Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_D04
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 4e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 6e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.056
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.073
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.22
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.22
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.30
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.52
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.90
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 6.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.3 bits (90), Expect = 4e-04
Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGXG 867
PPPP + PT P P PPP P + PP P G P PP G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 868 R-XPPAP 885
R PAP
Sbjct: 791 RYYAPAP 797
Score = 32.7 bits (71), Expect = 0.073
Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Frame = +1
Query: 691 PPPXASXXPPTXPPXXNPSPPPXXPXL-------PSXPPAPXQXGXXLFFXPXXKXTPPP 849
P P PP P P PPP P + P PP G ++ P + P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Query: 850 R 852
+
Sbjct: 804 K 804
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +2
Query: 656 QKKXSLXXEXXPPXPXLRXDPPXPXPXQTPAPPPXXPXFPLXPPPRXXXG 805
+++ L PP P + P P P P P P P PPP G
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +1
Query: 742 PSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGXGRXPPAPP 888
P PP P+ P P + P PPP G G PP PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGP-PPPPPPPGVAGAGPPPPPPP 781
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 656 QKKXSLXXEXXPPXPXLRXDP-PXPXPXQTPAPPPXXPXFPLXPPPRXXXGXP 811
Q+K L PP + P P P P PAP P P PP G P
Sbjct: 724 QQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.5 bits (88), Expect = 6e-04
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXP-XLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PP P PP+ PP PS PP P P+ PP P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS-APIAPPLPAGMPAAPPLPPAA 473
Query: 865 GRXPPAP 885
PPAP
Sbjct: 474 PAPPPAP 480
Score = 35.5 bits (78), Expect = 0.010
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +1
Query: 706 SXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGXGRXPPAP 885
S P PP PS PP P PS PP+ P PP G PP P
Sbjct: 413 STPPVPTPPSLPPSAPPSLP--PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 886 P 888
P
Sbjct: 471 P 471
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPP----RX 855
PPPP S PP N S P P PP + P + PPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLP--PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Query: 856 RGXGRXPP 879
GR PP
Sbjct: 370 PSTGRQPP 377
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGXG 867
PPP P PP N S P +P+ P P L PP G
Sbjct: 391 PPPAIPGRSAPALPPLGNAS-RTSTPPVPTPPSLPPSAPPSL-----PPSAPPSLPMGAP 444
Query: 868 RXPPAPP 888
PP PP
Sbjct: 445 AAPPLPP 451
Score = 29.1 bits (62), Expect = 0.90
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = +1
Query: 679 GXGPPPPXASXXPPTXPPXXNPS----PPP-XXPXLPSXPPAP 792
G P PP PP PP PS PPP S PPAP
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPA 789
PP P P PP P+PPP P+ P A
Sbjct: 457 PPLPAGMPAAPPLPPAA-PAPPPAPAPAPAAPVA 489
Score = 27.5 bits (58), Expect = 2.8
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 18/84 (21%)
Frame = +1
Query: 691 PPPXASXXPPTXPPXXN-PSPPPXXP----XLPSXPPAPXQXGXXLFFXPXXKXT----- 840
PP S PP P + P+PPP P + S P +P + + P T
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 841 PPPRXR--------GXGRXPPAPP 888
PPP R R PP PP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPP 316
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +1
Query: 697 PXASXXPPTXPPXXNPSPPPXXPXL--PSXPPAP 792
P ++ PP P + PP P L P+ PP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIP 257
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.014
Identities = 24/75 (32%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPP---XXPXLPS-XPPAPXQXGXXLFFXPXXKXTPPPRX 855
PP P + PPT P PPP P +PS PP P K +PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK-SPPSAP 188
