Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D09
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   4.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.0  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 69  VWLVNSRMSNLKNS 28
           +W  N RM N KNS
Sbjct: 289 IWFQNRRMKNKKNS 302


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 586 LLEDRRLVFCDQIPS 542
           LLE RR+V CD + S
Sbjct: 21  LLEGRRVVDCDDVSS 35


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 510 EHPHLSRRYGLEGIWSQKTRRRSS 581
           EHPH  + YG      Q  RRR++
Sbjct: 22  EHPHQHQHYGAAVQVPQGGRRRAA 45


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 20  HYREFLRFDILEL 58
           HY EF+R+++ EL
Sbjct: 403 HYEEFVRYELGEL 415


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 757 SYILCTGNLFS*CNYAKQYFALSHTL 834
           S++  +G +    NY+  Y +L+H+L
Sbjct: 197 SWLDMSGGMHQMANYSTDYSSLTHSL 222


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 683  IHRKKIVAFL 654
            IHRKKIV FL
Sbjct: 1178 IHRKKIVKFL 1187


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +1

Query: 343 QAYGT--RVLGPGGDSTNYGGRLDW 411
           + +GT  RV  P    T YGGRL W
Sbjct: 75  KVHGTTVRVRPPKVYPTPYGGRLVW 99


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +1

Query: 343 QAYGT--RVLGPGGDSTNYGGRLDW 411
           + +GT  RV  P    T YGGRL W
Sbjct: 389 KVHGTTVRVRPPKVYPTPYGGRLVW 413


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +1

Query: 343 QAYGT--RVLGPGGDSTNYGGRLDW 411
           + +GT  RV  P    T YGGRL W
Sbjct: 622 KVHGTTVRVRPPKVYPTPYGGRLVW 646


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +1

Query: 343 QAYGT--RVLGPGGDSTNYGGRLDW 411
           + +GT  RV  P    T YGGRL W
Sbjct: 622 KVHGTTVRVRPPKVYPTPYGGRLVW 646


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,310
Number of Sequences: 336
Number of extensions: 5515
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)