Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D07
         (839 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0656 - 30926858-30927040,30927141-30927281,30927373-309274...    32   0.65 
12_02_0131 - 14030721-14030774,14030848-14031027,14032050-140323...    29   4.6  
03_06_0026 - 31118997-31119113,31119700-31119900,31120032-311202...    29   6.1  

>01_06_0656 -
           30926858-30927040,30927141-30927281,30927373-30927489,
           30927696-30927784,30927870-30928010,30928084-30928171,
           30928280-30928342,30928544-30928699,30928778-30928870,
           30929095-30929176,30929426-30929493,30929575-30930633
          Length = 759

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 174 LLAMRALADPYIKL--YSYNQETKKCEEFIYGGCQGERQSFQHIGRMRTEMHKVTD 335
           L+A+R   D  + L   SY  E +KC + + GGC G   SF  + +   ++ K  +
Sbjct: 590 LIALRLADDEILPLNYVSYASELEKCTKLVEGGCTGCPVSFAPLHKSIDQLRKAAN 645


>12_02_0131 -
           14030721-14030774,14030848-14031027,14032050-14032303,
           14034414-14034488,14034682-14034910
          Length = 263

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 154 GADMRAGFWRCGPL 195
           GA +R GFW+CGP+
Sbjct: 64  GASVRLGFWQCGPV 77


>03_06_0026 -
           31118997-31119113,31119700-31119900,31120032-31120218,
           31120339-31120415,31120738-31120815,31120858-31120974,
           31121047-31121175,31121327-31121479,31121589-31122044,
           31122122-31122239,31122385-31122575,31123140-31123415,
           31123524-31123700,31124040-31124141,31124227-31124459,
           31125563-31125764
          Length = 937

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -3

Query: 219 NIA*CRGQQGPASPKA--CSHIGSVVGSSLMTDVKHAAMRTPV 97
           ++A  RG QG  SP+    S + S+  S++ +++KH A  TPV
Sbjct: 52  SVASDRGVQGSVSPEEEISSVLNSIDSSTIASNIKHHAEFTPV 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,292,828
Number of Sequences: 37544
Number of extensions: 347079
Number of successful extensions: 749
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)