Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D10
(923 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 38 0.009
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 38 0.009
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 38 0.011
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 35 0.11
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.33
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 33 0.33
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 33 0.43
SB_1944| Best HMM Match : DUF1482 (HMM E-Value=7.3) 32 0.57
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 27 0.61
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.75
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 31 1.00
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_56440| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.7
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 31 1.7
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 31 1.7
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 1.7
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 25 2.2
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 30 3.0
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 30 3.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 4.0
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 29 4.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 29 4.0
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 29 5.3
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 5.3
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 5.3
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 29 7.0
SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042) 29 7.0
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_43492| Best HMM Match : Extensin_2 (HMM E-Value=0.34) 28 9.3
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 28 9.3
SB_9191| Best HMM Match : TolA (HMM E-Value=1) 28 9.3
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 28 9.3
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 28 9.3
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 28 9.3
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 39.9 bits (89), Expect = 0.003
Identities = 42/121 (34%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Frame = -3
Query: 921 RGGPGXPG*XGXGREXGG-GGXXGGFXR---GGXXPGIXXXSXSGXWAXPLXWGGGVFLN 754
RGG G PG GR GG GG GG R GG G SG + +GGG + +
Sbjct: 420 RGGRGGPGGGYEGRGRGGRGGPRGGGPRGYDGGYGQGGGYEGYSGGYRDDYGYGGGSYDH 479
Query: 753 VLCRGGGG---AXWGKTPRHPGPCLRVSGPFGGXFGLXXXFPGGXPRXXGXNRXPXXWXG 583
GGG G PR GP GG G P G PR G + P G
Sbjct: 480 YDSYYGGGYDDYYGGGPPR--------GGPRGGRGGSRGGPPRGAPR--GRSGPPRGRGG 529
Query: 582 G 580
G
Sbjct: 530 G 530
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -3
Query: 921 RGGP--GXP-G*XGXGREXGGGGXXGGFXRGGXXPG 823
RGGP G P G G R GGG G RGG PG
Sbjct: 509 RGGPPRGAPRGRSGPPRGRGGGDFGGRGGRGGTTPG 544
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P +PP NPP P P P P P NP PP
Sbjct: 105 PPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPP 136
Score = 37.1 bits (82), Expect = 0.020
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 834 FPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
+PP NPP P P P P P NP PP
Sbjct: 187 YPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
Score = 35.9 bits (79), Expect = 0.046
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P +PP NPP P P P P P N PP
Sbjct: 176 PPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPP 207
Score = 33.1 bits (72), Expect = 0.33
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 825 PXXFPPXXN--PPXXPXPLVPXPXPXNPXTXGPP 920
P +PP N PP P P P P P NP PP
Sbjct: 158 PPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPP 191
Score = 32.7 bits (71), Expect = 0.43
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPPF 923
P PP N P P P P P P P PP+
Sbjct: 163 PPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPY 195
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 834 FPPXXNPPXXPXPLVPXPXPXNPXTXGP 917
+PP N P P P P P P NP P
Sbjct: 132 YPPPPNAPYPPSPNAPYPPPPNPPYPPP 159
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 834 FPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
+PP N P P P P P P P PP
Sbjct: 140 YPPSPNAPYPPPPNPPYPPPLYPPPPNPP 168
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/88 (23%), Positives = 27/88 (30%)
