Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D06
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0012 + 19251085-19251666                                         30   2.8  
02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665     29   3.7  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   4.9  
11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347...    29   6.5  
03_05_0705 - 26965352-26965542,26965732-26965763,26966141-269662...    29   6.5  
01_06_0289 + 28233327-28233815                                         29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>11_06_0012 + 19251085-19251666
          Length = 193

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -3

Query: 718 RKRHASRREKGGQVSGK--RAGVGNQESARGS 629
           R+RH  RR+ GG   G+  R GVG+  S  G+
Sbjct: 83  RRRHGGRRDSGGGAGGRGSRGGVGDLGSCGGT 114


>02_05_0188 + 26587267-26587446,26587733-26587979,26588358-26588665
          Length = 244

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 715 KRHASRREKGGQVSGKRAGVGNQESA 638
           +R   RRE+G  ++G+R G G +E A
Sbjct: 36  RRRERRRERGEGIAGRRGGAGREERA 61


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 345 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPXTV 500
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>11_01_0449 -
           3473662-3475049,3476026-3476128,3476215-3476439,
           3476689-3476856,3477414-3477529,3477640-3477792,
           3477879-3478022,3478980-3479583
          Length = 966

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 610 PGVSPGSSLVRSPGSRPLPAYRIPVRLS 693
           PG SP +SL+ SP    LP+  +P+ L+
Sbjct: 506 PGSSPPTSLLPSPSPSDLPSLHLPLALA 533


>03_05_0705 -
           26965352-26965542,26965732-26965763,26966141-26966235,
           26966737-26966810,26966894-26967029,26967137-26967200,
           26967285-26967350,26967445-26967587,26969314-26969407,
           26969779-26969902,26970016-26970193,26970273-26970395,
           26970884-26970955,26971032-26971139,26972511-26972627,
           26972757-26972889,26973209-26973299,26974642-26974722,
           26975342-26975421,26975500-26975705,26977417-26977893
          Length = 894

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 691 KGGQVSGKRAGVGNQESARGSFQGKR 614
           +GG V G+R G G   S RG  +G++
Sbjct: 4   RGGGVGGRRGGPGGASSVRGGERGRK 29


>01_06_0289 + 28233327-28233815
          Length = 162

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3

Query: 718 RKRHASRREKGGQVSGKRAGVGNQESARG 632
           R+RHA RR KGG  SG     G +  ARG
Sbjct: 123 RRRHARRRSKGGGGSGDGDCGGLRGGARG 151


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 294 NESAN---ARGEAVCVLGALPLPRSLTRCAR 377
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,560,733
Number of Sequences: 37544
Number of extensions: 488241
Number of successful extensions: 1396
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)