Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_C23
(915 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01985.1 68417.m00265 expressed protein 34 0.11
At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)... 34 0.15
At5g46730.1 68418.m05757 glycine-rich protein 33 0.20
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila... 32 0.46
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 1.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 31 1.4
At1g27710.1 68414.m03387 glycine-rich protein 31 1.4
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 31 1.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.9
At2g05440.2 68415.m00575 glycine-rich protein 30 1.9
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 29 3.2
At2g30560.1 68415.m03722 glycine-rich protein 29 4.3
At4g19200.1 68417.m02833 proline-rich family protein contains pr... 29 4.3
At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)... 29 4.3
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP... 28 7.5
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 28 7.5
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 7.5
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 7.5
At1g62240.1 68414.m07021 expressed protein 28 7.5
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 9.9
At3g50180.1 68416.m05486 hypothetical protein 28 9.9
At3g24330.1 68416.m03055 glycosyl hydrolase family 17 protein si... 28 9.9
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 28 9.9
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 28 9.9
At1g70990.1 68414.m08190 proline-rich family protein 28 9.9
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 28 9.9
At1g04800.1 68414.m00476 glycine-rich protein 28 9.9
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/83 (33%), Positives = 29/83 (34%)
Frame = -2
Query: 878 AXXVXGGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGG 699
A GGG G GG G K G GG G + G I S GG
Sbjct: 144 AGGAIGGGASGGVGGGGKGRGGKSGGGAGGGVG-GGVGAGGGAGGSVGAGGGIG-SGGGG 201
Query: 698 NPRAGGRXXXGGXXXGGXXXGXG 630
AGGR GG GG G G
Sbjct: 202 TVGAGGR-GSGGASGGGGTVGAG 223
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGG G GG GG GG S G G + G + AG
Sbjct: 275 GGGVGGGVGGGVGGSVG-GAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASGGAG 333
Query: 683 GRXXXGGXXXGGXXXGXG 630
G GG GG G G
Sbjct: 334 GSVGAGGGVGGGVGGGVG 351
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/80 (30%), Positives = 26/80 (32%)
Frame = -2
Query: 869 VXGGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPR 690
V GGG G G +GG G A GG A + G G GG
Sbjct: 63 VGGGGGGGGGIGGSGGVGAGGGVGGGAGGAIGGGASGGAGGGGKGRGRKGGGGAGGG--- 119
Query: 689 AGGRXXXGGXXXGGXXXGXG 630
GG GG G G G
Sbjct: 120 VGGGVGAGGGAGGSVGAGGG 139
>At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 176
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGG G GG G GG + G G + GG G
Sbjct: 91 GGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGSYGG 150
Query: 683 GRXXXGGXXXGGXXXGXG 630
GR GG GG G G
Sbjct: 151 GRREGGGGYGGGEGGGYG 168
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/79 (27%), Positives = 25/79 (31%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGG G GG GG +GG + G G GG G
Sbjct: 161 GGGAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSGGG 220
Query: 683 GRXXXGGXXXGGXXXGXGK 627
G GG GG G G+
Sbjct: 221 GAYGGGGAHGGGYGSGGGE 239
Score = 32.3 bits (70), Expect = 0.46
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGG GG AGG G + + GG S G G S GG G
Sbjct: 109 GGGYGGAAGGHAGGGGGGSGGGGGSAYGAGG-EHASGYGNGAGEGGGAGASGYGGGAYGG 167
Query: 683 GRXXXGGXXXGGXXXGXG 630
G GG G G
Sbjct: 168 GGGHGGGGGGGSAGGAHG 185
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGG G GG G G + GG S G G GG G
Sbjct: 166 GGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGGGSGGGGAYGG 225
Query: 683 GRXXXGGXXXGGXXXG 636
G GG GG G
Sbjct: 226 GGAHGGGYGSGGGEGG 241
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGG G GG GG G + GG+ ++ G G G G
Sbjct: 212 GGGGGSGGGGAYGGGGAHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGGEHGG 271
Query: 683 GRXXXGGXXXGGXXXGXG 630
G GG GG G G
Sbjct: 272 G--SGGGHGGGGGHGGGG 287
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/76 (27%), Positives = 22/76 (28%)
