BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP03_F_D06 (888 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0012 + 19251085-19251666 30 2.8 02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665 29 3.7 03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 29 4.9 11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347... 29 6.5 03_05_0705 - 26965352-26965542,26965732-26965763,26966141-269662... 29 6.5 01_06_0289 + 28233327-28233815 29 6.5 10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.6 >11_06_0012 + 19251085-19251666 Length = 193 Score = 29.9 bits (64), Expect = 2.8 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = -3 Query: 718 RKRHASRREKGGQVSGK--RAGVGNQESARGS 629 R+RH RR+ GG G+ R GVG+ S G+ Sbjct: 83 RRRHGGRRDSGGGAGGRGSRGGVGDLGSCGGT 114 >02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665 Length = 244 Score = 29.5 bits (63), Expect = 3.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 Query: 715 KRHASRREKGGQVSGKRAGVGNQESA 638 +R RRE+G ++G+R G G +E A Sbjct: 36 RRRERRRERGEGIAGRRGGAGREERA 61 >03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 Length = 356 Score = 29.1 bits (62), Expect = 4.9 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Frame = +3 Query: 345 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPXTV 500 P PRS RC GCG R Q TQR P N IT E TC ++ P + Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203 >11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439, 3476689-3476856,3477414-3477529,3477640-3477792, 3477879-3478022,3478980-3479583 Length = 966 Score = 28.7 bits (61), Expect = 6.5 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 610 PGVSPGSSLVRSPGSRPLPAYRIPVRLS 693 PG SP +SL+ SP LP+ +P+ L+ Sbjct: 506 PGSSPPTSLLPSPSPSDLPSLHLPLALA 533 >03_05_0705 - 26965352-26965542,26965732-26965763,26966141-26966235, 26966737-26966810,26966894-26967029,26967137-26967200, 26967285-26967350,26967445-26967587,26969314-26969407, 26969779-26969902,26970016-26970193,26970273-26970395, 26970884-26970955,26971032-26971139,26972511-26972627, 26972757-26972889,26973209-26973299,26974642-26974722, 26975342-26975421,26975500-26975705,26977417-26977893 Length = 894 Score = 28.7 bits (61), Expect = 6.5 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -3 Query: 691 KGGQVSGKRAGVGNQESARGSFQGKR 614 +GG V G+R G G S RG +G++ Sbjct: 4 RGGGVGGRRGGPGGASSVRGGERGRK 29 >01_06_0289 + 28233327-28233815 Length = 162 Score = 28.7 bits (61), Expect = 6.5 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = -3 Query: 718 RKRHASRREKGGQVSGKRAGVGNQESARG 632 R+RHA RR KGG SG G + ARG Sbjct: 123 RRRHARRRSKGGGGSGDGDCGGLRGGARG 151 >10_08_0940 - 21708557-21708733,21709058-21709142,21709330-21709551, 21710640-21710815,21711883-21711946,21712433-21712507, 21715114-21715199,21715297-21716715 Length = 767 Score = 28.3 bits (60), Expect = 8.6 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%) Frame = +3 Query: 294 NESAN---ARGEAVCVLGALPLPRSLTRCAR 377 +ESAN AR EAV +G +P+ L RC+R Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,560,733 Number of Sequences: 37544 Number of extensions: 488241 Number of successful extensions: 1396 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1358 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1396 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2495239620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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