6.1
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 455 PPXKXP--PPPXXXXXXPXWGPXXPLPPXKKPPXPXG 559
PP P P P P P PP ++PP P G
Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPG 262
Score = 20.6 bits (41), Expect(2) = 6.1
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 665 PSXRXPPXPPXTP 703
P R PP PP P
Sbjct: 263 PPTRRPPGPPGPP 275
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 552 GXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGGXXXXXPXPRGR 421
G GG GGRG G G GGGG GG RGR
Sbjct: 95 GGGGGGGGGRGGGG---GGRGGGGGGGGGRGGGGGGRGGGGRGR 135
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 437 GXXXXXPPXKXPPPPXXXXXXPXWGPXXPL-PPXKKPPXP 553
G PP PPPP P P P+ PP PP P
Sbjct: 21 GCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPP 60
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -3
Query: 552 GXGGFXXGGRGXXGPQXGKXXSXXGGGGXFXGGXXXXXPXPRGRXKK 412
G GG GG G G G GGGG G P P GR K
Sbjct: 86 GAGG--GGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGK 130
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/96 (22%), Positives = 26/96 (27%)
Frame = +2
Query: 425 PRGXGXXXXXPPXKXPPPPXXXXXXPXWGPXXPLPPXKKPPXPXGXRGGAXXXXXXXXXX 604
P G P P P P P+ P P P G G
Sbjct: 112 PAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAG 171
Query: 605 XXXFPPXXLGGVPPXKKIFXPSXRXPPXPPXTPXTP 712
P G PP + + PP PP +P P
Sbjct: 172 TNGAPGAPGGDAPPGEA----GPKGPPGPPGSPGAP 203
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 209 GGXGXGXPPXGGGGRXPXXKKXXGGXXPPPXKGGGKXXFHGXXGG 343
GG G G PP P GG PPP + GG
Sbjct: 27 GGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYGAPAGG 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,897,565
Number of Sequences: 27780
Number of extensions: 175901
Number of successful extensions: 1471
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2563248310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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