Frame = -2
Query: 857 GPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAGGR 678
G G GG GG G GG+ G G GG GG
Sbjct: 204 GGAGGYGGGGGGGSGGGGAYGGGGAHGGGYGSGGGEGGGYGGGAAGGYGGGGGGGEGGG- 262
Query: 677 XXXGGXXXGGXXXGXG 630
GG GG G G
Sbjct: 263 GSYGGEHGGGSGGGHG 278
>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
to RNA-binding protein GB:S46286 from [Nicotiana
sylvestris]
Length = 289
Score = 32.3 bits (70), Expect = 0.46
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = -2
Query: 860 GGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAGG 681
G P G GG AGG A GG+ SS G N GGNP G
Sbjct: 136 GAPAGGYGGGAGGYGGNSSYSGNAG-GGGGYGGNSSYGG--------NAGGYGGNPPYSG 186
Query: 680 RXXXGGXXXGGXXXGXG 630
GG G G G
Sbjct: 187 NAVGGGGGYGSNFGGGG 203
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/89 (25%), Positives = 29/89 (32%)
Frame = +3
Query: 624 LFSXPPXPXPXXPPPXXXXSPXPRIXPXX*XVNXXPXLH*XSXG*SLGPTPKLKXXGXXX 803
++S PP P P PPP P P P V P P P +
Sbjct: 448 VYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPS------PPPPPPPVYSPPPPP 501
Query: 804 XPLXGXPPGXPPSAXFWATPXNXPGPXXT 890
P P PP +++P P P T
Sbjct: 502 PPPPPPPVYSPPPPPVYSSPPPPPSPAPT 530
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 624 LFSXPPXPXPXXPPPXXXXSPXP 692
++S PP P P PPP SP P
Sbjct: 545 IYSSPPPPSPSPPPPYIYSSPPP 567
>At1g27710.1 68414.m03387 glycine-rich protein
Length = 212
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/81 (33%), Positives = 27/81 (33%), Gaps = 3/81 (3%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXX---GGNP 693
GGGP G GG G G FGG A S G L G GG
Sbjct: 109 GGGPGYGGGGYGPGGG---GGGVVIGGGFGGGAGYGSGGGLGWDGGNGGGGPGYGSGGGG 165
Query: 692 RAGGRXXXGGXXXGGXXXGXG 630
GG GG GG G G
Sbjct: 166 IGGGGGIGGGVIIGGGGGGCG 186
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 624 LFSXPPXPXPXXPPPXXXXSPXPRI 698
++S PP P P PPP SP P +
Sbjct: 518 VYSSPPPPPPSPPPPCPESSPPPPV 542
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 627 FSXPPXPXPXXPPPXXXXSPXP 692
+ PP P P PPP SP P
Sbjct: 456 YPPPPPPSPSPPPPYVYSSPPP 477
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/94 (26%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +3
Query: 618 LILFSXPPXPXPXXPPPXXXXSPXPRIXPXX*XVNXXPXLH*XSXG*SLGPTPKLKXXG- 794
+++ S P P P PP SP P I P S P G
Sbjct: 408 VVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIVPSPPSTTPSPGS 467
Query: 795 XXXXPLXGXPPGXPPSAXFWATPXNXPGPXXTXP 896
P P G PPS+ TP P T P
Sbjct: 468 PPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTP 501
>At2g05440.2 68415.m00575 glycine-rich protein
Length = 154
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/78 (28%), Positives = 25/78 (32%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGG G GG GG +GG G G + GG+ G
Sbjct: 54 GGGGGHGHGGHNGGGGHGLDGYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGGG 113
Query: 683 GRXXXGGXXXGGXXXGXG 630
G GG GG G G
Sbjct: 114 GGGHGGGGHYGGGGGGYG 131
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/78 (28%), Positives = 25/78 (32%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
GGGP G AGG G P GG G G + GG + G
Sbjct: 291 GGGP-----GPAGGKIEGKGMPFPVQMGGGGGGPGGKKGGPGGGGGNMGNQNQGGGGKNG 345
Query: 683 GRXXXGGXXXGGXXXGXG 630
G+ G G G G
Sbjct: 346 GKGGGGHPLDGKMGGGGG 363
>At2g30560.1 68415.m03722 glycine-rich protein
Length = 171
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/83 (27%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPA-----XFKFGGWAQTSSXGXLMXXGXXINPSXXGG 699
GGG K G GG GG G + F+ + G G I+ GG
Sbjct: 38 GGGGKSGGGGGGGGYMVAPGSNRSSYISRDNFESDPKGGSGGGGKGGGGGGGISGGGAGG 97
Query: 698 NPRAGGRXXXGGXXXGGXXXGXG 630
GG GG G G G
Sbjct: 98 KSGCGGGKSGGGGGGGKNGGGCG 120
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 863 GGGPKXGXGGXAGG 822
GGG K G GG +GG
Sbjct: 10 GGGGKGGGGGGSGG 23
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 704 GGNPRAGGRXXXGGXXXGGXXXGXGK 627
GG GGR GG G G GK
Sbjct: 17 GGGGSGGGRGGGGGGGAKGGCGGGGK 42
>At4g19200.1 68417.m02833 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 179
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 622 YYFPXPXXXPPXXXPPXXXRPPARGXPP 705
+Y P PP PP PPA G PP
Sbjct: 24 HYPPAQGGYPPQGYPPQQGYPPAGGYPP 51
>At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 159