Frame = +2
Query: 653 NPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRGXAQXPDXEXXKIXXX 832
NP PP P +P PPP + + P P + P+
Sbjct: 153 NPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYP 212
Query: 833 XXXXXXXXXXPPPPXSRPXPX*PGNPGP 916
PPPP + P P P P P
Sbjct: 213 PPPNAPNPPYPPPPNA-PNPPYPPPPNP 239
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVP-XPXPXNPXTXGPPF 923
PP NPP P P P P P P PP+
Sbjct: 204 PPPPNPPYPPPPNAPNPPYPPPPNAPNPPY 233
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 834 FPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
+PP NPP P P P P N PP
Sbjct: 124 YPPPPNPPYPPPPNAPYPPSPNAPYPPPP 152
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 834 FPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
+PP NPP P P P P P PP
Sbjct: 148 YPPPPNPPYPPPLYPPPPNPPPPNAPYPP 176
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P P PP P P P P P NP PP
Sbjct: 168 PPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPP 199
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 834 FPPXXNPPXXPXPLVPXPXPXN-PXTXGPP 920
+PP N P P P P P P N P PP
Sbjct: 195 YPPPPNAPNPPPPNPPYPPPPNAPNPPYPP 224
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 38.3 bits (85), Expect = 0.009
Identities = 28/102 (27%), Positives = 33/102 (32%)
Frame = +2
Query: 614 PXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRGXA 793
P PP + NP PP TR GP F PP P + PPP
Sbjct: 266 PKNAPPPPKRGSSNPPPPP----TR--GPPSNS-FTTQGPPLPPSRDQAPAPPPPLNATP 318
Query: 794 QXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
P ++ PPPP S+P P PP
Sbjct: 319 PPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPP 360
Score = 35.9 bits (79), Expect = 0.046
Identities = 30/99 (30%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Frame = +2
Query: 632 PPGKXXXNPKXPPX-GPETRKQGPGWRGVF-PHXAPPPPRHKTFKKTPPPXFRGXAQXPD 805
PP + P PP GP R P G P APPP ++ PPP RG +
Sbjct: 208 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENR-----PPPPMRGPTSGGE 262
Query: 806 XEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPPL 922
K PPPP P GPPL
Sbjct: 263 PPPPK-NAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPL 300
Score = 34.7 bits (76), Expect = 0.11
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Frame = +2
Query: 632 PPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRG------XA 793
PPG+ P P GP + + P P APPPP+ + PPP RG
Sbjct: 244 PPGEN--RPPPPMRGPTSGGEPPP-----PKNAPPPPKRGS-SNPPPPPTRGPPSNSFTT 295
Query: 794 QXPDXEXXKIXXXXXXXXXXXXXPPPPXSR-----PXPX*PGNPGPP 919
Q P + PPPP SR P P G PP
Sbjct: 296 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPP 342
Score = 34.7 bits (76), Expect = 0.11
Identities = 34/123 (27%), Positives = 38/123 (30%), Gaps = 10/123 (8%)
Frame = +2
Query: 581 PPXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFK 760
PP + P RG P + PP P +R Q P PPPP +
Sbjct: 272 PPKRGSSNPPPPPTRGPPSNSF--TTQGPPL-PPSRDQAPAPPPPLNATPPPPPPSRDQV 328
Query: 761 KTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXX----------PPPPXSRPXPX*PGNP 910
PPP RG P K PPPP RP P NP
Sbjct: 329 PLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRP-PSGKINP 387
Query: 911 GPP 919
PP
Sbjct: 388 PPP 390
Score = 30.7 bits (66), Expect = 1.7
Identities = 30/112 (26%), Positives = 34/112 (30%), Gaps = 9/112 (8%)
Frame = +2
Query: 614 PXXRGXPPGKXXXNPKXPPXGPETRKQGP-GWRGVFPHX-----APPPPRHKTFKKTPPP 775
P RG K PP P + P G + F + PPPP H PPP
Sbjct: 149 PPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPP 208
Query: 776 XFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*P---GNPGPPL 922
R P PP SRP P P P PP+
Sbjct: 209 PERSSGPPPP------PPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPM 254
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 38.3 bits (85), Expect = 0.009
Identities = 28/102 (27%), Positives = 33/102 (32%)
Frame = +2
Query: 614 PXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRGXA 793
P PP + NP PP TR GP F PP P + PPP
Sbjct: 178 PKNAPPPPKRGSSNPPPPP----TR--GPPSNS-FTTQGPPLPPSRDQAPAPPPPLNATP 230
Query: 794 QXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
P ++ PPPP S+P P PP
Sbjct: 231 PPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPP 272
Score = 35.9 bits (79), Expect = 0.046
Identities = 30/99 (30%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Frame = +2
Query: 632 PPGKXXXNPKXPPX-GPETRKQGPGWRGVF-PHXAPPPPRHKTFKKTPPPXFRGXAQXPD 805
PP + P PP GP R P G P APPP ++ PPP RG +