Query: 856 RGXGRXPPAPPXXTP 900
PP PP P
Sbjct: 189 SLPSAVPPMPPKVPP 203
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Frame = +1
Query: 694 PPXASXXPPTXPPXXNPSPPPXX---PXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PP ++ P+ PP S PP P +PS P P Q + P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 865 GRXPPAPPXXTP 900
+ PP P P
Sbjct: 199 PKVPPPPLSQAP 210
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +1
Query: 688 PPPPXAS-XXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPP 849
PP P ++ P PP + PPP P P P P P PPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP-PSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 691 PPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAP 792
PPP P PP P P P PP P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.056
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 694 PPXASXXPPTXPPXXNPSPPPXXPXLPSXPPA 789
PP S P PP P PPP P +P+ PP+
Sbjct: 1699 PPQMSAPTPPPPPMSVP-PPPSAPPMPAGPPS 1729
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLP--SXPPAP 792
PPPP + PP+ PP P P LP S P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAP 792
PPPP S PP PS PP PS PP P
Sbjct: 1707 PPPPPMSVPPP-------PSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAP 792
PP S PP P PP P PS PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 716 PPXPXPXQTPAPPPXXPXFPLXPPPRXXXGXPFS 817
P P P + PPP P P PP P S
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.073
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPP-PRXRGX 864
PP P S PP P P P PS PP + P PP P G
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG- 1090
Query: 865 GRXPPAP 885
PP P
Sbjct: 1091 --IPPVP 1095
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXR-GX 864
PP P S PP P + + PP PP P P + P P+ G
Sbjct: 1150 PPVPAPSGAPPVPKP--SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 865 GRXPP---APPXXTP 900
PP APP TP
Sbjct: 1208 PPVPPPSTAPPVPTP 1222
Score = 30.3 bits (65), Expect = 0.39
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGXG 867
PP P S PP P +PP P + + PP P G P P P G
Sbjct: 1083 PPVPAPSGIPPVPKPSV-AAPPVPKPSV-AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 868 RXP----PAPPXXTP 900
P APP P
Sbjct: 1141 PVPKPSVAAPPVPAP 1155
Score = 30.3 bits (65), Expect = 0.39
Identities = 21/74 (28%), Positives = 25/74 (33%)
Frame = +1
Query: 679 GXGPPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXR 858
G P P A+ PP PP + +PP P + PP P P P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPP--SEAPPVPKPSV-GVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Query: 859 GXGRXPPAPPXXTP 900
PAP P
Sbjct: 1234 AKAPPVPAPSSEAP 1247
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLFFXPXXKXTPPPRXRGXG 867
PP P S P P +PP P + + PP P G P P P G
Sbjct: 1102 PPVPKPSVAVPPVPAPSG-APPVPKPSVAA-PPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Query: 868 RXP----PAPPXXTP 900
P APP P
Sbjct: 1160 PVPKPSVAAPPVPAP 1174
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 7/73 (9%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSP---PPXXPXLP----SXPPAPXQXGXXLFFXPXXKXTPP 846
PP P S PP P P P P +P + PP P G P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP--VPKPSVAAP 1169
Query: 847 PRXRGXGRXPPAP 885
P PP P
Sbjct: 1170 PVPAPSSGIPPVP 1182
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 689 PPXPXLRXDPPXPXPXQTPAPPPXXPXFPLXPPP 790
PP P PP P P P P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/62 (35%), Positives = 24/62 (38%)
Frame = -1
Query: 899 GVXXGGAGGXRPXPRXRGGGVXFXXGKKKRXXPXWXGAGGXEGRXGXXGGGLGFXXGGXV 720
G GG+GG P P GG F G + G GG G GG G GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGF--GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 719 GG 714
GG
Sbjct: 249 GG 250
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -3
Query: 789 GGGXRGKXGXXGGGAGVXXGXGCGGSXRSXGXGGXXS 679
GGG RG G GG G G GG R G GG S
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG-RGRGRGGARS 481
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 727 PPXXNPSPPPXXPXLPS--XPPAPXQXGXXLFFXPXXKXTPPP-RXRGXGRXPPAP 885
P PS PP P LPS P P + G + PPP R + PP P