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = -2
Query: 776 GGWAQTSSXGXLMXXGXXINPSXXGGNPRAGGRXXXGGXXXGGXXXGXG 630
GG + G G + GG GGR GG GG G G
Sbjct: 103 GGGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYG 151
>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 169
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/78 (25%), Positives = 25/78 (32%)
Frame = -2
Query: 863 GGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPRAG 684
G G G G +GG G + GG++ G G + GG G
Sbjct: 86 GSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGG 145
Query: 683 GRXXXGGXXXGGXXXGXG 630
G GG GG G
Sbjct: 146 GGRREGGGYGGGDGGSYG 163
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = -2
Query: 860 GGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGN-PRAG 684
GG GG GG G GG G + G + GG P AG
Sbjct: 311 GGMGGMPGGFPGGMGGMGGMPGGFPGGMGGGMPAGMGGGMPGMGGGMPAGMGGGGMPGAG 370
Query: 683 GRXXXGGXXXGG 648
G GG GG
Sbjct: 371 GGMPGGGGMPGG 382
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 636 PPXPXPXXPPPXXXXSPXPRIXP 704
PP P P PPP P P + P
Sbjct: 389 PPPPPPPPPPPPPPPPPPPYVYP 411
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/98 (24%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Frame = +3
Query: 630 SXPPXPXPXXPPPXXXXSPXPRIXPXX*XVNXXPXLH*XSXG*SLGPTPKLKXXGXXXXP 809
S PP P PPP P P P + P +H P P + P
Sbjct: 646 SPPPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPPPVH---SPPPP 702
Query: 810 LXGXPP---GXPPSAXFWATPXNXPGPXXTXPXXXXXF 914
+ PP PP P + P P P F
Sbjct: 703 VHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPPVF 740
>At1g62240.1 68414.m07021 expressed protein
Length = 227
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/80 (28%), Positives = 26/80 (32%)
Frame = -2
Query: 869 VXGGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPR 690
V GGG G GG GG G G+ S G + G + S GG
Sbjct: 94 VGGGGGGGGGGGGGGGSGGSNGSFFNGSGSGTGYG--SGDGRVSSSG-EYSASAGGGGSG 150
Query: 689 AGGRXXXGGXXXGGXXXGXG 630
G GG G G G
Sbjct: 151 EGSGGGGGGDGSSGSGSGSG 170
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 624 LFSXPPXPXPXXPPPXXXXSPXPRIXPXX*XVNXXP 731
++S PP P P PP SP P + V+ P
Sbjct: 555 VYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPP 590
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 639 PXPXPXXPPPXXXXSPXPRIXP 704
P P P PPP P PR+ P
Sbjct: 25 PPPQPPPPPPPPPPPPPPRLGP 46
>At3g24330.1 68416.m03055 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 500
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = -1
Query: 408 FR*DLRSFKLEIHNYLQ-----YCFKLNASLVLYHEVYFPKDFA 292
FR +LR +EI N+L + + L LY YFP DFA
Sbjct: 192 FRPELRDATIEIINFLYSHDSPFTVNIYPFLSLYGNAYFPLDFA 235
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 631 PXPXXXPPXXXPPXXXRPP-ARGXPPLXXGLIXLPXXIXNPLDEVWAQPP 777
P P PP PP PP A PP+ P + P A PP
Sbjct: 71 PPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPP 120
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 631 PXPXXXPPXXXPPXXXRPP-ARGXPPLXXGLIXLPXXIXNPLDEVWAQPP 777
P P PP PP PP A PP+ P + P A PP
Sbjct: 71 PPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPP 120
>At1g70990.1 68414.m08190 proline-rich family protein
Length = 176
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 636 PPXPXPXXPPPXXXXSPXPRIXP 704
PP P P PPP P P + P
Sbjct: 93 PPSPPPPSPPPPSQACPPPPLPP 115
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 636 PPXPXPXXPPPXXXXSPXPRIXP 704
PP P P PPP SP P P
Sbjct: 73 PPSPPPCPPPPSPPPSPPPPQLP 95
>At1g04800.1 68414.m00476 glycine-rich protein
Length = 200
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/81 (25%), Positives = 27/81 (33%)
Frame = -2
Query: 869 VXGGGPKXGXGGXAGGXXXKXGXXXPAXFKFGGWAQTSSXGXLMXXGXXINPSXXGGNPR 690
+ GGG GG GG G F GG+ + G G ++ G
Sbjct: 62 ISGGGGFGAGGGWIGGSVGGFGGGIGGGFGGGGFGGGAGKGVDGGFGKGVDGGAGKGVDG 121
Query: 689 AGGRXXXGGXXXGGXXXGXGK 627
G+ GG G G GK
Sbjct: 122 GAGKGFDGGVGK-GVDGGAGK 141
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,533,826
Number of Sequences: 28952
Number of extensions: 290654
Number of successful extensions: 2240
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1771
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2168774904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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