Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D05
(846 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 44 2e-04
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 42 8e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 40 0.002
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 39 0.004
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 38 0.010
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 38 0.010
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.010
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.014
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 38 0.014
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.018
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.018
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.018
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.018
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 37 0.024
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 37 0.024
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 36 0.055
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 36 0.055
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.095
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 34 0.13
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.13
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.17
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 33 0.22
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.29
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 32 0.51
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.67
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 31 0.89
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 31 0.89
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 31 1.6
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.7
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 29 6.3
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 28 8.3
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +3
Query: 231 HAVLFGGTCGGSIISPKWILTAGHCTLFTN--GHYVLAGTNKSDDQSGI--IRYVKRMVI 398
H G CGGS+I+P+W+LTAGHC L + + V+ G D G I +V+R++
Sbjct: 80 HVTPHGFVCGGSLIAPQWVLTAGHCILTEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIK 139
Query: 399 HPLFSVG-PYWLDVEDFNLKQVA 464
HP +S PY DV L + A
Sbjct: 140 HPHYSRDVPYDNDVALLQLSRPA 162
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 48.4 bits (110), Expect = 7e-06
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCT---LFTNGHYVLAGT-NKSDDQSGIIRYVKRMVI 398
CGG++ISP W+LTAGHC L +G+ V+ GT N+S + I+ Y +R ++
Sbjct: 461 CGGTLISPDWVLTAGHCVHGQLDPSGYTVVVGTLNQSALSAPILEYQERSIL 512
Score = 33.9 bits (74), Expect = 0.17
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGG++IS +W++TA HC
Sbjct: 872 CGGALISDRWVVTASHC 888
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 46.8 bits (106), Expect = 2e-05
Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 1/173 (0%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVGPYWLD 434
CGG++++P+W++TA HC + N + D S R+ I + + Y
Sbjct: 657 CGGTLVTPEWVITAAHCVVDKNPASIQVRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSP 716
Query: 435 VEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGTDEHGG 614
N D + +D + P G G+GT GG
Sbjct: 717 KRSSN--------DIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSSGG 768
Query: 615 VMRKDMHAMELSTQSDEVCSK-LEQYXSLDMICAKGRPPRFDSACNGDSGSGL 770
+ ++ + ++ C + S DMICA G P C GDSG L
Sbjct: 769 SQPEALNQAVVPLRTRSECERSYPGKISADMICA-GNPEGGVDTCQGDSGGPL 820
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 44.0 bits (99), Expect = 2e-04
Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 8/180 (4%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNG----HYVLAGTNKSDDQSGIIRYVK--RMVIHPLFSV 416
CGGS+I P WILT+ HC N + G + G ++ ++ IHP V
Sbjct: 15 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEIIQGDQLYIHPGLVV 74
Query: 417 GPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYG 596
G + D+++ + + + V NL G G+G
Sbjct: 75 GDL-ISPGDYDVALIKLK---------RPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWG 124
