Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D06
         (888 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein...    33   1.4  
DQ058013-1|AAY87451.1|  668|Homo sapiens gag protein.                  31   7.4  
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro...    31   7.4  
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro...    31   7.4  
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro...    31   7.4  
AF074086-5|AAD21095.2|  666|Homo sapiens gag protein.                  31   7.4  
AF074086-1|AAF88165.1|  666|Homo sapiens gag protein protein.          31   7.4  

>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
           protein.
          Length = 2294

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = +1

Query: 577 EVAKPDRTIKIPGVSP---GSSLVRSPGSRPLPAYRIPVRLSP 696
           EV  P+ T+K+ G  P   G S  +  G+ PLPA ++PVRL P
Sbjct: 154 EVIYPE-TLKLEGKGPELVGPSESKPRGTSPLPAGQVPVRLQP 195


>DQ058013-1|AAY87451.1|  668|Homo sapiens gag protein.
          Length = 668

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 577 EVAKPDRTIKIPGVSP---GSSLVRSPGSRPLPAYRIPVRLSP 696
           EV  P+ T+K+ G  P   G S  +  G+ PLPA ++PV L P
Sbjct: 153 EVIYPE-TLKLEGKGPELVGPSESKPRGTSPLPAGQVPVTLQP 194


>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
           protein.
          Length = 1117

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 577 EVAKPDRTIKIPGVSP---GSSLVRSPGSRPLPAYRIPVRLSP 696
           EV  P+ T+K+ G  P   G S  +  G+ PLPA ++PV L P
Sbjct: 154 EVIYPE-TLKLEGKGPELVGPSESKPRGTSPLPAGQVPVTLQP 195


>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
           protein.
          Length = 1879

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 577 EVAKPDRTIKIPGVSP---GSSLVRSPGSRPLPAYRIPVRLSP 696
           EV  P+ T+K+ G  P   G S  +  G+ PLPA ++PV L P
Sbjct: 154 EVIYPE-TLKLEGKGPELVGPSESKPRGTSPLPAGQVPVTLQP 195


>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
           protein.
          Length = 1177

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 577 EVAKPDRTIKIPGVSP---GSSLVRSPGSRPLPAYRIPVRLSP 696
           EV  P+ T+K+ G  P   G S  +  G+ PLPA ++PV L P
Sbjct: 154 EVIYPE-TLKLEGKGPELVGPSESKPRGTSPLPAGQVPVTLQP 195


>AF074086-5|AAD21095.2|  666|Homo sapiens gag protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 577 EVAKPDRTIKIPGVSP---GSSLVRSPGSRPLPAYRIPVRLSP 696
           EV  P+ T+K+ G  P   G S  +  G+ PLPA ++PV L P
Sbjct: 154 EVIYPE-TLKLEGKGPELVGPSESKPRGTSPLPAGQVPVTLQP 195


>AF074086-1|AAF88165.1|  666|Homo sapiens gag protein protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 577 EVAKPDRTIKIPGVSP---GSSLVRSPGSRPLPAYRIPVRLSP 696
           EV  P+ T+K+ G  P   G S  +  G+ PLPA ++PV L P
Sbjct: 154 EVIYPE-TLKLEGKGPELVGPSESKPRGTSPLPAGQVPVTLQP 195


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,006,320
Number of Sequences: 237096
Number of extensions: 2593277
Number of successful extensions: 11909
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11909
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)