Sbjct: 100 PSYSQPSQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMPPPP 155
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.52
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPP 756
PPPP PP+ PP P PPP
Sbjct: 11 PPPPPPGFEPPSQPP---PPPPP 30
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 730 PXXNPSPPPXXPXL--PSXPPAPXQXG 804
P NP PPP P PS PP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 715 PPTXPPXXNPSPPPXXPXLPSXPPAP 792
PP PP P P P P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.90
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 786 GGXRGKXGXXGGGAGVXXGXGCGGSXRSXGXGG 688
GG G G GGG G G G GG+ G G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -3
Query: 792 RGGGXRGKXGXXGGGAGVXXGXGCGGSXRSXGXGGXXSXXR 670
RGG G+ G GGG G G G GG + G G S R
Sbjct: 25 RGGFGGGRGGARGGGRGGARG-GRGGRGGARGGRGGSSGGR 64
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Frame = +1
Query: 697 PXASXXPPTXPPXX----NPSPPPXXPXL-PSXPPAP 792
P + PPT P +P PPP + PS PPAP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +1
Query: 688 PPPPXASXXPPTXPP----XXNPSPPPXXPXLPSXPP 786
PPPP S P+ PP N S P P PP
Sbjct: 745 PPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPP 781
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 691 PPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAP 792
P P A+ P P P P P +PS P P
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRP 548
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAP 792
P PP A P P P P P +PS P P
Sbjct: 590 PQPPVAPVVPEA-PSVPQPPVAPVAPEVPSVPQRP 623
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/73 (26%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Frame = +1
Query: 694 PPXASXXPPTXPPXXNPSPPPXXPXLPSXPPAPXQXGXXLF-----FXPXXKXTPPPRXR 858
PP A+ + P NP PPP P A + P T P+
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQA 232
Query: 859 GXGRXPPAPPXXT 897
PP PP T
Sbjct: 233 DPLPAPPPPPPPT 245
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSX-PPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PPP PP + P P P P + P PPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 865 GRXPPAPP 888
G P PP
Sbjct: 269 GEHMPPPP 276
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSX-PPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PPP PP + P P P P + P PPP
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Query: 865 GRXPPAPP 888
G P PP
Sbjct: 282 GEHMPPPP 289
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSX-PPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PPP PP + P P P P + P PPP
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Query: 865 GRXPPAPP 888
G P PP
Sbjct: 295 GEHMPPPP 302
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSX-PPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PPP PP + P P P P + P PPP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Query: 865 GRXPPAPP 888
G P PP
Sbjct: 308 GEHMPPPP 315
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSX-PPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PPP PP + P P P P + P PPP
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 865 GRXPPAPP 888
G P PP
Sbjct: 321 GEHMPPPP 328
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/68 (25%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPPXXPXLPSX-PPAPXQXGXXLFFXPXXKXTPPPRXRGX 864
PPP PP + P P P P + P PPP
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Query: 865 GRXPPAPP 888
G P PP
Sbjct: 334 GEHMPPPP 341
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 792 RGGGXRGKXGXXGGGAGVXXGXGCGGSXRSXGXGGXXSXXR 670
RGG G G GG G G GG R GG R
Sbjct: 147 RGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 792 RGGGXRGKXGXXGGGAGVXXGXGCGGSXRSXGXGGXXSXXR 670
RGG G+ G GG G G G GG R GG R
Sbjct: 140 RGGFRGGRGGSRGGFGGNSRG-GFGGGSRGGFGGGSRGGSR 179
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 688 PPPPXASXXPPTXPPXXNPSPPP 756
PPPP S T P PS PP
Sbjct: 419 PPPPPISSSSTTPRPDDKPSLPP 441
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,535,758
Number of Sequences: 5004
Number of extensions: 18530
Number of successful extensions: 327
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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