Query: 597 TDEHGGVMRKDMHAMELSTQSDEVCSKLEQYXSL--DMICAKGRPPRFDSACNGDSGSGL 770
G ++ +E+ S EVC+ + Y D G P +C GDSG L
Sbjct: 125 KTAEGSPYSPVLNELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSGGPL 184
Score = 34.3 bits (75), Expect = 0.13
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I +W++T+GHC
Sbjct: 276 CGGSLIDKQWVVTSGHC 292
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGI--IRYVKRMVIHPLFS 413
CGGS++SP W++TA HC + T + V+ G + + G VKR++ HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYN 150
Score = 36.3 bits (80), Expect = 0.031
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I P+W+LTA HC
Sbjct: 690 CGGSLIHPQWVLTATHC 706
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCT--LFTNGHYVLAGTNKSDDQSGIIR--YVKRMVIHP 404
CGG+++ P+W++TA HC L T YV G + D ++G + ++R+ +HP
Sbjct: 275 CGGTLVHPRWVVTASHCVHKLTTGDLYVRMGAHWKDGKTGSEQDFRIQRIFMHP 328
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 252 TCGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSD--DQSGIIRYVKRMVIHPLFSVGPY 425
TCG ++I P W +TA HC + + + V+ G++ D + S V+R+ H FS+ Y
Sbjct: 352 TCGATLIRPGWAITAAHCVMRPDKYTVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANY 411
Query: 426 WLDVEDFNLKQVA 464
D+ L++ A
Sbjct: 412 VDDIALLELERSA 424
Score = 34.3 bits (75), Expect = 0.13
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 252 TCGGSIISPKWILTAGHC 305
+CGG++IS +W++TA HC
Sbjct: 55 SCGGTLISDRWVVTASHC 72
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 41.5 bits (93), Expect = 8e-04
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNGH 326
CGGS+IS KW+LTA HC NG+
Sbjct: 133 CGGSLISEKWVLTAAHCVTHRNGN 156
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 41.5 bits (93), Expect = 8e-04
Identities = 46/186 (24%), Positives = 67/186 (36%), Gaps = 11/186 (5%)
Frame = +3
Query: 246 GGTCGGSIISPKWILTAGHCTLFTN----GHYVLA-GTNKSDDQSGIIRYV--KRMVIHP 404
G CGGSII P W++TAGHC + + G VL + S G +Y R+ +HP
Sbjct: 7 GHWCGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHP 66
Query: 405 LFSVGPYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGY 584
F +G +D + + D P G
Sbjct: 67 GFVIGGV----------SHPGYYDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYL 116
Query: 585 AGYG-TDEHGGVMRKDMHAMELSTQSDEVCSKLEQYXSL---DMICAKGRPPRFDSACNG 752
G+G T GV + +++ + VC+ Y + +CA G C G
Sbjct: 117 TGWGETVLDSGVFSPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCA-GYNQGGQDGCLG 175
Query: 753 DSGSGL 770
DSG L
Sbjct: 176 DSGGPL 181
Score = 35.5 bits (78), Expect = 0.055
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I P WILT+ HC
Sbjct: 275 CGGSLIDPYWILTSSHC 291
Score = 34.3 bits (75), Expect = 0.13
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I +W++T+GHC
Sbjct: 561 CGGSLIDKQWVVTSGHC 577
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNG--HYVLA-GTNKSDDQSGIIRY--VKRMVIHPLFS 413
CGGS+++P+WI+TA HC ++ Y +A G + + G + V+R+++HP ++
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYA 192
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 41.1 bits (92), Expect = 0.001
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 10/179 (5%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGIIRY-VKRMVIHPLFSV-G 419
CGG++I +W++TA HC + + + + G + + G + V + +H F G
Sbjct: 314 CGGTLIDTEWVVTAAHCVFQNIEPSNYKIKLGAHDRESSEGALTIPVTAIHMHTRFMTDG 373
Query: 420 PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDD-QPNLPIGVDVGYAGYG 596
Y D+ L A G TI A L + G G+G
Sbjct: 374 SYGYDIAIMKLANPA---------------PIGHTISPACLPGLYDQVTSGTMCYVTGWG 418
Query: 597 TDEHGGVMRKDMHAMELSTQSDEVCSKL-EQYXSLD---MICAKGRPPRFDSACNGDSG 761
E+G + + + S E C ++ ++ +D M+CA S C+GDSG
Sbjct: 419 MTEYGNAGARLLQQARIPVVSSEECERVNNKHRKVDKVTMLCAGNGGNSSISGCHGDSG 477
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 40.3 bits (90), Expect = 0.002
Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 17/189 (8%)
Frame = +3
Query: 246 GGTCGGSIISPKWILTAGHCTLFTNG--HYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVG 419
G CGGS+++P W+LTA HC L + + V+ G G + + ++ ++ G
Sbjct: 55 GFICGGSLVAPGWVLTAAHCILSDDASKYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYG 114
