Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C24
(944 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 43 3e-04
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 41 0.001
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 40 0.003
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 40 0.003
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 40 0.003
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 39 0.005
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 38 0.009
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 35 0.083
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 34 0.19
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.25
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 33 0.34
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 33 0.34
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.78
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4) 31 1.0
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 31 1.0
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 31 1.4
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 31 1.4
SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_59295| Best HMM Match : SET (HMM E-Value=0) 30 2.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 30 2.4
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 3.1
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 30 3.1
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.1
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 29 5.5
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 29 5.5
SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041) 29 5.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 24 6.0
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 7.2
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_44923| Best HMM Match : Fibrillarin (HMM E-Value=0) 28 9.6
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/92 (31%), Positives = 31/92 (33%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPPP + PP+ PPP PP Y P PP A PP
Sbjct: 95 PPPPYPPYPPPPPY----PPPPNPP----YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNA 146
Query: 849 XXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 147 PYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPP 178
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = +3
Query: 669 PPPPXXXFFXXP--PHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXX 842
PPPP + P P+ PP PP Y P PPP PPP
Sbjct: 109 PPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAP-YPPPPNPPYPPPLYPPPPNP 167
Query: 843 XXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP P P PPPP
Sbjct: 168 PPPNAPYPPPPYPPP--PNPPYPPPPNPPYPPPP 199
Score = 38.3 bits (85), Expect = 0.009
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +3
Query: 702 PPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPP-XXXXXXXXXXXPPX 878
PP PP PP + Y P PP PPP PP
Sbjct: 84 PPTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPS 143
Query: 879 PPXXLPPPRXXXXXXXAXPPPP 944
P PPP PPPP
Sbjct: 144 PNAPYPPPPNPPYPPPLYPPPP 165
Score = 37.9 bits (84), Expect = 0.012
Identities = 26/92 (28%), Positives = 28/92 (30%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPPP + PP P P P + P PPP PPP
Sbjct: 125 PPPPNPPY--PPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPP 182
Query: 849 XXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP P PP
Sbjct: 183 PNPPYPPPPNPPYP-PPPNAPNPPPPNPPYPP 213
Score = 37.1 bits (82), Expect = 0.021
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKP-PPXPPXFFXYSXXXGXPXXX-PPPLSXXGXXXASPPPXX 842
PPPP + P P PP PP + P PPP PPP
Sbjct: 133 PPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPN 192
Query: 843 XXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
P PP P P PPPP
Sbjct: 193 PPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
Score = 35.9 bits (79), Expect = 0.048
Identities = 39/157 (24%), Positives = 42/157 (26%), Gaps = 1/157 (0%)
Frame = +3
Query: 477 PPPXPXXPLXPPXXXGXXFFXXPXXPGKXXFXTGHPPPXXXXXXXXXXXXXXXXXXXXXX 656
PPP P P PP + P P +PPP
Sbjct: 96 PPPYPPYPPPPP------YPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPN---- 145
Query: 657 FXSXPPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPP 836
PPPP + PP Y PP PP Y P PP PP
Sbjct: 146 -APYPPPPNPPY--PPPLY--PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPN 200
Query: 837 XXXXXXXXXXXPPXPPXXLPP-PRXXXXXXXAXPPPP 944
PP P PP P PPPP
Sbjct: 201 APNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPPP 237
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 790 PPXFPEXAXXXPPPPPRGPXXXLXXXXPXXPPLXFPHPAXSXLXXXRXPPP 942
PP +P P PPP P P PP P+P PPP
