Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C24
         (944 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.62 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.62
 Identities = 23/78 (29%), Positives = 24/78 (30%)
 Frame = +3

Query: 669 PPPPXXXFFXXPPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPLSXXGXXXASPPPXXXX 848
           PPPP       PP +L   PPP              P     P        A PPP    
Sbjct: 533 PPPPGGAVLNIPPQFL---PPPL--NLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP---- 583

Query: 849 XXXXXXXPPXPPXXLPPP 902
                  PP PP   PPP
Sbjct: 584 ------APPPPPPMGPPP 595



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 13/40 (32%), Positives = 14/40 (35%)
 Frame = +1

Query: 823 PPPPPRGPXXXLXXXXPXXPPLXFPHPAXSXLXXXRXPPP 942
           PPPPP GP        P   P     P  + L      PP
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
 Frame = +3

Query: 702 PPHYLXXKPPPXPPXFFXYSXXXGXPXXXPPPL-SXXGXXXASPP 833
           PP      PP  PP         G P    PPL +  G   A+PP
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 14/52 (26%), Positives = 16/52 (30%)
 Frame = -2

Query: 880 GXGGXXXXXXXXXXXGGGEAXXXPXXEXGGGXXXGXPXXXEXXKXXGGXGGG 725
           G GG           GG      P    GGG         +  +  GG GGG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -1

Query: 902 GWGKXXGGXXGXXXXXXXXGPRGGGGG 822
           G G   G   G        GP GGGGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGG 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,360
Number of Sequences: 2352
Number of extensions: 10157
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)