Query: 420 ---PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAG 590
P DV L+ + DF T+ + D ++ IG D G
Sbjct: 115 NPVPNANDVALLKLRDYPTKTDFV------------NTVCLPQYMD--HVEIGKDCFITG 160
Query: 591 YGTDEHGGVMRKDMHAMELSTQSDEVCS---------KLEQ---YXSLDMICAKGRPPRF 734
+G + G + +L S+ CS +LE + M+CA
Sbjct: 161 WGRSYYPGPTANKLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAGKTG 220
Query: 735 DSACNGDSG 761
+ CNGDSG
Sbjct: 221 KNGCNGDSG 229
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNG---HYVLAGTNK 350
CGGS++SP W+LTA HC + +N + V+ G +K
Sbjct: 56 CGGSLLSPLWLLTAAHCVIRSNNSADYTVIVGAHK 90
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = +3
Query: 252 TCGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGIIRYVK--RMVIHPLFS 413
TCGGS+IS +W++TA HC G+ V+ G +K + + + ++ +++ HP ++
Sbjct: 131 TCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYN 189
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 252 TCGGSIISPKWILTA 296
TCGGS+IS +W++TA
Sbjct: 454 TCGGSLISDRWVVTA 468
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTN--GHYVL-AGTNK--SDDQSGIIRYVKRMVIHPLFSVG 419
CG S++SP W LTA HC ++ Y L AG ++ +D + ++R V +++ H FS+G
Sbjct: 111 CGASLLSPGWALTAAHCVQRSSNPADYTLAAGAHRRVNDAHAQVLR-VSQVISHKEFSMG 169
Query: 420 PYWLDV 437
DV
Sbjct: 170 HLRNDV 175
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNGHYVLAGTN-KSDDQSGIIRYVKRMVIHP 404
CGGS+I P W+LTA HC + L G + +S+ G + +K I P
Sbjct: 57 CGGSLIDPGWVLTAAHCLVGEQPDSALLGAHYRSNKTVGTEKDIKVAQIIP 107
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +3
Query: 252 TCGGSIISPKWILTAGHCTL---FTNGHYVLAG 341
+CGG++IS KW++TA HC + F + V+AG
Sbjct: 501 SCGGALISSKWVITAAHCVIEYPFPQVYEVIAG 533
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 37.9 bits (84), Expect = 0.010
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I+P+W+LTA HC
Sbjct: 63 CGGSLITPEWVLTAAHC 79
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 37.9 bits (84), Expect = 0.010
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I+P+W+LTA HC
Sbjct: 106 CGGSLITPEWVLTAAHC 122
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +3
Query: 246 GGTCGGSIISPKWILTAGHCTLFT------NGHYVLAGTNKSDDQSGIIR--YVKRMVIH 401
G CGG+++SP+W++TA HC N + G +K G + V R+++H
Sbjct: 374 GHHCGGTLVSPQWVVTAAHCVDHVKDPKNYNELAITLGEHKRSASEGTEQRFSVARIIVH 433
Query: 402 PLF 410
P +
Sbjct: 434 PQY 436
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 37.5 bits (83), Expect = 0.014
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I+P+WILTA HC
Sbjct: 37 CGGSLIAPQWILTATHC 53
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.1 bits (82), Expect = 0.018
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I P+W+LTA HC
Sbjct: 286 CGGSLIHPEWVLTAAHC 302
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 37.1 bits (82), Expect = 0.018
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 6/178 (3%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC--TLFTNGHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVGPYW 428
CGG+++ W++TA HC + + + +++GI+ +R+ I ++ Y
Sbjct: 240 CGGALVHEDWVVTASHCINDIRPEDYKTHIISLGGHNKTGIMSVEQRIGIAKIYLHADYN 299
Query: 429 LDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGTDEH 608
L +N D V D + P G + G+G
Sbjct: 300 LYPHQYNN-------DVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITGWGRLHS 352
Query: 609 GGVMRKDMHAMELSTQSDEVCSKLEQY----XSLDMICAKGRPPRFDSACNGDSGSGL 770
GG + + + S C+K Y S M+CA + P D+ C GDSG L
Sbjct: 353 GGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCA--QVPGIDT-CQGDSGGPL 407
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 37.1 bits (82), Expect = 0.018
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTL---FTNGHYVLAGTNK 350
CGGS++S W+LTA HC + T+ + V+ G +K
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHK 374
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.1 bits (82), Expect = 0.018
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I P+W+LTA HC
Sbjct: 246 CGGSLIHPEWVLTAAHC 262
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 36.7 bits (81), Expect = 0.024
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 222 RFPHAVLFGGTCGGSIISPKWILTAGHCTLFTN 320