Sbjct: 176 PPPYPPPPNP-PYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPP 225
Score = 28.7 bits (61), Expect = 7.2
Identities = 30/131 (22%), Positives = 36/131 (27%), Gaps = 6/131 (4%)
Frame = +3
Query: 462 PFSXXP-PPXPXXPLXP-PXXXGXXFFXXPXXPGKXXFXTGHPPPXXXXXXXXXXXXXXX 635
P+ P PP P P P P + P P +PPP
Sbjct: 107 PYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPN 166
Query: 636 XXXXXXXFXSXP-PPPXXXFFXXPPHYLXXKPPPXP---PXFFXYSXXXGXPXXXPPPLS 803
+ P PPP + PP+ PP P P Y P PP
Sbjct: 167 PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
Query: 804 XXGXXXASPPP 836
PPP
Sbjct: 227 NAPNPPYPPPP 237
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/84 (32%), Positives = 31/84 (36%)
Frame = +3
Query: 693 FXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXP 872
F PH++ PPP PP S P PPP + A+PPP P
Sbjct: 39 FTYYPHFISSSPPPPPP-----SPPAAAPAAPPPPAAAP----AAPPPPAAPPAAP---P 86
Query: 873 PXPPXXLPPPRXXXXXXXAXPPPP 944
P PP PPP P PP
Sbjct: 87 PPPPLPAPPPPPAQPAPQPPPAPP 110
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXY 758
PPPP PP +PPP PP F +
Sbjct: 86 PPPPPLPAPPPPPAQPAPQPPPAPPHFLPF 115
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPP 797
PPPP PP PP PP P PPP
Sbjct: 65 PPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPP 107
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 43.2 bits (97), Expect = 3e-04
Identities = 29/96 (30%), Positives = 31/96 (32%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG GGG GG G GGG + GG G
Sbjct: 785 GGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYAD 844
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGGXXKN 656
+ GG GGG GG GGGG KN
Sbjct: 845 GDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVIKN 880
Score = 37.9 bits (84), Expect = 0.012
Identities = 27/91 (29%), Positives = 27/91 (29%)
Frame = -2
Query: 940 GGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXXX 761
GGG GGG GG GG GGG GGG G
Sbjct: 779 GGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGD 838
Query: 760 EXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
G GGG GG GGGG
Sbjct: 839 GGGYADGDGGGGGGGGGGGGGGGGGGGGGGG 869
Score = 37.1 bits (82), Expect = 0.021
Identities = 27/92 (29%), Positives = 27/92 (29%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG GGG GG G GGG G G G
Sbjct: 780 GGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDG 839
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
GG GGG GG GGGG
Sbjct: 840 GGYADGDGGGGGGGGGGGGGGGGGGGGGGGGG 871
Score = 35.9 bits (79), Expect = 0.048
Identities = 26/92 (28%), Positives = 26/92 (28%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GG G GGG G GG GGG G G G
Sbjct: 782 GGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGG 841
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
GG GGG GG GGGG
Sbjct: 842 YADGDGGGGGGGGGGGGGGGGGGGGGGGGGGG 873
Score = 32.3 bits (70), Expect = 0.59
Identities = 28/93 (30%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG GG GG GG GGG GGG G
Sbjct: 770 GGGGGDGGDGGGGGDGGGGGGGGGG--GGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDG 827
Query: 763 XEXXKXXG-GXGGGLXXR*WGGXXKXXXXGGGG 668
G G GGG GG GGGG
Sbjct: 828 GGYGDGGGFGDGGGYADGDGGGGGGGGGGGGGG 860
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/99 (31%), Positives = 34/99 (34%), Gaps = 5/99 (5%)
Frame = +3
Query: 663 SXPPPPXXXFFXXPPHYLXXKP----PPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASP 830
S PPPP PP P PP PP + G P PPP++ A
Sbjct: 125 SPPPPPTSPATRAPPPPPPIAPATGGPPPPPPI---APATGGPPP-PPPIAPAATVPAPA 180
Query: 831 PPXXXXXXXXXXX-PPXPPXXLPPPRXXXXXXXAXPPPP 944
P PP PP PPP A PPPP
Sbjct: 181 VPLAAASPPPPSGGPPPPPPPPPPPPPPPILELAAPPPP 219
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +3
Query: 726 PPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPR 905
P P PP + P PPP S PPP PP P PP
Sbjct: 108 PTPPPPPRAPETPSQA-PSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPP 166
Query: 906 XXXXXXXAXPPPP 944
A P P
Sbjct: 167 PPPIAPAATVPAP 179
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Frame = +1
Query: 793 PXFPEXAXXXPPPPPRGPXXXLXXXXPXXPP----LXFPHPAXSXLXXXRXPPP 942
P + PPPPPR P P PP P P PPP
Sbjct: 100 PMVAQSVAPTPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPP 153
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 39.9 bits (89), Expect = 0.003
Identities = 41/161 (25%), Positives = 42/161 (26%), Gaps = 5/161 (3%)
Frame = +3
Query: 477 PPPXPXXPLXPPXXXGXXFFXXPXXPGKXXFXTGHPPPXXXXXXXXXXXXXXXXXXXXXX 656
P P P PP G P P PPP
Sbjct: 241 PAPPPGENRPPPPMRGPTSGGEPPPPKNA------PPPPKRGSSNPPPPPTRGPPSNSFT 294
Query: 657 FXSXPPPPXXXFFXXPPHYLXXKPPPXPPXF----FXYSXXXGXPXXXPPPLSXXGXXXA 824
P PP PP L PPP PP G PPP+S
