Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C19
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   229   8e-62
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.4  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  229 bits (560), Expect = 8e-62
 Identities = 107/168 (63%), Positives = 121/168 (72%)
 Frame = +1

Query: 109 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 288
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK    
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 289 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 468
                              TYGKPKSHGVNQLKP R LQS+AEE            +SYW
Sbjct: 61  IFRIRVRCGGRKRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYW 120

Query: 469 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAG 612
           VAQD+++KYFEVI+VDP + AIRRDP +NWI NAVHKHRE+RGLTSAG
Sbjct: 121 VAQDAAHKYFEVIMVDPPNNAIRRDPNVNWICNAVHKHRELRGLTSAG 168



 Score = 31.9 bits (69), Expect = 0.024
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 626 GLGKGHRYSQTXGGSXRGS 682
           GLGK +RYSQT GGS R +
Sbjct: 173 GLGKAYRYSQTIGGSRRAA 191


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 58   LLRFTVGHARRLPQAAKMGAYRYI 129
            LLR  +    RLPQ A    Y YI
Sbjct: 1942 LLRHLIRFVPRLPQQAAFALYNYI 1965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,926
Number of Sequences: 2352
Number of extensions: 17661
Number of successful extensions: 45
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)