Sbjct: 120 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENR-----PPPPMRGPTSGGE 174
Query: 806 XEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPPL 922
K PPPP P GPPL
Sbjct: 175 PPPPK-NAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPL 212
Score = 34.7 bits (76), Expect = 0.11
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Frame = +2
Query: 632 PPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRG------XA 793
PPG+ P P GP + + P P APPPP+ + PPP RG
Sbjct: 156 PPGEN--RPPPPMRGPTSGGEPPP-----PKNAPPPPKRGS-SNPPPPPTRGPPSNSFTT 207
Query: 794 QXPDXEXXKIXXXXXXXXXXXXXPPPPXSR-----PXPX*PGNPGPP 919
Q P + PPPP SR P P G PP
Sbjct: 208 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPP 254
Score = 34.7 bits (76), Expect = 0.11
Identities = 34/123 (27%), Positives = 38/123 (30%), Gaps = 10/123 (8%)
Frame = +2
Query: 581 PPXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFK 760
PP + P RG P + PP P +R Q P PPPP +
Sbjct: 184 PPKRGSSNPPPPPTRGPPSNSF--TTQGPPL-PPSRDQAPAPPPPLNATPPPPPPSRDQV 240
Query: 761 KTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXX----------PPPPXSRPXPX*PGNP 910
PPP RG P K PPPP RP P NP
Sbjct: 241 PLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRP-PSGKINP 299
Query: 911 GPP 919
PP
Sbjct: 300 PPP 302
Score = 30.7 bits (66), Expect = 1.7
Identities = 30/112 (26%), Positives = 34/112 (30%), Gaps = 9/112 (8%)
Frame = +2
Query: 614 PXXRGXPPGKXXXNPKXPPXGPETRKQGP-GWRGVFPHX-----APPPPRHKTFKKTPPP 775
P RG K PP P + P G + F + PPPP H PPP
Sbjct: 61 PPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPP 120
Query: 776 XFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*P---GNPGPPL 922
R P PP SRP P P P PP+
Sbjct: 121 PERSSGPPPP------PPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPM 166
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 37.9 bits (84), Expect = 0.011
Identities = 32/113 (28%), Positives = 33/113 (29%)
Frame = +2
Query: 581 PPXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFK 760
PP G P RG PP PP P PPPP +
Sbjct: 288 PPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPS----R 343
Query: 761 KTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
PPP G A P PPP RP P GNP PP
Sbjct: 344 GAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRP-PSSLGNPPPP 395
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 35.9 bits (79), Expect = 0.046
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRGFXXXPGPG 798
GGA G V G G G GGGV GG G PG G
Sbjct: 321 GGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGGPGSG 361
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGG--GXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNV 751
GG G G G GGG G GG GG PG G L +G G +++
Sbjct: 326 GGVGATGGGGGATGGGGGVTGGGGGATGGGGGPGSGGCGEDGTENVSLEFGSGSLISL 383
Score = 29.1 bits (62), Expect = 5.3
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 4/100 (4%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGG----FXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNV 751
GG G G G G GGGG GG GG G + G GG +
Sbjct: 256 GGGGATG-GGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGVGG 314
Query: 750 LCRGGGGAXWGKTPRHPGPCLRVSGPFGGXFGLXXXFPGG 631
GGGG G G +G GG G GG
Sbjct: 315 GATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGG 354
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 34.7 bits (76), Expect = 0.11
Identities = 31/105 (29%), Positives = 34/105 (32%), Gaps = 3/105 (2%)
Frame = +2
Query: 614 PXXRGXPPGKXXXNPKXPPXGPETRKQGP-GWRGVFPHXAPPPPRHKTFKKTP--PPXFR 784
P PP P PP P QGP G +G P P PP F+ P P
Sbjct: 33 PPYEAPPPPPGPPGPDGPPGFPGP--QGPNGPKG--PPGLPGPPGPPGFQGPPGNPAGAI 88
Query: 785 GXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
G P P PP + P PG PGPP
Sbjct: 89 GPPGLPGPNGVNGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPP 133
Score = 34.3 bits (75), Expect = 0.14
Identities = 36/114 (31%), Positives = 41/114 (35%), Gaps = 2/114 (1%)
Frame = +2
Query: 584 PXQXXGXRFXPXXRGXPPGKXXXNPKXPPX--GPETRKQGPGWRGVFPHXAPPPPRHKTF 757
P G P G PPG P PP GP GPG++G H P P+
Sbjct: 548 PPGPPGLPGAPGPNG-PPG--INGPLGPPGEAGPPGNPGGPGYQG--NHGNPAGPQGPNG 602
Query: 758 KKTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
+ PP P E +I PP P S P P PG PGPP
Sbjct: 603 QPGPP-----GVNGPPGEIGEIGPAGLPG------PPGPASPPSP--PGPPGPP 643
Score = 29.1 bits (62), Expect = 5.3
Identities = 31/114 (27%), Positives = 37/114 (32%), Gaps = 2/114 (1%)