Sbjct: 295 TQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTR 354
Query: 825 S-PPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
S PPP PP PP PP PPPP
Sbjct: 355 SAPPPPPGRAPQPLGGPPPPPPGRRPP--SGKINPPPPPPP 393
Score = 34.3 bits (75), Expect = 0.15
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 4/96 (4%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPP----P 836
PPPP PP PP PP PPP A PP P
Sbjct: 195 PPPPHSRHGSAPPPPERSSGPPPPPP----GRGPSQRSLAPPPTGSSRPLPAPPPGENRP 250
Query: 837 XXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
P PP PPP + PPPP
Sbjct: 251 PPPMRGPTSGGEPPPPKNAPPP---PKRGSSNPPPP 283
Score = 31.9 bits (69), Expect = 0.78
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXK--PPPXP---PXFFXYSXXXGXPXXXPPPLSXXGXXXASPP 833
PPPP PP L + PPP P P S P P PL PP
Sbjct: 320 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGP----PPPP 375
Query: 834 PXXXXXXXXXXXPPXPPXXLPPP 902
P PP PP + P
Sbjct: 376 PGRRPPSGKINPPPPPPPAMDKP 398
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/92 (32%), Positives = 30/92 (32%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPPP L PPP PP S P PPP G PPP
Sbjct: 678 PPPPPLPVIEGSS--LSVPPPPPPPPPPLLSGTLPMPPPPPPP--PPGCAGLPPPPPSPQ 733
Query: 849 XXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 734 PGCAGLPPPPPP---PPP---GCAGLPPPPPP 759
Score = 36.7 bits (81), Expect = 0.027
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = +3
Query: 726 PPPXPP-XFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPP 902
PPP PP S P PPP PPP PP PP P P
Sbjct: 677 PPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPS--PQP 734
Query: 903 RXXXXXXXAXPPPP 944
PPPP
Sbjct: 735 GCAGLPPPPPPPPP 748
Score = 36.7 bits (81), Expect = 0.027
Identities = 25/78 (32%), Positives = 26/78 (33%)
Frame = +3
Query: 663 SXPPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXX 842
S PPPP L PPP PP G P PPP G PPP
Sbjct: 692 SVPPPPPPPPPPLLSGTLPMPPPPPPPP----PGCAGLPP--PPPSPQPGCAGLPPPPPP 745
Query: 843 XXXXXXXXXPPXPPXXLP 896
PP PP +P
Sbjct: 746 PPPGCAGLPPPPPPIDVP 763
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 790 PPXFPEXAXXXPPPPPRGPXXXLXXXXPXXPPLXFP 897
PP P+ PPPP P P PP+ P
Sbjct: 728 PPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPPIDVP 763
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 39.9 bits (89), Expect = 0.003
Identities = 41/161 (25%), Positives = 42/161 (26%), Gaps = 5/161 (3%)
Frame = +3
Query: 477 PPPXPXXPLXPPXXXGXXFFXXPXXPGKXXFXTGHPPPXXXXXXXXXXXXXXXXXXXXXX 656
P P P PP G P P PPP
Sbjct: 153 PAPPPGENRPPPPMRGPTSGGEPPPPKNA------PPPPKRGSSNPPPPPTRGPPSNSFT 206
Query: 657 FXSXPPPPXXXFFXXPPHYLXXKPPPXPPXF----FXYSXXXGXPXXXPPPLSXXGXXXA 824
P PP PP L PPP PP G PPP+S
Sbjct: 207 TQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTR 266
Query: 825 S-PPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
S PPP PP PP PP PPPP
Sbjct: 267 SAPPPPPGRAPQPLGGPPPPPPGRRPP--SGKINPPPPPPP 305
Score = 34.3 bits (75), Expect = 0.15
Identities = 27/96 (28%), Positives = 28/96 (29%), Gaps = 4/96 (4%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPP----P 836
PPPP PP PP PP PPP A PP P
Sbjct: 107 PPPPHSRHGSAPPPPERSSGPPPPPP----GRGPSQRSLAPPPTGSSRPLPAPPPGENRP 162
Query: 837 XXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
P PP PPP + PPPP
Sbjct: 163 PPPMRGPTSGGEPPPPKNAPPP---PKRGSSNPPPP 195
Score = 31.9 bits (69), Expect = 0.78
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXK--PPPXP---PXFFXYSXXXGXPXXXPPPLSXXGXXXASPP 833
PPPP PP L + PPP P P S P P PL PP
Sbjct: 232 PPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGP----PPPP 287
Query: 834 PXXXXXXXXXXXPPXPPXXLPPP 902
P PP PP + P
Sbjct: 288 PGRRPPSGKINPPPPPPPAMDKP 310
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 39.1 bits (87), Expect = 0.005
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 726 PPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPR 905
PPP PP P PPP PPP PP PP PPP
Sbjct: 366 PPPPPPP---------PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Query: 906 XXXXXXXAXPPPP 944
PPPP
Sbjct: 417 PPAPPPPPPPPPP 429
Score = 38.3 bits (85), Expect = 0.009
Identities = 24/73 (32%), Positives = 24/73 (32%)
Frame = +3
Query: 726 PPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPR 905
PPP PP P PPP S PPP PP PP PPP
Sbjct: 367 PPPPPPP----PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP---PPPPPPPPPPPA 419
Query: 906 XXXXXXXAXPPPP 944
PPPP
Sbjct: 420 PPPPPPPPPPPPP 432
Score = 37.5 bits (83), Expect = 0.016
Identities = 28/93 (30%), Positives = 28/93 (30%)
Frame = +3
Query: 663 SXPPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXX 842
S PPPP PP PPP PP P PPP PPP