RF H+ CGG++I+ +W+LTA HC TN
Sbjct: 146 RFDHSGNQMQICGGALINREWVLTAAHCFYKTN 178
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 36.7 bits (81), Expect = 0.024
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGG++ISP W+LTA HC
Sbjct: 574 CGGNVISPWWVLTAAHC 590
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 36.7 bits (81), Expect = 0.024
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I P+WILTA HC
Sbjct: 80 CGGSLIHPQWILTATHC 96
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.9 bits (79), Expect = 0.041
Identities = 11/22 (50%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +3
Query: 243 FGGT-CGGSIISPKWILTAGHC 305
+GG CGG+++ P+W++TA HC
Sbjct: 161 YGGQFCGGTLVHPQWVITAAHC 182
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.5 bits (78), Expect = 0.055
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC------TLFTNGHYVLAGTNK---SDDQSGIIRYVKRMVIHPL 407
C GS+I +WI+TAGHC + + VL G + S + VKR+++HP
Sbjct: 79 CAGSLIEARWIITAGHCFKDPRSSADPDKWKVLLGERRRHSSKRHFERAQQVKRIIVHPK 138
Query: 408 FS 413
F+
Sbjct: 139 FN 140
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.5 bits (78), Expect = 0.055
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 246 GGTCGGSIISPKWILTAGHC 305
G CGGSI++ +WI+TA HC
Sbjct: 1806 GHICGGSIVNSQWIVTAAHC 1825
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 35.1 bits (77), Expect = 0.072
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC-TLFTNGHYVLAGTNKSD----DQSGIIRYVKRMVIHPLFSVG 419
CGG++I+ W+LTA HC F+ SD D G +K + +HP ++
Sbjct: 1266 CGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYNSS 1325
Query: 420 PYWLDVEDFNLKQVA 464
+ D+ L+Q A
Sbjct: 1326 SHEHDLAVLQLQQPA 1340
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.1 bits (77), Expect = 0.072
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNG---HYVLAGTNKS--DDQSGIIRYVKRMVIHPLFS 413
CGGS++S W++TA HC ++ + ++ G + ++ + VK+++ HP ++
Sbjct: 502 CGGSLVSSTWVVTAAHCVARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYN 559
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 34.7 bits (76), Expect = 0.095
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +3
Query: 234 AVLFGGT--CGGSIISPKWILTAGHC 305
A+L GT CGGS+++ W++TA HC
Sbjct: 70 ALLMNGTQFCGGSLVNENWVVTARHC 95
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 34.3 bits (75), Expect = 0.13
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I +W+LTA HC
Sbjct: 68 CGGSLIDSEWVLTAAHC 84
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTN--GHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSV 416
CG S+++P W LTA HC ++ Y L + G + + ++ H FS+
Sbjct: 266 CGASLLTPGWALTAAHCLTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSM 321
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 702 MICAKGRPPRFDSACNGDSGSGL--XEXXRAAGGGLPSWV 815
MICA G SACNGDSG L E R G+ SWV
Sbjct: 458 MICAGGAG---SSACNGDSGGPLQCLENERWVLRGVASWV 494
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 34.3 bits (75), Expect = 0.13
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLF 314
CGG++I+ W+LTA HC ++
Sbjct: 1192 CGGTLIAEDWVLTAAHCVVY 1211
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 33.9 bits (74), Expect = 0.17
Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 2/174 (1%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSDDQSGIIRYVKRMVIHPLFSVGPYWLD 434
CGGS++ WI+TA HC + + N ++ V + HP Y +
Sbjct: 66 CGGSLVPEDWIVTAAHCFDSNRLRWRVVAGNDMPSKAVNTTGVSAIWRHP-----QYKSN 120
Query: 435 VEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGTDEHGG 614
+ +L+ +D KT+ + + + D AG+G GG
Sbjct: 121 IA--SLESGPCDYDVALVKLEKSVATTPKTVPICLVPRDTPRDLKRDCYVAGWGRRSFGG 178
Query: 615 VMRKDMHAMELSTQSDEVCSKLEQYXSLDMICAKGRPPRFDSA--CNGDSGSGL 770
+ +++ E+C+ Y + A PR C DSG L
Sbjct: 179 EQSLALREVQVHMVPRELCNSANSYGGVIHERALCAGPREGGCGPCQFDSGGPL 232
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +3
Query: 234 AVLFGGT---CGGSIISPKWILTAGHC 305
A+ GT CGGS+I +W++TA HC
Sbjct: 43 ALFLNGTHHRCGGSVIKSQWVVTAAHC 69
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 33.5 bits (73), Expect = 0.22
