Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D09
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA... 31 2.0
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 30 4.6
X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein. 29 6.0
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 29 6.0
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 29 8.0
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 29 8.0
AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p pro... 29 8.0
AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-... 29 8.0
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 29 8.0
AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-P... 29 8.0
AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA... 29 8.0
>AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA
protein.
Length = 559
Score = 31.1 bits (67), Expect = 2.0
Identities = 27/95 (28%), Positives = 36/95 (37%)
Frame = +2
Query: 158 ITKKNTPSEAYFQSDTPVTSRGTRKWEEGRSSALWDRTTMDSSVKPVTTERFSMMTAVN* 337
IT +T + TP T+ T + R+S TT ++ P TT + T
Sbjct: 179 ITTSSTTTTPTTTKTTPTTTTPTTTTQTTRTSTTTTPTTTTATTTPTTTTTKTTTTPT-- 236
Query: 338 PARLTAPGS*DPEVTALTTVDVWTGPTRTHKPPLT 442
T P S P T TT TG + T P T
Sbjct: 237 ----TTPTS-TPTTTTTTTTTQTTGTSTTTTPTTT 266
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 29.9 bits (64), Expect = 4.6
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 235 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 408
GG + G GQ D G G G+ + + G G+ G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGRGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 409 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 534
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X62636-1|CAA44502.1| 326|Drosophila melanogaster hrp36.1 protein.
Length = 326
Score = 29.5 bits (63), Expect = 6.0
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 235 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 408
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 409 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 534
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 29.5 bits (63), Expect = 6.0
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 235 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 408
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 409 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 534
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 29.1 bits (62), Expect = 8.0
Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Frame = +1
Query: 235 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 408
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 409 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 534
W + N Q GG G G G N++ S GG
Sbjct: 265 WNQQGGTGGGPWNNQGGGNGGWNGGGGGGGYGGGNSNGSWGG 306
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 29.1 bits (62), Expect = 8.0
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 235 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 408
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 409 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 534
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 268 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 390
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-33
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 268 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 390
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 29.1 bits (62), Expect = 8.0
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 235 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 408
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 409 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 534
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-PB,
isoform B protein.
Length = 325
Score = 29.1 bits (62), Expect = 8.0
Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Frame = +1
Query: 235 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGD--STNYGGRLD 408
GG + G GQ D G G G+ + + G G G GG+ GG
Sbjct: 206 GGPRAGGRGGQGDRGQ-GGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSGG 264
Query: 409 WANKNAQAAIDINRQIGGRSGMTASGSGVWDLDKNTHISAGG 534
W + N Q GG G G G + N++ S GG
Sbjct: 265 WNQQGGSGGGPWNNQGGGNGGWNGGGGGGYG-GGNSNGSWGG 305
>AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA
protein.
Length = 300
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 268 NDDGLFGKAGYNREIFNDDRGQLTGQAYGTRVLGPGGDSTN 390
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,718,848
Number of Sequences: 53049
Number of extensions: 985013
Number of successful extensions: 2688
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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