Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D07
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 204 RGQQGPASPKACSHIGSVV 148
           R  QGP +P    HIG +V
Sbjct: 183 RPHQGPLTPILYDHIGDLV 201


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 593 NFTNKAFFSXH 561
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 593 NFTNKAFFSXH 561
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 35  LRFTYNIRSREVMLRSVLFLFTGVLIAACLTSV 133
           L+  +NI  + V L  V+F+F    I   +  +
Sbjct: 72  LKHIFNILMKNVTLNDVVFIFCSAPIIITILDI 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,843
Number of Sequences: 336
Number of extensions: 3067
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)