Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D03
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    41   1e-05
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       27   0.19 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    27   0.19 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.25 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   1.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   1.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 22/64 (34%), Positives = 33/64 (51%)
 Frame = +3

Query: 333 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 512
           L ++  FS+F  K R  A  L  +F   ++ +     A YAR  +N  +F YA  +AI+ 
Sbjct: 74  LERDANFSLFIPKHRRIAGRLIDIFLGMRNVDDLLSVAVYARDRVNPYLFSYALSVAILH 133

Query: 513 RSDT 524
           R DT
Sbjct: 134 RQDT 137


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +1

Query: 376 GKKPSRCSSCS---IMPKILNVSTKQHATPEST*TRECSY 486
           G KP +C+ C    +   +LN   K H+       R+CSY
Sbjct: 255 GSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 294


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +1

Query: 376 GKKPSRCSSCS---IMPKILNVSTKQHATPEST*TRECSY 486
           G KP +C+ C    +   +LN   K H+       R+CSY
Sbjct: 13  GSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSY 52


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +3

Query: 363  YEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAII 509
            Y+K + + + + +  YYA  F     T+ +  ++   G FL  Y+I +I
Sbjct: 1203 YKKKKFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFL-GYFIGLI 1250


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 450 SMLFCRNIQNLWHNRTA*TARWLLPS 373
           S  FC N+Q  + N+ + T  W LP+
Sbjct: 205 SYQFCDNLQYSFDNQCSGTIDWALPN 230


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 450 SMLFCRNIQNLWHNRTA*TARWLLP 376
           S  FC N+Q  + N+ + T  W LP
Sbjct: 196 SYQFCDNLQYSFDNQCSGTIDWALP 220


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 619 HHLNVVHFIFNFHV 578
           HH++  H + N HV
Sbjct: 328 HHIHAQHHVVNHHV 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,783
Number of Sequences: 336
Number of extensions: 3337
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)