Frame = +2
Query: 584 PXQXXGXRFXPXXRGXPPGKXXXNPKXPPX--GPETRKQGPGWRGVFPHXAPPPPRHKTF 757
P G P +G PPG P PP GP GPG++G H P P+
Sbjct: 293 PPGPPGLPGAPGPKG-PPGTN--GPLGPPGDVGPPGNPGGPGYQG--NHGNPAGPQGPNG 347
Query: 758 KKTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
+ PP P + PP P P PG GPP
Sbjct: 348 QPGPP-----GINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGA--PGPKGPP 394
Score = 28.7 bits (61), Expect = 7.0
Identities = 31/114 (27%), Positives = 37/114 (32%), Gaps = 2/114 (1%)
Frame = +2
Query: 584 PXQXXGXRFXPXXRGXPPGKXXXNPKXPPX--GPETRKQGPGWRGVFPHXAPPPPRHKTF 757
P G P +G PPG P PP GP GPG++G H P P+
Sbjct: 378 PPGPPGLPGAPGPKG-PPGTN--GPLGPPGDVGPPGNPGGPGYQG--NHGNPAGPQGPNG 432
Query: 758 KKTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
+ PP P + PP P P PG GPP
Sbjct: 433 QPGPP-----GINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGA--PGPNGPP 479
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 34.7 bits (76), Expect = 0.11
Identities = 30/102 (29%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Frame = +2
Query: 614 PXXRGXPPGKXXXNPKXPPXG-PETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRGX 790
P R PPG +P+ PP G P R PG PH PPP + PP
Sbjct: 477 PHPRVPPPGAP--HPRVPPPGAPHQRVPPPG----APHPRVPPPGAPHPRVPPPGAPHPR 530
Query: 791 AQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGP 916
P ++ PPP S P PG P P
Sbjct: 531 VPPPGAPHPRVPPPGAPHPRV---PPPGASHPRVPPPGAPHP 569
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 34.3 bits (75), Expect = 0.14
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 6/90 (6%)
Frame = +2
Query: 668 PXGPETRKQGPGWRGVFPHXAP-PPPRHKTFKKTPPPXFRGXAQXPDXEXXKIXXXXXXX 844
P P T P H AP PPP PPP A PD +
Sbjct: 1201 PNRPPTTAIPPPMTNTMTHSAPRPPPMGHHMMNMPPPP---PAMPPDGPPKFMGLPPPPP 1257
Query: 845 XXXXXXP-----PPPXSRPXPX*PGNPGPP 919
P PPP P PG PGPP
Sbjct: 1258 GMRPMPPQPPFMPPPPRMQPPGPPGPPGPP 1287
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Frame = +2
Query: 581 PPXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPG---WRGVFPHXAPPPPRHK 751
PP G P P G P PP GP P W+ + PPPP
Sbjct: 376 PPGAGNGPGGPPPPWSKPGGIL---PGPPPPGPPMLNMAPSIPPWQTTPGYIPPPPPGFP 432
Query: 752 TFKKTPPP 775
F+ PPP
Sbjct: 433 QFQPPPPP 440
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.33
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +2
Query: 719 PHXAPPPPRHKTFKKTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX* 898
P PPPP + PPP P PPPP + P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Query: 899 PGNPGPP 919
P P PP
Sbjct: 426 PPPPPPP 432
Score = 31.5 bits (68), Expect = 1.00
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = +2
Query: 719 PHXAPPPPRHKTFKKTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX* 898
P PPPP PPP P PPPP P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 899 PGNPGPP 919
P P PP
Sbjct: 425 PPPPPPP 431
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 822 SPXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
SP PP PP P P P P P P PP
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPP 396
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP +PP P P P P P P PP
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP 402
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 387 PSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 822 SPXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
SP PP P P P P P P P PP
Sbjct: 377 SPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.1 bits (72), Expect = 0.33
Identities = 30/97 (30%), Positives = 30/97 (30%), Gaps = 9/97 (9%)
Frame = +2
Query: 656 PKXPPXGPETRKQGPGWRG--VFPHX-APPPP---RHKTFKKTPPPXFR---GXAQXPDX 808
P PP PET Q P P APPPP T PPP G P
Sbjct: 110 PPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPP 169
Query: 809 EXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
PPPP P P P P PP
Sbjct: 170 IAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPP 206
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 32.7 bits (71), Expect = 0.43
Identities = 31/87 (35%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Frame = -3
Query: 921 RGGPGXPG*XGXGREXG-GGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNVLC 745
RGG G G G R G GGG GG GG G G GGG +
Sbjct: 149 RGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGSGY 208
Query: 744 RGGGGAXWG--KTPRHPGPCLRVSGPF 670
GGGG G R G VS PF