Sbjct: 364 SPPPPPPPP----PPPPSPPPPPPPPP-----------PSPPPPPQPPPPPPPPPPPPPP 408
Query: 843 XXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPP 941
P PP PPP A PP
Sbjct: 409 PPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
Score = 37.5 bits (83), Expect = 0.016
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 789 PPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PPP SPPP PP PP PPP PPPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 33.9 bits (74), Expect = 0.19
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 777 PXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
P PPP PPP PP PP PPP PP P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 825 SPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
SPPP PP PP PPP PPPP
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPP--PPPSPPPPPQPPPPPPP 401
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 810 GXXXASPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
G + PPP PP PP PP PPPP
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 790 PPXFPEXAXXXPPPPPRGPXXXLXXXXPXXPPLXFPHPAXSXLXXXRXPPP 942
PP P PPPPP P P PP P P PP
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 38.3 bits (85), Expect = 0.009
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPP PP + PPP PP S P PP G +PPP
Sbjct: 307 PPPSRGSAPPPPPARMGTAPPPPPPS--RSSQRPPPPSRGAPPPPSMG---MAPPPVGGA 361
Query: 849 XXXXXXXPP--XPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PP PPPP
Sbjct: 362 APPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPP 395
Score = 37.9 bits (84), Expect = 0.012
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPPP PP PPP P G PPP G PPP
Sbjct: 327 PPPPPSRSSQRPPPPSRGAPPP--PSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGR 384
Query: 849 XXXXXXXPPXPP---XXLPPP 902
PP PP PPP
Sbjct: 385 PPSSLGNPPPPPPPGRGAPPP 405
Score = 32.3 bits (70), Expect = 0.59
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPPP PP PPP P PPP PPP
Sbjct: 287 PPPPPSRGAAPPPPSRG-APPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPP---- 341
Query: 849 XXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP P + PP PPPP
Sbjct: 342 ---SRGAPPPPSMGMAPPPVGGAAPPPPPPPP 370
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/92 (26%), Positives = 25/92 (27%)
Frame = +3
Query: 468 SXXPPPXPXXPLXPPXXXGXXFFXXPXXPGKXXFXTGHPPPXXXXXXXXXXXXXXXXXXX 647
S PPP PP P P + G PPP
Sbjct: 313 SAPPPPPARMGTAPPPPPPSRSSQRPPPPSR-----GAPPPPSMGMAPPPVGGAAPPPPP 367
Query: 648 XXXFXSXPPPPXXXFFXXPPHYLXXKPPPXPP 743
PPPP PP L PPP PP
Sbjct: 368 PPPVGGPPPPPPP-IEGRPPSSLGNPPPPPPP 398
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 35.9 bits (79), Expect = 0.048
Identities = 28/103 (27%), Positives = 30/103 (29%), Gaps = 11/103 (10%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXP--------PXFFXYSXXXGXPXXXPPPLS-XXGXXX 821
PPPP PP + P P P P PPP S G
Sbjct: 339 PPPPVPSATSAPPPWATSNSGPKPLMSTPVQRPPGMRPPGAGNGPGGPPPPWSKPGGILP 398
Query: 822 ASPPPXXXXXXXXXXXPP--XPPXXLPPPRXXXXXXXAXPPPP 944
PPP PP P +PPP PPPP
Sbjct: 399 GPPPPGPPMLNMAPSIPPWQTTPGYIPPPPPGFPQFQPPPPPP 441
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 35.1 bits (77), Expect = 0.083
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 5/83 (6%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPP-----PLSXXGXXXASPP 833
PPP P + PP PP F S P PP P S A+PP
Sbjct: 381 PPPSVFASSSGVPTPVAAPPPAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTPVAAPP 440
Query: 834 PXXXXXXXXXXXPPXPPXXLPPP 902
P P P PPP
Sbjct: 441 PSVFASSSGVPTPVTAPPPAPPP 463
Score = 31.9 bits (69), Expect = 0.78
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPP-----PLSXXGXXXASPP 833
PPP P + PP PP F S P PP P S A+PP
Sbjct: 439 PPPSVFASSSGVPTPVTAPPPAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTPVAAPP 498
Query: 834 PXXXXXXXXXXXPPXPPXXLPPP 902
P P PPP
Sbjct: 499 PSVFAPSSGVPTTVTAPPAAPPP 521
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPP 836
PPP P + PP PP F S P PPP++ ++PPP
Sbjct: 541 PPPSVFAPSSGVPTPVTAPPPAPPPSVFAPSSAVPTPATAPPPVA---ATLSAPPP 593
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPP P + P PP F S P PPP +PPP
Sbjct: 497 PPPSVFAPSSGVPTTVTAPPAAPPPSVFAPSSGVPTPVTEPPP---------APPPSVFA 547
Query: 849 XXXXXXXPPXPPXXLPPP 902
P P PPP
Sbjct: 548 PSSGVPTPVTAPPPAPPP 565
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.7 bits (76), Expect = 0.11
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Frame = +3
Query: 669 PPPPXXXF--FXXPPHYLXXK--PPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPP 836
PPPP PPH + PP PP G PPP+ PPP
Sbjct: 428 PPPPQHTGPPQPRPPHGMPQGGGPPQLPPNL--PPPPGGMRGMPPPPMGMYPPPRGFPPP 485
Query: 837 XXXXXXXXXXXPPXPPXXLPPPR 905
PP P PPPR
