Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C22
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon ge...    29   6.0  
AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.      29   6.0  
Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z66524-7|CAA91419.2|  626|Caenorhabditis elegans Hypothetical
           protein T13H5.3 protein.
          Length = 626

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +3

Query: 510 LKQYGFDGIXLAWQFP 557
           +K+YGFDG+ + W++P
Sbjct: 130 IKEYGFDGVDIDWEYP 145


>U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon gene
           protein 1 protein.
          Length = 892

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 507 NSTPELMKPVRAXCDSSRRLYFSVSSVSASPPTDNNTVRP 388
           ++  EL  P  + CD   RL+ ++SS+  +  TD+N +RP
Sbjct: 503 SAVDELPPPSTSGCDG--RLFDALSSIIKAVGTDDNRIRP 540


>AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.
          Length = 885

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 507 NSTPELMKPVRAXCDSSRRLYFSVSSVSASPPTDNNTVRP 388
           ++  EL  P  + CD   RL+ ++SS+  +  TD+N +RP
Sbjct: 496 SAVDELPPPSTSGCDG--RLFDALSSIIKAVGTDDNRIRP 533


>Z70035-9|CAA93870.2|  450|Caenorhabditis elegans Hypothetical
           protein R09D1.10 protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +3

Query: 507 WLKQYGFDGIXLAWQFPRVK 566
           +LK+Y  DG+ L W++PR++
Sbjct: 179 FLKKYDIDGVDLFWKWPRLE 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,511,196
Number of Sequences: 27780
Number of extensions: 326125
Number of successful extensions: 646
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)