Sbjct: 209 GGGGGYGGGGYGGGRSGGGGYEVSYPF 235
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = -3
Query: 882 REXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNVLCRGGGGAXWG 718
++ GGGG GG GG G S G GGG RGGGG G
Sbjct: 120 KDSGGGGRRGGGYGGGRGGGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGGG 174
>SB_1944| Best HMM Match : DUF1482 (HMM E-Value=7.3)
Length = 491
Score = 32.3 bits (70), Expect = 0.57
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 575 RXPPXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGV 715
R P G P PP +P+ P P+ ++QGPG +G+
Sbjct: 432 RPVPDPPDGQHLSPRPVPDPPDGQHLSPRPVPDPPDGQRQGPGLKGI 478
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 32.3 bits (70), Expect = 0.57
Identities = 21/52 (40%), Positives = 22/52 (42%)
Frame = +2
Query: 581 PPXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPP 736
PP + G P RG PG P PP GP GP RG PH PP
Sbjct: 387 PPKEDWG----PGPRGMGPGMGPPRPMGPP-GPHGPPFGP--RGPPPHGGPP 431
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 656 PKXPPXG-PETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRG 787
P PP G P GPG RG+ P PP P PP RG
Sbjct: 379 PGFPPRGMPPKEDWGPGPRGMGPGMGPPRPMGPPGPHGPPFGPRG 423
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 27.5 bits (58), Expect(2) = 0.61
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 623 RGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPP 775
+G PP PP P PG PPPP F PPP
Sbjct: 266 KGHPPIPSASQNATPPPPPPPPSNTPGMFASSGFQPPPPP-PTDFAPPPPP 315
Score = 23.4 bits (48), Expect(2) = 0.61
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 863 PPPPXSRPXPX*PGNPGPP 919
PPPP P P P PP
Sbjct: 311 PPPPPPEPTSELPPPPPPP 329
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.9 bits (69), Expect = 0.75
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
PP N P P P P P P T GPP
Sbjct: 368 PPPTNKPPPPPPPTNGPPPPPPPTNGPP 395
Score = 31.9 bits (69), Expect = 0.75
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP N P P P P P P T GPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 405
Score = 31.9 bits (69), Expect = 0.75
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP N P P P P P P T GPP
Sbjct: 384 PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 415
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 614 PXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPP 775
P PP PP P T K P P PPPP T PPP
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPP---PTNGPPPPPPPTNGPPPPP 398
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
PP NPP P P P P P PP
Sbjct: 349 PPTNNPPSPPPPTNNTPPPPPPTNKPPP 376
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP N P P P P P P T GPP
Sbjct: 355 PSPPPPTNNTPPPPPP-TNKPPPPPPPTNGPP 385
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 31.5 bits (68), Expect = 1.00
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 623 RGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPP 775
R PP P+ P++RK P V + P R +FK PPP
Sbjct: 985 RSPPPLVSDPKPRDGVSNPDSRKSSPALDQVARPPSQPQERPTSFKSWPPP 1035
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 31.5 bits (68), Expect = 1.00
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -3
Query: 921 RGGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXW-AXPLXWG-GGVFLNVL 748
RGG G G G G GG G GG+ +GG G S SG + + +G GG + N
Sbjct: 209 RGGGGGSGGYGGG-SYGGYGNYGGYSQGGYG-GYADNSWSGGYGSYDGGYGNGGDYSNGY 266
Query: 747 CRGGGGAXWG 718
GGG G
Sbjct: 267 SSYGGGYGGG 276
>SB_56440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 653 NPKXPPXGPETRKQ-GPGWRGVFPHXAPPPPR 745
NP P GP+ Q P W V P +PPP +
Sbjct: 353 NPNPPHNGPKVHPQPSPQWPKVHPQPSPPPEK 384
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRG 822
GG G R G G G G GGG GG RG
Sbjct: 166 GGNGGGRGGGEGGGGRGRGTGGGSRGGGGDGRG 198
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRG 822
GG G R G GN GAGGG+ GG RG
Sbjct: 127 GGRGGWRGRGGGEGN---GAGGGIGRGGGRGRG 156
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 1.7
Identities = 33/112 (29%), Positives = 35/112 (31%)
Frame = +2
Query: 584 PXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKK 763
P Q G P PPG P PP G P G P PPP +
Sbjct: 900 PSQTPGGSESPS--ASPPGGSVPPPPPPPGGNAPLPPPPPG-GSAPSQPPPPGGNAP--- 953
Query: 764 TPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
PPP G A P + PPP S P P P P PP
Sbjct: 954 PPPPPPGGSAPPPGGGAPPLP------------PPPGGSAPPPPPPPPPPPP 993
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +2