Sbjct: 486 PFGPPPPFYRGPPPPRGMPPPPR 508
Score = 33.1 bits (72), Expect = 0.34
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +3
Query: 702 PPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXX-GXXXASPPPXXXXXXXXXXXPPX 878
PP P P PP G P PP L G PPP PP
Sbjct: 429 PPPQHTGPPQPRPPHGMPQG---GGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPP 485
Query: 879 PPXXLPPPRXXXXXXXAXPPPP 944
P PP PPPP
Sbjct: 486 PFGPPPPFYRGPPPPRGMPPPP 507
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 34.7 bits (76), Expect = 0.11
Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = +3
Query: 672 PPPXXXFFXXPPHYLXXKPPPXPPXFFXY-SXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPP F PP + PP P F + P PPP + PPP
Sbjct: 353 PPPNLLFSFPPPPIIPIPPPAMPAMFNPHVPPPMIGPVTVPPPPLIPPPQASIPPPTMIQ 412
Query: 849 XXXXXXXPPXPPXXLP 896
PP PP +P
Sbjct: 413 TLPPPSVPP-PPIGVP 427
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 34.3 bits (75), Expect = 0.15
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPPP PP P PP P PPP PP
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPP-----PGGNAPPPPPPPGGSAPPPGGGAPPLPPP 976
Query: 849 XXXXXXXPPXPPXXLPPP 902
PP PP PPP
Sbjct: 977 PGGSAPPPPPPPPPPPPP 994
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 34.3 bits (75), Expect = 0.15
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = -2
Query: 901 GGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXXXEXXKXXGGXGGGL 722
GGG GG GG GGG E GGG G GG GGG+
Sbjct: 1759 GGGGGGGGMGGGGGMAGGGGGMGGG-GMAAGGGEFGGGEGMGGGGMAGGGGGMGGGGGGM 1817
Query: 721 XXR*WGGXXKXXXXGGGG 668
GG + GGG
Sbjct: 1818 -----GGGGEGMGAAGGG 1830
Score = 33.5 bits (73), Expect = 0.25
Identities = 27/92 (29%), Positives = 29/92 (31%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG GGG GG GG GG GGG G
Sbjct: 1761 GGGGGGMGGGGGMAGGG---GGMGGGGMAAGGGEFGGGEGMGGGGMAGGGGGMGGGGGGM 1817
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
+ G GGG+ GG GGGG
Sbjct: 1818 GGGGEGMGAAGGGMGA---GGEGGGAGGGGGG 1846
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 944 GGGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXGG 789
GGGG G GG G G GGGGG G GG
Sbjct: 1769 GGGGMAGGGGGMGGGGMAAGGGEFGGGEGMGGGGMAGGGGGMGGGGGGMGGG 1820
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -1
Query: 944 GGGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGGGGGXXXA 810
GGGG G G+ G G G GGGGG A
Sbjct: 1805 GGGGGMGGGGGGMGGGGEGMGAAGGGMGAGGEGGGAGGGGGGYSA 1849
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 33.9 bits (74), Expect = 0.19
Identities = 27/92 (29%), Positives = 27/92 (29%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG RGGG GG GG GGG G
Sbjct: 123 GGGGRRGGGYGGGRGGGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGG-GY 181
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
GG GGG GG GGGG
Sbjct: 182 GGGGHGGGGYGGGGYGGGGGGYGGSGYGGGGG 213
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/92 (28%), Positives = 26/92 (28%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG GGG GG G GGG GG G
Sbjct: 137 GGGGGYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGY 196
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
GG G G GG GGGG
Sbjct: 197 GGGGGGYGGSGYGGGGGYGGGGYGGGRSGGGG 228
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.19
Identities = 24/77 (31%), Positives = 24/77 (31%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
PPPP PP PPP PP P PPP PPP
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPT--NKPPPPPPPTNGPPPPPPPTNGPPPPPP---- 399
Query: 849 XXXXXXXPPXPPXXLPP 899
PP PP PP
Sbjct: 400 -PTNGPPPPPPPTNGPP 415
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 789 PPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PPP + SPPP PP PP PPP PPPP
Sbjct: 348 PPPTNNP----PSPPPPTNNTP-----PPPPPTNKPPPPPPPTNGPPPPPPP 390
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +3
Query: 777 PXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
P PPP + +PPP PP PP PPP PPPP
Sbjct: 354 PPSPPPPTNN------TPPPPPPTNKPP---PPPPPTNGPPPPPPPTNGPPPPPPP 400
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.5 bits (73), Expect = 0.25
Identities = 28/95 (29%), Positives = 28/95 (29%), Gaps = 3/95 (3%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG GGG GG GG GGG GGG G
Sbjct: 242 GGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGG 301
Query: 763 XEXXKXXG-GXGGGLXXR*WG--GXXKXXXXGGGG 668
G GGG G G GGGG
Sbjct: 302 ATGGGGGATGVGGGATGGGGGATGGGVGATGGGGG 336
Score = 33.1 bits (72), Expect = 0.34
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG GGG GG GG GGG GGG G
Sbjct: 284 GGGGATGGGGGATGGGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGG 343
Query: 763 XEXXKXXGGXGGG 725
GGG
