Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_D01
         (1432 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600...    30   3.9  
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    30   5.1  
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999...    29   6.8  
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425...    29   9.0  

>01_06_0090 +
           26358051-26359157,26359582-26359701,26359968-26360099,
           26360194-26360375,26360488-26360602,26362001-26362135,
           26362261-26362395
          Length = 641

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 17/48 (35%), Positives = 18/48 (37%)
 Frame = +1

Query: 580 AXXALXPXPXRXQGPPXPPP*EXXPPAXXXSXSXXAXXXXPRPXXXXP 723
           A  A  P     +GPP PPP    PPA   S S  A      P    P
Sbjct: 189 ASSAANPASLVQRGPPIPPPPPPVPPAAFKSKSYSASSRVSLPSTSAP 236


>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
 Frame = +1

Query: 574 PXAXXALXPXPXRXQGPPXPPP*EXXPPAXXXSXS------XXAXXXXPRPXXXXPXXP 732
           P A  A+ P P     PP PPP    PPA   + S        +    PRP    P  P
Sbjct: 66  PPAGIAVHPSPPPPPPPPPPPPPVPVPPAYSVTSSVPPYSMTSSLPPSPRPPPPLPFSP 124


>06_01_1169 +
           9996068-9996265,9996356-9998589,9998675-9998926,
           9999007-9999117,9999207-9999288,9999563-9999754
          Length = 1022

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
 Frame = +1

Query: 598 PXPXRXQGPPXPPP*EXXP--PAXXXSXSXXAXXXXPRPXXXXPXXPXXXXXXXXPXP 765
           P P   + PP PPP    P  P    S S       P+P    P  P        P P
Sbjct: 574 PEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPP 631


>12_02_0756 +
           22839673-22839870,22839961-22842194,22842280-22842531,
           22842612-22842722,22842812-22842893,22843168-22843359
          Length = 1022

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
 Frame = +1

Query: 598 PXPXRXQGPPXPPP*EXXP--PAXXXSXSXXAXXXXPRPXXXXPXXP 732
           P P   Q PP PPP    P  P    S S       P+P    P  P
Sbjct: 574 PEPPSPQHPPSPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTSP 620


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,316,930
Number of Sequences: 37544
Number of extensions: 126816
Number of successful extensions: 869
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4536424228
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)