Query: 581 PPXQXXGXRFXPXXRGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFK 760
PP P PPG P PP P+ PG G+ P PPPP
Sbjct: 702 PPLLSGTLPMPPPPPPPPPGCAGLPP--PPPSPQ-----PGCAGLPPPPPPPPPGCAGLP 754
Query: 761 KTPPP 775
PPP
Sbjct: 755 PPPPP 759
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 921 RGGPGXPG*XGXGREXGGGGXXGGFXRGG 835
RGG G G G G GGGG GG GG
Sbjct: 336 RGGSGRGGGGGGGGGGGGGGGGGGRGGGG 364
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGGFXRGG 835
GG G G G G GGGG GGF GG
Sbjct: 96 GGGGGFGGGGGGGFGGGGGGGGGFGGGG 123
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRGFXXXPGP 801
GG G G G G G GGG GG GF P
Sbjct: 94 GGGGGGGFGGGGGGGFGGGGGGGGGFGGGGGGGFGSRARP 133
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -3
Query: 921 RGGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGG 766
RG G G G G GGGG GG RGG G G +GGG
Sbjct: 88 RGERGGGGSQGGGYRSGGGGY-GGSSRGGYGGGRGGGGYGGGRGGGGSYGGG 138
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 767 PPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPP 919
PP G A+ + I PPPP RP P P P PP
Sbjct: 172 PPTRLPGNARVNAIDQISIGTSHPTSPSQITQPPPPPPRPPPSPPPPPPPP 222
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
PP PP P P P P P P PP
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPPP 233
Score = 24.2 bits (50), Expect(2) = 7.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 863 PPPPXSRPXPX*PGNPGPP 919
PPPP S P P P PP
Sbjct: 231 PPPPPSPPRPLAAKLPEPP 249
Score = 22.6 bits (46), Expect(2) = 7.6
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +2
Query: 635 PGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPP 742
P + P PP P + P P PPPP
Sbjct: 198 PSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPP 233
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 863 PPPPXSRPXPX*PGNPGPP 919
PPPP P P G P PP
Sbjct: 316 PPPPPPPPPPGDGGAPPPP 334
Score = 23.4 bits (48), Expect(2) = 2.2
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 731 PPPPRHKTFKKTPPPXFRGXAQXP 802
PPPP + PPP G A P
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPP 316
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 822 SPXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
SP P PP P P P P P P GPP
Sbjct: 1352 SPIPSTPRPRPPTPPRPPTPRPRPPTP-RPGPP 1383
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 918 GGPGXPG*XGXGR-EXGGGGXXGGFXRGGXXPGIXXXSXSGXW 793
GG G G G G GGGG GG RGG G SG +
Sbjct: 768 GGGGYRGGGGYGGGHRGGGGYGGGGHRGGSYSGYRGSYKSGGY 810
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/100 (22%), Positives = 31/100 (31%)
Frame = +2
Query: 623 RGXPPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRGXAQXP 802
+ PP + PP P KQ P + P + KK P + A P
Sbjct: 293 KAVPPAPKQVEQRAPPPQPSEEKQD------IPLPSKPTAGARDMKKVLPKELKKPAPPP 346
Query: 803 DXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNPGPPL 922
+ I PP P ++P P PP+
Sbjct: 347 ENSKPTIDAPKPSIPPKKPVPPKPSTKPQIHKKAVPIPPV 386
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Frame = -3
Query: 921 RGGPGXPG*XGXGREXGGG-GXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGG-GVFLNVL 748
R G G G G G G G G GG+ G G G W L WGG G
Sbjct: 440 RCGCGCGGGCGCGCGDGYGYGGYGGYGGCGYG-GYGGYGFPGGWGHGLGWGGPGFGWGGP 498
Query: 747 CRGGGGAXWG 718
GG G WG
Sbjct: 499 GFGGWGHGWG 508
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 840 PXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP P P P P P P T PP
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPP 709
Score = 24.6 bits (51), Expect(2) = 4.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 863 PPPPXSRPXPX*PGNPGPP 919
PPPP S P G PG P
Sbjct: 707 PPPPPSTPPVQQSGAPGSP 725
Score = 23.0 bits (47), Expect(2) = 4.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 719 PHXAPPPPRHKTFKKTPPP 775
P PPPP TPPP
Sbjct: 690 PPPPPPPPPPPPQPSTPPP 708
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRGFXXXPGPGVG 792
GG G G G+ G G GGG GG G+ G G G
Sbjct: 797 GGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDG 839
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/67 (34%), Positives = 24/67 (35%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNVLCRG 739
GG G G G GGGG GG GG G +A GGG G
Sbjct: 801 GGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGG 860
Query: 738 GGGAXWG 718
GGG G
Sbjct: 861 GGGGGGG 867
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGG 766
GG G G G GGGG GG GG G G GGG