Sbjct: 344 VTGGGGGATGGGG 356
Score = 28.7 bits (61), Expect = 7.2
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GG + GGG GG GG GGG GGG G
Sbjct: 228 GGSRLSNDRSNGRLGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGGGGGATGG-GG 286
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXG--GGG 668
G GGG GG G GGG
Sbjct: 287 GATGGGGGATGGGGGATGGGGGATGVGGGATGGG 320
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 33.5 bits (73), Expect = 0.25
Identities = 22/58 (37%), Positives = 22/58 (37%)
Frame = +3
Query: 771 GXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
G P PPP G A PPP PP PP PPP A PPPP
Sbjct: 288 GAPVPPPPPAD--GSAPAPPPP-----PPPGGAPPPPP---PPPPPPPGDGGAPPPPP 335
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 790 PPXFPEXAXXXPPPPPRGPXXXLXXXXPXXPP 885
PP P A PPPPP P P PP
Sbjct: 306 PPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 33.1 bits (72), Expect = 0.34
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = +3
Query: 702 PPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXP 881
PP P PP F P PPP+ PPP PP P
Sbjct: 156 PPISPIDPPRTQPPPIFPIDP----PRTQPPPIPPIDPPRTQPPPIPPIDPPRTQPPPIP 211
Query: 882 PXXLPPPRXXXXXXXAXPPPP 944
P + PPR P P
Sbjct: 212 P--IDPPRTQPPPIFPQPTTP 230
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 33.1 bits (72), Expect = 0.34
Identities = 25/95 (26%), Positives = 28/95 (29%), Gaps = 4/95 (4%)
Frame = +3
Query: 672 PPPXXXFFXXPPHYLXXKP--PPXPPXFFX-YSXXXGXPXXXPP-PLSXXGXXXASPPPX 839
PP + PP Y P PP PP + P PP P+ PP
Sbjct: 279 PPSLIRYPTLPPRYPPSPPRYPPSPPRYPPSLHRYPQSPLRYPPSPIRYPPLPSRYPPSP 338
Query: 840 XXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP P P PP P
Sbjct: 339 PRYPSSHPRYPPSPPRYPPSPPRYPSSHPRYPPSP 373
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 790 PPXFPEXAXXXPPPPPRGPXXXLXXXXPXXPPLXFPHPAXSXLXXXRXPP 939
PP +P PP PPR P + P PP P P R PP
Sbjct: 261 PPRYPPSPLRYPPIPPRYPPSLI--RYPTLPPRYPPSPPRYPPSPPRYPP 308
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 31.9 bits (69), Expect = 0.78
Identities = 24/94 (25%), Positives = 25/94 (26%)
Frame = +3
Query: 663 SXPPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXX 842
S P P P P PP + P PP PPP
Sbjct: 1199 SNPNRPPTTAIPPPMTNTMTHSAPRPPPMGHHMMNMPPPPPAMPPDGPPKFMGLPPPPPG 1258
Query: 843 XXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPPR P PP
Sbjct: 1259 MRPM-----PPQPPFMPPPPRMQPPGPPGPPGPP 1287
>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
Length = 186
Score = 31.5 bits (68), Expect = 1.0
Identities = 27/92 (29%), Positives = 27/92 (29%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG A GGG G GG GGG A GGG
Sbjct: 70 GGGGGATGGHGGATGGGGGATGDGGGATGGGGGATGGGGGATGGHGGATGGGVGATGGHG 129
Query: 763 XEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
G GG GG GGGG
Sbjct: 130 GATGGHGGATGGHGGATGGGG---GATGGGGG 158
Score = 31.1 bits (67), Expect = 1.4
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
GGGG A GGG GG GG GGG GGG G
Sbjct: 51 GGGGGATGGGATG-GGGGATGGGGGATGGHGGATGGGGGATGDGGGATGGGGGATGG-GG 108
Query: 763 XEXXKXXGGXGGGL 722
G GGG+
Sbjct: 109 GATGGHGGATGGGV 122
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +3
Query: 705 PHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPP 884
P Y P P P S P PP S G A PPP P P
Sbjct: 564 PSYGAQYPAPPPDGSPYSSMVYAPPAGVQPPQSGSGAPPAMPPPVGAPGGQPSYSHPMPQ 623
Query: 885 XXLPPPRXXXXXXXAXPPPP 944
P + PPP
Sbjct: 624 GYAPQGYQPEYGGQSMQPPP 643
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 31.1 bits (67), Expect = 1.4
Identities = 23/81 (28%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPX----PPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPP 836
PPPP PP + PP PP Y PP++ +PPP
Sbjct: 245 PPPPPV-----PPPTIPSVPPGSETYVPPGSATYESMDSVNKAPVPPMTPPPAVVTAPPP 299
Query: 837 XXXXXXXXXXXPPXPPXXLPP 899
PP PP LPP
Sbjct: 300 APPLPNFTSPSPPPPP-PLPP 319
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +3
Query: 777 PXXXPPPLSXXGXXXAS---PPPXXXXXXXXXXXPPXPPXXLPPP 902
P PPP + G +S PPP PP P LPPP
Sbjct: 281 PPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPP 325
>SB_23149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
G GG A GGG G GG A GGG G
Sbjct: 331 GSGGIASSTIGACAGGGGSSNCQAGNGGNSCQRGGQSGGAAGTASMGGGGGGLQFGNQDY 390
Query: 763 XEXXKXXGGXGGG 725
GG GGG
Sbjct: 391 TSRLSYGGGGGGG 403
>SB_59295| Best HMM Match : SET (HMM E-Value=0)
Length = 1230
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/84 (26%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Frame = +3
Query: 702 PPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPP-- 875
PP Y+ K PP + G PPP G PPP PP
Sbjct: 84 PPKYITGKGMVQPPPKYR----TGKGIVQPPPKYRTGKGMVQPPPKYRTGKGMVRPPPKY 139