Identities = 42/178 (23%), Positives = 62/178 (34%), Gaps = 9/178 (5%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC---TLFTNGHYVLAGTNKSDDQSGIIR--YVKRMVIHPLFSVG 419
CGGS+I+ W++TA HC +G+ V+ G + + + +K++ H FS+
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116
Query: 420 PYWLDVEDFNLKQVAARWDFXXXXXXXXXXXDGKTIKVATLDDQPNLPIGVDVGYAGYGT 599
D+ L + D K V G G+G
Sbjct: 117 HLKNDIALLQLHEPVKASD--------------KVNTVCLPSSGSRAQAGARCYITGWGR 162
Query: 600 DEHGGVMRKDMHAMELSTQSDEVC----SKLEQYXSLDMICAKGRPPRFDSACNGDSG 761
GG + L D C +L S MICA G+ C GDSG
Sbjct: 163 TVGGGSAAGILQQAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQG---KGGCQGDSG 217
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 219 ERFP-HAVLFGGT-CGGSIISPKWILTAGHCTLFTNGHY 329
ER+P H V+ T C G+++SP+ +LTA HC L T Y
Sbjct: 154 ERYPFHTVVKLSTGCTGTLVSPRHVLTAAHC-LHTGRDY 191
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 33.5 bits (73), Expect = 0.22
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I W+LTA HC
Sbjct: 417 CGGSLIHSNWVLTAAHC 433
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.1 bits (72), Expect = 0.29
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGGS+I+ +W++TA HC
Sbjct: 460 CGGSLINREWVVTAAHC 476
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 225 FP-HAVLFGGTCGGSIISPKWILTAGHCTLFTNGHYVLAGTNKSDD 359
FP HA + C G+++SP+W++TA C ++ ++ K+DD
Sbjct: 41 FPWHAYIPELQCSGALVSPRWVVTAASCLKQSSSPFI--SRVKTDD 84
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 177 TEITKTQSDVKAVHERFPHAVLF-GGTCGGSIISPKWILTAGHCTLFTNGHYVLAG 341
TE+ Q + +++ + A F C G ++ PK +LTA HC H + G
Sbjct: 97 TELKGAQRESRSIRRKLRRAQRFCPWGCTGVLVGPKHVLTAAHCVANEKPHNLKVG 152
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 32.3 bits (70), Expect = 0.51
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 243 FGGTCGGSIISPKWILTAGHC 305
+G CGG++++ +W+LTA C
Sbjct: 280 YGPVCGGTLLTSEWVLTAARC 300
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 31.9 bits (69), Expect = 0.67
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC-----TLFTNGHYVLAGTNKSDDQSGIIRYVK--RMVIHPLFS 413
CGG++I+ W++TA HC + + V G + + G + V+ +V+HPL +
Sbjct: 749 CGGALIARDWVVTAAHCFYYDGKIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLAN 808
Query: 414 VGPYWLDVEDFNLK 455
DV LK
Sbjct: 809 KNGLDFDVALIQLK 822
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 31.5 bits (68), Expect = 0.89
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGG++I +W++TA HC
Sbjct: 73 CGGALIDREWVVTAAHC 89
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 221 FVYCFHIRLCLCNFSCYQRRFLF*IRYVIGAGLR*RARTCRQ 96
FV C R C CN +C R LF + Y I + CRQ
Sbjct: 106 FVLCTCHRACSCNVACCVRAMLFFVLYCIVLATCCLSNACRQ 147
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.7 bits (66), Expect = 1.6
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGG+++ P++++TA HC
Sbjct: 50 CGGTLVHPRFVVTASHC 66
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.9 bits (64), Expect = 2.7
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 255 CGGSIISPKWILTAGHC 305
CGG+++ +W++T HC
Sbjct: 54 CGGALVHERWVVTGAHC 70
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 636 RAYLYASRPHARQFRSQHIRRRLRLV 559
R Y+ R ARQ+R QHI++ LR V
Sbjct: 2977 RVYINTGRALARQYRYQHIQQLLRCV 3002
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 186 TKTQSDVKAVHER-FPHAVLFGGTCGGSIISPKWILTAGHCTLFTNGHYVLA 338
T+ + ++AV F V C G++IS + +LT+ HC + + Y+++
Sbjct: 155 TRLEIPIRAVRRTPFSSIVHISTGCTGTLISTRHVLTSAHC-VHDSSEYIIS 205
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 HTGFKTKICAGNN*NYKDTV*CESSTRKVSTCRS-FRWYLWRFH 268
+ G+K+ +CAG N N T C + C++ RW W H
Sbjct: 282 NVGWKSMLCAGYNDNKTQTSGCIGDSGGPLMCKAGDRWSKWVLH 325
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 591 YGTDEHGGVMRKDMHAMELSTQSDEVCSKLEQYXSLDMICAKGRPPRFDSACNGDSG 761
+G GG + +E+ S CS+ M+CA GR +C GDSG
Sbjct: 2 WGRTAEGGSSPTVLMQVEVPIVSASTCSRAYSRLHESMVCA-GRASGGIDSCQGDSG 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,957,152
Number of Sequences: 59808
Number of extensions: 575267
Number of successful extensions: 1509
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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