Sbjct: 773 GGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGG 823
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRGFXXXPGPGVG 792
GG G G G G G GGG GG G G G G
Sbjct: 772 GGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGG 814
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGG 766
GG G G G G GGGG GG GG G G GGG
Sbjct: 776 GGDGGGGGDGGGG-GGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGG 825
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/86 (24%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = +2
Query: 656 PKXPPXGPETRKQGPGWRGVFPHXA-PPPPRHKTFKKTPPPXFRGXAQXPDXEXXKIXXX 832
P P P RK P P PP P + K PPP D +
Sbjct: 222 PPRPCPAPRVRKTIPSSTDSLPRPGRPPSPSTRGMKPLPPPKKPDVVAEKDQKGGNEAGG 281
Query: 833 XXXXXXXXXXPPPPXSRPXPX*PGNP 910
PPP P P P
Sbjct: 282 TKSHSPPRAKPPPLPRNPPPKDESTP 307
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
PP PP P P P P P P PP
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPPP 1184
>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
Length = 765
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRGFXXXPGPGVG 792
GG G G G G G GGG GG G G G G
Sbjct: 668 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAGAG 710
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRGFXXXPGPGVG 792
GG G G G G G GGG GG G G G G
Sbjct: 666 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAG 708
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 29.1 bits (62), Expect = 5.3
Identities = 34/110 (30%), Positives = 38/110 (34%), Gaps = 3/110 (2%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNV---L 748
GG G G GR GGG G G G G W GGG+ L
Sbjct: 282 GGWGRGSGGGWGRMQGGGMGRGPGGGWGRMQGGMGRGPGGGWGR--MQGGGMGRGPGGGL 339
Query: 747 CRGGGGAXWGKTPRHPGPCLRVSGPFGGXFGLXXXFPGGXPRXXGXNRXP 598
RG GG WG+ G R G G G+ + G R G R P
Sbjct: 340 GRGPGGG-WGR--MQGGGMGRGPGQGWGCRGMGCGWGCGNGRFGGCPRIP 386
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.1 bits (62), Expect = 5.3
Identities = 25/102 (24%), Positives = 29/102 (28%), Gaps = 9/102 (8%)
Frame = +2
Query: 632 PPGKXXXNPKXPPXGPETRKQG---------PGWRGVFPHXAPPPPRHKTFKKTPPPXFR 784
PPGK PP P QG P + P PP + PP
Sbjct: 450 PPGKTTAPTTKPPGSPAGSTQGPTDGVLSAKPPTKKTTPQSMIPPGKPTAPTPKPPGSPV 509
Query: 785 GXAQXPDXEXXKIXXXXXXXXXXXXXPPPPXSRPXPX*PGNP 910
G Q P PP + P P PG+P
Sbjct: 510 GVTQGPTEGVVSAKPPTKKTTPQSMIPPGTKTSPTPKPPGSP 551
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
PP PP P P P P P P PP
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPP 491
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
PP PP P P P P P P PP
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 837 PPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
PP PP P P P P P P PP
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPPP 492
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNVLCRG 739
GGP G G GG + RGG G SG +GGG + R
Sbjct: 778 GGPPRDQNWGRDPREGWGGNRDNYSRGGGG-GYNRGYGSGG-----GYGGGGYNKRGGRY 831
Query: 738 GGGAXWGKTP 709
GG+ WG +P
Sbjct: 832 SGGSNWGSSP 841
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.1 bits (62), Expect = 5.3
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +2
Query: 686 RKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRGXAQXPDXEXXKIXXXXXXXXXXXXXP 865
++Q P W VF + APPPP PPP A P + P
Sbjct: 1648 KRQQP-WYPVFHYPAPPPP--------PPP-----APGPPGPDGPMGLPGPQGPDGPKGP 1693
Query: 866 PPPXSRPXP-X*PGNPGPP 919
P P P P PG PG P
Sbjct: 1694 PGPPGLPGPQGIPGYPGAP 1712
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 632 PPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPP 775
PP K P P P + P P PPPP T + PPP
Sbjct: 1043 PPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPP--STSQPVPPP 1088
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 29.1 bits (62), Expect = 5.3
Identities = 30/90 (33%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGX--XGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNVLC 745
GG G G G G GGGG GG GG G G A GGG+
Sbjct: 1760 GGGGGGGMGGGGGMAGGGGGMGGGGMAAGGGEFGGGEGMGGGGMA---GGGGGMGGGGGG 1816
Query: 744 RGGGGAXWGKTPRHPGPCLRVSGPFGGXFG 655
GGGG G G G GG G
Sbjct: 1817 MGGGGEGMGAAGGGMGAGGEGGGAGGGGGG 1846
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXRGFXXXPGPG 798
GG G G G G AGGG GGE G G G
Sbjct: 1768 GGGGGMAGGGGGMGGGGMAAGGGEFGGGEGMGGGGMAGGGG 1808
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -3
Query: 873 GGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNVLCRGGGGAXWG 718
GGGG GG GG G G A GGG F GGGG G
Sbjct: 1759 GGGGGGGGMGGGGGMAGGGGGMGGGGMAA----GGGEFGGGEGMGGGGMAGG 1806
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 825 PXXFPPXXNPPXXPXPLVPXPXPXNPXTXGPP 920
P PP PP P P P P P P PP
Sbjct: 77 PPAAPPAAPPPPPPLP-APPPPPAQPAPQPPP 107
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 614 PXXRGXPP-GKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXF 781
P G PP G+ P P G PG++ H PP P +++ PP +
Sbjct: 76 PGIGGPPPSGQYGAPPTSQPYGAPPTSGYPGYQ---QHPPPPQPSAQSYNAPPPAGY 129
>SB_49249| Best HMM Match : RRM_1 (HMM E-Value=0.00042)
Length = 792
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +2
Query: 581 PPXQXXGXRFXPXXRGXP-PGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTF 757
PP G P G P P P+ P G + GP RG P PP
Sbjct: 245 PPMDRGGP---PMMHGGPGPRMPHSGPEPVPPGGPPMQGGPNMRGPHPRMDPPRSMSSDI 301
Query: 758 KKTPPPXFRGXAQXP 802
+ RG Q P
Sbjct: 302 RPMHDMGPRGSPQGP 316
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 918 GGPGXPG*XGXGREXGGGGXXGGFXRGGXXPG 823
GG G G G GR GGGG GGF + G
Sbjct: 109 GGGGGYG--GGGRSYGGGGGGGGFYQDSYGGG 138
>SB_52294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -1
Query: 920 GGAXGXRVXRXG-XGNXGXGAGGGVXXGGEXXRGFXXXPGP 801
GG G R R G G G GA GG GG GF GP
Sbjct: 338 GGGRGGRGGRPGRGGRGGRGASGGRGRGG-GRGGFGGGAGP 377
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 665 PPXGPETRKQGP--GWRGVFPHXAPPPPRHKTFKKTPP 772
PP GP R+Q G RG P PPPR + PP
Sbjct: 862 PPPGPGYREQRSWDGRRGSPPPPMAPPPRSASPNHRPP 899
>SB_43492| Best HMM Match : Extensin_2 (HMM E-Value=0.34)
Length = 272
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Frame = +2
Query: 632 PPGKXXXNPKXPPXGPETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXF---RGXAQXP 802
PP +P P R + P RG P PPPP ++TP RG A P
Sbjct: 78 PPWTRARSPVDRARSPVDRARSP--RGTAPEQDPPPPWTVPEQETPVDRARSPRGTAPEP 135
Query: 803 D 805
D
Sbjct: 136 D 136
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 28.3 bits (60), Expect = 9.3
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -3
Query: 891 GXGREXG-GGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGGVFLNVLCRGGGGAXWGK 715
G GR G G G G GG G+ SG A G VF V GGG WG
Sbjct: 226 GHGRTAGVGAGSDSGVGSGGGYGGVG--GGSGGIAY-----GSVFKPVDLGSGGGGSWGG 278
Query: 714 TPRHPGPCLR 685
G CLR
Sbjct: 279 A---GGGCLR 285
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 635 PGKXXXNPKXPPXGPETRKQGPGWRGVFP-HXAPPPPRHKTFKKTPP 772
P P+ P PET PG P AP PP+ KT PP
Sbjct: 154 PETVPPQPETVPPQPETVPPQPGSEEPEPVSQAPEPPKPKTSAPEPP 200
>SB_9191| Best HMM Match : TolA (HMM E-Value=1)
Length = 541
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 665 PPXGPETRKQGP--GWRGVFPHXAPPPPRHKTFKKTPP 772
PP GP R+Q G RG P PPPR + PP
Sbjct: 52 PPPGPGYREQRSWDGRRGSPPPPMAPPPRSASPNHRPP 89
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -1
Query: 920 GGAXGXRVXRXGXGNXGXGAGGGVXXGGEXXR-GFXXXPGPGVG 792
GGA G G G G GGG GG G G GVG
Sbjct: 80 GGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATGGGVG 123
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -3
Query: 921 RGGPGXPG*XGXGREXGGGGXXGGFXRGGXXPGIXXXSXSGXWAXPLXWGGG 766
RGG G G G GGG GG RGG G G +GGG
Sbjct: 182 RGGGGSQG----GGYRSGGGGYGGSSRGGYGGGRGGGGYGGGRGGGGGYGGG 229
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 909 GXPG*XGXGREXGGGGXXGGFXRGG 835
G PG G G GGGG GG GG
Sbjct: 372 GEPGAFGSGSGFGGGGSSGGGGGGG 396
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +2
Query: 623 RGXPPGKXXXNPKXPPXG---PETRKQGPGWRGVFPHXAPPPPRHKTFKKTPPPXFRGXA 793
RG PP P PP G P P +RG P PPP + PP +
Sbjct: 466 RGMPPPPMGMYP--PPRGFPPPPFGPPPPFYRGPPPPRGMPPPPRQRMPSQGPPQVHYPS 523
Query: 794 QXP 802
Q P
Sbjct: 524 QDP 526
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 28.3 bits (60), Expect = 9.3
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Frame = -3
Query: 885 GREXGGGGXXGGF---XRGGXXPG-IXXXSXSGXWAXPLXWGGGVFLNVLCRG---GGGA 727
GR+ GGGG GG+ RGG G G GGG + G GGG
Sbjct: 138 GRDGGGGGYRGGYRGGYRGGYRGGRDRGGGYGGGGEGGYGMGGGDYSGGCGYGSSYGGGG 197
Query: 726 XWGKTPRHPG 697
+G P + G
Sbjct: 198 DYGGGPGYGG 207
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,065,059
Number of Sequences: 59808
Number of extensions: 273045
Number of successful extensions: 2207
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2681370225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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