Query: 876 --XPPXXLPPPRXXXXXXXAXPPP 941
PPP+ PPP
Sbjct: 140 RTGKGMVQPPPKYRTGKGMVQPPP 163
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/84 (26%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
Frame = +3
Query: 702 PPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPP-- 875
PP Y K PP + G PPP G PPP PP
Sbjct: 123 PPKYRTGKGMVRPPPKYR----TGKGMVQPPPKYRTGKGMVQPPPKYRTGKGMVQPPPKY 178
Query: 876 --XPPXXLPPPRXXXXXXXAXPPP 941
PPP+ PPP
Sbjct: 179 RTGKGMVQPPPKYRTGKGMVQPPP 202
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXF--FXYSXXXGXPXXXPPPLSXXGXXXASPPP 836
PPPP PP PPP PP S G P P S PPP
Sbjct: 687 PPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPPPP 744
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP + PPPP
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPPPP 709
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 686 PPPPPPPPPPPPPPPPQPSTPPPPP 710
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 687 PPPPPPPPPPPPPPPQPSTPPPPPP 711
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 30.3 bits (65), Expect = 2.4
Identities = 24/79 (30%), Positives = 25/79 (31%)
Frame = -2
Query: 904 RGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXXXEXXKXXGGXGGG 725
R GG GG GG GG GGG GG GGG
Sbjct: 120 RRGGVQRGGRGGWRGRGGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGG 179
Query: 724 LXXR*WGGXXKXXXXGGGG 668
R GG + GGGG
Sbjct: 180 GRGRGTGGGSR----GGGG 194
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXX-GGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXG 776
GGG RGGG GG GG GGGE GGG G
Sbjct: 136 GGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGRGTGGGSRGG 192
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -1
Query: 944 GGGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXG 792
GG R AG G GG G G RGG GG G G
Sbjct: 130 GGWRGRGGGEGNGAGGGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEGGGG 180
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -1
Query: 944 GGGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXGG 789
GGG G+G GG G G RGGGG G GG
Sbjct: 180 GGGSQGGGYRSGGGGYGGSKGGYGGGSGGGGYGGGRGGGGYGGGHGGGGYGG 231
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -2
Query: 832 GGEAXXXPXXEXGGGXXXGXPXXXEXXKXXGGXGGGLXXR*WGGXXKXXXXGGGG 668
GG GGG G GG GGG +GG GGGG
Sbjct: 179 GGGGSQGGGYRSGGGGYGGSKGGYGGGSGGGGYGGGRGGGGYGGGHGGGGYGGGG 233
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXG 776
GGGG GGG GG GG GGG + GGG G
Sbjct: 191 GGGGYGGSKGGY--GGGSGGGGYGGGRGGGGYGGGHGGGGYGGGGRHDYGGGSKGG 244
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 902 GWGKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXGG 789
G G G G GPRGGGGG G GG
Sbjct: 188 GRGGRGGRGGGRGAPRGRGGPRGGGGGSGGYGGGSYGG 225
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 771 GXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
G P PPP G +PPP PP P PPP PPPP
Sbjct: 659 GPPPPPPPP--PGGQAGGAPPP---------PPPPLPGGAAPPPPPPIGGGAPPPPPP 705
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXX 764
G GG RGGG GG GG GGG G
Sbjct: 719 GRGGWQKDYQRGGRGGGGYGGGYNDRRMQQGGYGNRSGGGYRGGGGYGGGGGGYRGGGGY 778
Query: 763 XEXXKXXGGXGGG 725
+ GG GGG
Sbjct: 779 GGGHRGGGGYGGG 791
>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
Length = 765
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -1
Query: 944 GGGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXGG 789
GGGG G G GG G G GGG G A +G G
Sbjct: 663 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAGAGDDDG 714
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 941 GGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSG 801
GGG G G GG G G GGGGG A +G
Sbjct: 662 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAG 708
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEA 821
GGGG GGG GG GG GGG A
Sbjct: 662 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA 702
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGG 788
GGGG GGG GG GG G G A + G G
Sbjct: 665 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAGAGDDDGDG 716
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/97 (25%), Positives = 26/97 (26%), Gaps = 3/97 (3%)
Frame = +3
Query: 663 SXPPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPP-PLSXX--GXXXASPP 833
S P P PH P PP P PP P ASPP
Sbjct: 977 SMPVPASRQSKAPIPHPSPPMQPAKPPRQHTQCSIDPVPHLKPPGPTEQPVPPKRKASPP 1036
Query: 834 PXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
PP +PPPR PPP
Sbjct: 1037 SAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPP 1073
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 825 SPPPXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
SPPP P P PPPR + P PP
