Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_C16
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.7  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   8.5  
02_05_1096 + 34089572-34089880,34090405-34090470,34090723-340909...    28   8.5  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 261  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 359
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 625 DEKICYNYGIIKENEQFVM 681
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


>02_05_1096 +
           34089572-34089880,34090405-34090470,34090723-34090903,
           34091164-34091360,34091484-34091534,34091609-34091700,
           34092234-34092246,34092278-34092349,34092970-34093048,
           34093092-34093174,34093568-34093711
          Length = 428

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
 Frame = -3

Query: 759 AQHLQLSKQFGLRCWG*VRELE*LGVHYELFVFFDNSV---IITYFLVKATIHHLNVVHF 589
           AQ  +  ++F         E E  G   E+ +  DN +   IIT FL       LN    
Sbjct: 53  AQSWRARRRFAASAASTTTEEEEEGAGAEVMIPPDNRIPATIITGFLGSGKTTLLN---H 109

Query: 588 IFNFHVDKILRISFVWSR*NEVGGVGALDNSYVVGV*EHSLVHVDSGVACCFVETFKIFG 409
           I   H  K  RI+ + +   EV   G+L  +   G     ++ +++G  CC V    +  
Sbjct: 110 ILTAHHGK--RIAVIENEYGEVDIDGSLVAAQTAGA--EDIMMLNNGCLCCTVRGDLVRM 165

Query: 408 IIEQLEQRDGFFPHFFVK 355
           I E ++++ G F H  ++
Sbjct: 166 IGELVDKKKGKFDHIIIE 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,950,880
Number of Sequences: 37544
Number of extensions: 405982
Number of successful extensions: 943
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)