Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C21
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.79 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    25   1.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   3.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   4.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   4.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   4.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   7.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   7.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   7.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.7  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 12/40 (30%), Positives = 12/40 (30%)
 Frame = +3

Query: 639 PPXXPPPXPPPPPPXXXPPXXPXPPPPPXPXPPXPXPXAP 758
           PP    P P    P         P  PP P PP      P
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 15  RPHYREFLRFDNLNLRQRVQHGSLLLAVIRCI 110
           RP  +  +++DN+NL++ +Q   L    + C+
Sbjct: 18  RPEDQYTIKYDNVNLKEILQSDRLTENYVNCL 49


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 663 PPPPPPXXXPPXXPXPPPP 719
           PPPP P   PP  P    P
Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 663 PPPPPPXXXPPXXPXPPPP 719
           PPPP P   PP  P    P
Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 727 PXPPPXPPXPPXXPPLXGGVXGAP 798
           P  PP  P P     L GG+ G P
Sbjct: 72  PHGPPYAPHPSLSSGLGGGLSGMP 95


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/38 (31%), Positives = 13/38 (34%)
 Frame = +3

Query: 636 SPPXXPPPXPPPPPPXXXPPXXPXPPPPPXPXPPXPXP 749
           +P    P    PP         P P  PP P PP   P
Sbjct: 154 NPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAP 191


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/38 (31%), Positives = 13/38 (34%)
 Frame = +3

Query: 636 SPPXXPPPXPPPPPPXXXPPXXPXPPPPPXPXPPXPXP 749
           +P    P    PP         P P  PP P PP   P
Sbjct: 154 NPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 216 LTVDCATSRKGKTRRFLSTLHHNSLQLSSR 305
           LT +CAT  +      + TLHH+  +L +R
Sbjct: 562 LTKNCATKAQSVVLGRICTLHHHLSKLVTR 591


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 222 VDCATSRKGKTRRFLSTLHHNSLQLSSRP 308
           + CA +  GKT  F+  + HN L   + P
Sbjct: 199 MSCAQTGSGKTAAFMLPIIHNLLSDKNPP 227



 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -1

Query: 742 GXGGXGXGGGGGXGXXGGXXXGGG 671
           G      GGG G G  G    GGG
Sbjct: 85  GENNDDSGGGRGGGRDGDRGDGGG 108


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 308 GLFGLKNGAEIPFDALYNADACTLTSCPTEAGKTQTL 418
           G+ G+KN +   FD ++ +  CT   C  EA KT  L
Sbjct: 136 GIVGVKNASLFIFDLIFLSFRCT-KLC-KEANKTAFL 170


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +3

Query: 666 PPPPPXXXPPXXPXPPPPPXPXPPXPXPXAPP 761
           PPPPP          P P    PP   P   P
Sbjct: 163 PPPPPVYTHHYARYHPYPNFGVPPAGIPLQNP 194


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 380 TSCPTEAGKTQTLDFSFAYW 439
           +S     GKT  LD+ F +W
Sbjct: 311 SSSEENEGKTTQLDYFFTFW 330


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 380 TSCPTEAGKTQTLDFSFAYW 439
           +S     GKT  LD+ F +W
Sbjct: 311 SSSEENEGKTTQLDYFFTFW 330


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 675 PPXXXPPXXPXPPPPPXP 728
           P    PP  P P PP  P
Sbjct: 110 PSGNVPPLTPSPGPPSHP 127


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 711 PPPPXPXPPXPXPXAPP 761
           P P  P  P P P A P
Sbjct: 82  PDPEIPVAPEPAPLASP 98


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 15/57 (26%), Positives = 17/57 (29%)
 Frame = +1

Query: 610 IPDKXXKXIPXPXXPXPXXPXPPPXXXPPXXPXPPXXXPPXPPPXPPXPPXXPPLXG 780
           IP +  K  P    P P           P     P    P PP  P      PP+ G
Sbjct: 384 IPSEGIKVEPRDKAPSPYGGQ---MFEAPIPNVSPHYVTPTPPEAPLFQNVLPPIGG 437


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 642 PXXPPPXPPPPPPXXXP 692
           P  P P PP  PP   P
Sbjct: 23  PHSPEPYPPRCPPIYEP 39


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/32 (34%), Positives = 11/32 (34%)
 Frame = +3

Query: 672 PPPXXXPPXXPXPPPPPXPXPPXPXPXAPPXS 767
           P P   P      PPP    PP     A P S
Sbjct: 267 PYPMQRPKSASLSPPPHVYNPPDHIQQATPYS 298


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/39 (28%), Positives = 11/39 (28%)
 Frame = +3

Query: 633 DSPPXXPPPXPPPPPPXXXPPXXPXPPPPPXPXPPXPXP 749
           D P   PPP P        P   P         PP   P
Sbjct: 208 DVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFNLPPGAIP 246


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 15  RPHYREFLRFDNLNLRQRVQHGSLLLAVIRCI 110
           RP  +   ++DN++L + ++   LL     C+
Sbjct: 19  RPQEKYTTKYDNIDLEEILKSDRLLKNYFNCL 50


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
 Frame = -1

Query: 676 GGGGGXGGG---XXGGESS 629
           GGGGG G G     GG SS
Sbjct: 524 GGGGGSGSGNNQPPGGPSS 542


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,356
Number of Sequences: 336
Number of extensions: 5188
Number of successful extensions: 41
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)