Sbjct: 1048 SPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPP 1087
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 790 PPXFPEXAXXXPPPPPRGPXXXLXXXXPXXPPLXFPHPAXSXLXXXRXPPP 942
PP P PPPPP P P PP P P + L PPP
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSP-PRPLAAKLP---EPPP 250
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 723 KPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPP 902
+PPP PP P PPP S PPP P PP PP
Sbjct: 203 QPPPPPPR------PPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPP 256
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 790 PPXFPEXAXXXPPPPPRGPXXXLXXXXPXXPPL 888
PP P PPPPP P L P PP+
Sbjct: 220 PPPSPSPPRP-PPPPPPSPPRPLAAKLPEPPPI 251
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 208 PPRPPPSPPPPPPPPSPSPPRPPPP 232
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGG 791
G GG + RGGG GG GG GGG + GG
Sbjct: 102 GYGGSSRGGYGGGRGGGGYGGGRGGGGYGGGRGGGYGGGRRDYGGGSKGGG 152
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = -1
Query: 941 GGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGG--GGGXXXAXSGKXGG 789
GGG G G+ GG G G RGG GGG G GG
Sbjct: 99 GGGGYGGSSRGGYGGGRGGGGYGGGRGGGGYGGGRGGGYGGGRRDYGGGSKGG 151
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -1
Query: 944 GGGGXRXXXXXXXAGW--GKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXGG 789
GGGG + G G GG G G RGGGGG GG
Sbjct: 183 GGGGSQGGGYRSGGGGYGGSSRGGYGGGRGGGGYGGGRGGGGGYGGGRRDYGGG 236
>SB_58757| Best HMM Match : GRP (HMM E-Value=0.0041)
Length = 154
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = -2
Query: 901 GGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXXXEXXKXXGGXGGGL 722
GGG GG GG GGG + GGG G + GG GGG+
Sbjct: 62 GGGGGGGGGGGGGG--------GGGGGGGGDDGDGGGGDGGGGGGGGDGGGGGGGGGGGV 113
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 944 GGGGXRXXXXXXXAGWGKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXGG 789
GGGG G G GG G G GGGGG G GG
Sbjct: 62 GGGGGGGGGGGGGGGGGGGGGGDDGDGGGGDGGG--GGGGGDGGGGGGGGGG 111
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 5.5
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Frame = +3
Query: 672 PPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXX 851
PPP PP L PPP PP P P + +PPP
Sbjct: 908 PPPPLPLAPEPPPPL---PPPPPPI------QTTRPTVPTTPTTQASTTRPTPPPPTSAL 958
Query: 852 XXXXXX---PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP P LPPP A PP
Sbjct: 959 PPPIPATQVPPPPLPPLPPPPPPVQTTTAPTLPP 992
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = +3
Query: 477 PPPX--PXXPLXPPXXXGXXFFXXPXXPGKXXFXTGHPPP 590
PPP P P PP G F P P G P P
Sbjct: 32 PPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGP 71
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 24/100 (24%), Positives = 28/100 (28%), Gaps = 8/100 (8%)
Frame = +3
Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXX----ASPP- 833
P PP PP PP P + G P PP + G +P
Sbjct: 112 PGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGNPAG 171
Query: 834 ---PXXXXXXXXXXXPPXPPXXLPPPRXXXXXXXAXPPPP 944
P PP PP + PP PP P
Sbjct: 172 IQGPNGLPGPNGPLGPPGPPGDMGPPGLPGPQGPQMPPGP 211
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 823 PPPPPRGPXXXLXXXXPXXPPLXFPHP 903
PPPPP P P PP FP P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPP 491
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFPPPP 492
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 470 PPPPPPPPPPPPPPPPPPFPPPPPP 494
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPPPPPPP 1182
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 870 PPXPPXXLPPPRXXXXXXXAXPPPP 944
PP PP PPP PPPP
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPP 1181
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +3
Query: 723 KPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXXXXXXXXXPPXPPXXLPPP 902
+PPP PP PPP G A+PPP PP PP L P
Sbjct: 279 QPPPPPPL---------TGGMLPPPFG--GHPAAAPPPPPLPAGVPAPPPPPPPPMLGGP 327
Query: 903 R 905
+
Sbjct: 328 K 328
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -2
Query: 943 GGGGXAXXXXXXXRGGGXXXGGXGGXXXXXXXXXXXGGGEAXXXPXXEXGGG 788
GGGG RGGG GG GG GGG GGG
Sbjct: 92 GGGGRRERGG---RGGGGGYGGGGGYGGGGRSYGGGGGGGGFYQDSYGGGGG 140
>SB_44923| Best HMM Match : Fibrillarin (HMM E-Value=0)
Length = 304
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 896 GKXXGGXXGXXXXXXXXGPRGGGGGXXXAXSGKXGG 789
G GG G G RGGGGG G GG
Sbjct: 41 GAGRGGGRGGPRGGGRGGGRGGGGGFKSPRGGGRGG 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,836,567
Number of Sequences: 59808
Number of extensions: 333909
Number of successful extensions: 2757
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2764790632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -